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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100152g2.720.mrna |
| Orig protein id | gnl|cribi|Naga_100152g2.720 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:441994..442867 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1363 ID=rna1363|Name=rna1363|organism=Nannochloropsis gaditana|type=mRNA|length=988bp
TTCACCCACTCCCGTGTGCTTGTGTCCACTGAGCCTCTCTATGGTCTTTT
CTCGTCACAGTGATCAGACTTCGGCTGCTTTCCGAATTAATTCCTCTCCT
TCGGCGGCCGTACTGCTGAACGCGCTCCATCCCGACGAGGCCCGTGCATG
CCCAGGAAGTGGACTGGATTGAACCTTGCGTCCACCAGCCTTTTCTTCGT
CACACTTTCAGCTTGCTTGCTTCAGGTCGTTTTCACCAGCAACATGTTCG
GAGTCACAGTGAAAAACAGCGGTATGACAGGAACCGGAACTACCGCAGGT
CCCACGAAACGCACACATTCCCCAATGGTTACCGGAACCTCGGTCCTGGG
CGTGAAGTACAACGGTGGAGTCATGTTGGCGGCCGACACCTTGGCCTCGT
ACGGCTCCTTGGCGCGCTTCAAGGATGTCACTCGTCTGAATGCAGTGGGG
GACTACACGATCCTGGGCGCGGGGGGAGAGTTCTCGGATTTCCAAGCCAT
ACAGGAGATACTGGAGAAGATGGACCAGGAGGATAAAAATGCAGACGATG
GGTTTTCGCACTCGCCAGCGGAGCTTTTCAACTACTTGCGGGCGATCTTC
TATAGCAAGCGGAATAAGTTCAATCCGTTGTGGAATGAGGTCCTGGTTGG
CGGTTTCAAGGACGGGAAGGCCTTCCTCGGTCATTTGGACATGATCGGCA
CCGCCTTCTCGGACGAGGTGATGGCCACCGGCTTCGGGTCCTACCTAGCC
TTGCCCATCATGCGGAAGCGGTGGCACGCGAACATGACAGAGGGGGAGGC
GCGGGCCCTGTTGGAGGATTGCATGCGCGTCTTATTCTACCGGTGGGGGC
CGCGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGGAGAGGGAGGGAGGTTG
GAAGGAGCGAAGCAACCGAGGACACAAAAAGTGGAGCTGTATTTTTGACC
ACCACCGACGGCGGCATCTCGCACTCGCTCAGCTTGCC back to topprotein sequence of rna1363 >rna1363-protein ID=rna1363-protein|Name=rna1363|organism=Nannochloropsis gaditana|type=polypeptide|length=198bp
MWWTYQTSGATCLIQSPGELCKVVVAPFFDSSSRPVSSSTVLGPPIYMNP
ETCCKCGSLDIITGPDNASINQRNETRFLLELLSWMQALLGLSKDANCIF
PLNCSEARLQREARYAKPPYPHLPRPPRASDNVDGNRNKRGKKNLPSHPN
LVVPYNVTAPPRWARKVTPPPFVVTQSCVDLSCLSPALTGRALCTEHI back to topmRNA from alignment at CM002457.1:441994..442867+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1363 ID=rna1363|Name=rna1363|organism=Nannochloropsis gaditana|type=mRNA|length=874bp|location=Sequence derived from alignment at CM002457.1:441994..442867+ (Nannochloropsis gaditana)
ATGTGGTGTGCGTCAGGGTGCTAGGGGCCGGCGTCTGGTTTTGTAAGAGG
CGACTATCCTCCCGCGCCCACCCACTGGCTTCTGACACCTCCACAAGCCA
GCttggctttccttcttgcGTCGCACGTTGCACGCCCTTGACTCCTATCA
TATTTCTCATCTTTACGCCCTTCTTTACAGGGACTTATCAGACGTCAGGT
GCCACGTGTCTCATCCAGTCTCCGGGGGAGCTCTGCAAAGTAGTTGTGGC
GCCGTTTTTcgattcttcctcccgccctgtaTCCTCGTCGACCGTCTTGG
GTCCACCTATCTACATGAATCCAGAGACGTGCTGCAAATGTGGAAGTCTT
GATATAATAACAGGTCCGTGCTGAATTCCTTCGTGGCGTGGCCAGCGCCG
GTGTTGGTGGGTCGTCTCCTCGTGGAcacccgcttcccccctcccctccc
cctcccctctttccggTTAAGGGACAACGCGTCGATAAATCAACGAAATG
AAACGCGCTTTCTCCTCGAATTGCTGTCTTGGATGCAGGCGCTACTGGGA
TTATCCAAGGATGCGAATTGTATCTTTCCCCTCAATTGTTCCGAGGCAAG
ACTTCAAAGAGAAGCTCGTTATGCAAAGCCCCCCTACCCACACTTACCGC
GTCCACCGCGCGCCAGCGACAATGTCGACGGCAACAGAAacaaaagagga
aaaaaaaatctcccttcccacccgaACCTCGTCGTTCCCTACAATgtcac
cgcccccccccggtggGCTCGAAAAgtaaccccccccccctttgttGTCA
CGCAATCATGCGTGGACCTTTCCTGTCTCTCGCCTGCCCTGACTGGACGC
GCCCTGTGCACTGAACACATTTGA back to topCoding sequence (CDS) from alignment at CM002457.1:441994..442867+ >rna1363 ID=rna1363|Name=rna1363|organism=Nannochloropsis gaditana|type=CDS|length=1791bp|location=Sequence derived from alignment at CM002457.1:441994..442867+ (Nannochloropsis gaditana)
ATGTGGTGGACTTATCAGACGTCAGGTGCCACGTGTCTCATCCAGTCTCC
GGGGGAGCTCTGCAAAGTAGTTGTGGCGCCGTTTTTcgattcttcctccc
gccctgtaTCCTCGTCGACCGTCTTGGGTCCACCTATCTACATGAATCCA
GAGACGTGCTGCAAATGTGGAAGTCTTGATATAATAACAGGTCCGGACAA
CGCGTCGATAAATCAACGAAATGAAACGCGCTTTCTCCTCGAATTGCTGT
CTTGGATGCAGGCGCTACTGGGATTATCCAAGGATGCGAATTGTATCTTT
CCCCTCAATTGTTCCGAGGCAAGACTTCAAAGAGAAGCTCGTTATGCAAA
GCCCCCCTACCCACACTTACCGCGTCCACCGCGCGCCAGCGACAATGTCG
ACGGCAACAGAAacaaaagaggaaaaaaaaatctcccttcccacccgaAC
CTCGTCGTTCCCTACAATgtcaccgcccccccccggtggGCTCGAAAAgt
aaccccccccccctttgttGTCACGCAATCATGCGTGGACCTTTCCTGTC
TCTCGCCTGCCCTGACTGGACGCGCCCTGTGCACTGAACACATTTGAATG
TGGTGGACTTATCAGACGTCAGGTGCCACGTGTCTCATCCAGTCTCCGGG
GGAGCTCTGCAAAGTAGTTGTