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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100029g15.9553.mrna |
| Orig protein id | gnl|cribi|Naga_100029g15.9553 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:570239..572509 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1410 ID=rna1410|Name=rna1410|organism=Nannochloropsis gaditana|type=mRNA|length=1032bp
ATGACAATTGGACTGGTTCGGGCATCTAGGTCAATAATTTGGACCGGCGC
TGGGGCCAGGGCATGCCAAGCTTTGGAGCACAGGGCGCCTCGCAAGCCTT
GGGGGTTGCAGCCTGCGGGGGTCAGCATGCGGAGCGTCGCCAGTGATTCT
CGGGTGCTATGCATCACGTCCGGTAAAGGCGGCGTGGGGAAAACGACGAC
AGCAGCCAGCATTGGGATGGGTCTGGCTTTGAAGGGAAAGAAAACCTGCG
TTATCGATTTCGATATAGGCCTCCGCAACTTGGACATTCACTTGGGCGCG
GAACGACGAGTAATATTCGACTTCGTCCACGTGCTGCAGGGGGACTGCAC
GCTCAAGCAGGCGATGATCAAGGACAAGCGGAACCCGAACCTTTTCCTGC
TCGCGGCCTCCCAGACCAAGGATAAGAACGCCTTGACCGTGGACGCAGTC
GGCAAGATGCTGGCAGAGATGCGCCGTGAGTTCGACTTTATCATCTGCGA
CTCTCCCGCCGGGATCGAGAGCGGGGCCAGGCACGCCATGTACTTCGCGG
ACGACGCCATCATCGTGACGAATCCGGAGCTCAGCTCTTGTCGCGACAGC
GACAAGATGATAGGCTTCATTTCCAGCAGATCGAAACGGGCGGAGCTCGG
GCAAGAGCCTGTGCGCCAGTCTCTCCTTGTCACGCGCTACGACCCCGAGC
GCGCCCAGAAGGAGGAGTGCCTGCGTCTGGAGGACATCAAGGAACTACTG
GGGCTGGAGCTGCTGGGCGTGATCCCGGAGAGCAAGTGCATCCTCACGGC
CACCAACCTGGGCCAGCCGGTCATCTGCATGCCCGATCAGGACGCCGGTC
AAGCCTACATGGACACCGTGGAGCGCTTTCTCGGCGAGGAGAAAGAATTC
CGCTTCCTATCCCCCAGGCCGACGGGCATCCTCTCGATGCTTTTCTCGCG
CGGCACCGAGCGGGCTCGTAGTGCTGCCTACCTGATACTGTACGTATTAA
GTTCGTTTTATGTCCGCGATCAGACCTACTGA back to topprotein sequence of rna1410 >rna1410-protein ID=rna1410-protein|Name=rna1410|organism=Nannochloropsis gaditana|type=polypeptide|length=135bp
MLYRGTPQRYHAEFGVLLRYPSSSPPGHRDGEGAGDGGRRLTWRDLHLLY
RLIGVSAGVCLPVHFNSGSCLWSAVAAFFLSCRIIPSLRSRLAPPPPHKG
GAQDVDPRPYPIGSGGRGRGWGGAATGGGGRGQSG back to topmRNA from alignment at CM002457.1:570239..572509+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1410 ID=rna1410|Name=rna1410|organism=Nannochloropsis gaditana|type=mRNA|length=2271bp|location=Sequence derived from alignment at CM002457.1:570239..572509+ (Nannochloropsis gaditana)
TCACAGTTGCGTCATACATAAGCCATCCTACTTCTCATGAAGCACCGCGG
AAATTCCATAGACTTGAGCCTTCCAGGGAGCGCGCCATAGCAAGCAGCAC
GGTTCAAAgctaacctcccccccgccccactGCATTCCTGTACAGCACAA
GCCTGGACTCGCAGCTTACACTCCAGTCGAATGACAACGCGATATTACTA
GAGCATAGCACtatggaaggagaagagcaagtATGCGCAGGTGCTGGGGG
CACGAGTGCGGAGAATGTGACGACCGACGAGGCTGTCATCTCGCCAGATG
TGCAAGTTGGTGCACCGCCTCCGGCCACTCCCGCCAATCCGGTGGAATAT
CAGGAAACTTGCCCAGCTGAAGGTACTGATGAGGTGCTAGAAGATAAAAA
GCCAGCCACCACGGCCGGTGCCGTCTCCGAAGCCGTCACCGGGCGCCTCA
CTCCATCGACACAACGATACGTCCTCCACGGGACCCTGATTGGGCTTTTC
GTTGTCGTAGACCCTGCTATACAATGGTTGGTACAAAGAGGGACACAGAG
GCTATGACTGCTGATGCGCGTTTACGTTTATTTCTCAGCTCGAGTCCCCA
TATCGACTGTTGACGCCTTCATTTCTCCCCGTCAGTGCGAAGATGAGTGT
AAAGCGGGAGCTCGAAACGCTGGGCGTCTTTCAAAGGGTATGTAAATGTT
GCACATATCAGTGGCATCATTTGGCCATCCTCACCCGTTTTGGTGTAACC
TTGCACTCCAGGACGTGGGCCCGACGGAGGAGGTACAGCTCTCTCTCGAG
CAGGCCTTCTATCTGGTATATGACCTCGACCGCCTCCGCGTCTGCCTGCC
ACCGGGCGACGGTCGATGGAGGGGATTTggggagaaaaaagaagTGGAAG
GGGGTTATATTGAAGAGTCGCGAGGCCTGGGAgcagaggcggcggccgat
gAGAGGGGGGACAAAGGAGCGGTTGGAGATGGGCAGGCGCAGGCAAGGCC
CTTGAGTGCGATCGAGTGCTGGAAAGCGTACGTATCTTTTGGCATTGCAA
AATATACATCTACACGTGTGTATATAAGTGATTTGCCATCATGCCCACCT
TGATCCCTTGCGTCTCCTTTCTTCAGCTTTCGGGCCGCCAGTCCCACCTT
CCTCAGGAGTGTGGGTAGCTACCGGTTCTTCAGGAAGCGCGGGTGCGTAT
TTACGATCAAGCGGTGGGCAAGTTGTGAGGCCAGGAGTAAGGTTAAGGAT
CAATTAACCAGGCTGTGCCTTTTTGGCTGTGCCATTTTGGATGTTGAGAC
ATCTGGCCCTTGGCATTGTTCCACCACATGcgcacttccctccctcactc
gccgcccctcctgtcccaCCCCTGCCTCGCAGCTTCGTCGTCCACGGAGG
CCTGAACCTGGGTCTGGACTTCATGCTCTACCGAGGCACCCCACAGCGCT
ACCACGCCGAGTTCGGTGTCCTGCTCCGGTATCCATCCTCATCCCCACCC
GGCCATCgggacggcgagggagccGGAGACGGGGGGCGTCGGTTGACCTG
GCGGGACCTGCACCTCCTCTACCGGCTCATTGGGGTCAGTGCCGGCGTAT
GCCTTCCTGTTCATTTCAACTCGGGCAGCTGCCTATGGTCAGCCGTCGCG
GCATTTTTTCTGTCGTGTCGTATTATCCCCAGCCTTCGCTcacgcctcgc
cccccctcccccacacaAAGGAGGTGCGCAAGACGTTGATCCTCGGCCAT
ATCCGATTGGGTcgggcggacgagggagaggatgggggggggctgcgacc
ggcggggggggccggggccagTCGGgctgagggagaagatggcaGTAGCG
AGGTGGGCCGTGGGGATCAGGGGGCGGAacgaggcgaggaagagggggag
gaggaggattgcGAGGTGCGTCGCGAGATAAGACAGTGGTACAGTGGGTT
AAGTGTATATGAGGTGGCAGTGACgccgtggcgggggggaaccCCGCTAG
CCCGATCGAAGCTcagcaaaaagaaaagcgaggcTGCTCAGatcaagggg
ggggcgggtgggggggctggcagtgggaagaagagaagaaggggaggggg
ggaaggtgggcgaGAGAGTGCGGCGAGTGGCGAGAAGCATGTGAATAGGC
AGCAGAATGCGTGACAACAAAGGCAAAGCATTTCGGAAAGGTTTCAAGAA
GACGGCTGCTCTTTTTCAAGTGTGTACTTTCAGCCACCCACTTTTGACCA
GTACCAGACGCATTATTCGAC back to topCoding sequence (CDS) from alignment at CM002457.1:570239..572509+ >rna1410 ID=rna1410|Name=rna1410|organism=Nannochloropsis gaditana|type=CDS|length=408bp|location=Sequence derived from alignment at CM002457.1:570239..572509+ (Nannochloropsis gaditana)
ATGCTCTACCGAGGCACCCCACAGCGCTACCACGCCGAGTTCGGTGTCCT
GCTCCGGTATCCATCCTCATCCCCACCCGGCCATCgggacggcgagggag
ccGGAGACGGGGGGCGTCGGTTGACCTGGCGGGACCTGCACCTCCTCTAC
CGGCTCATTGGGGTCAGTGCCGGCGTATGCCTTCCTGTTCATTTCAACTC
GGGCAGCTGCCTATGGTCAGCCGTCGCGGCATTTTTTCTGTCGTGTCGTA
TTATCCCCAGCCTTCGCTcacgcctcgccccccctcccccacacaAAGGA
GGTGCGCAAGACGTTGATCCTCGGCCATATCCGATTGGGTcgggcggacg
agggagaggatgggggggggctgcgaccggcggggggggccggggccagT
CGGgctga back to top
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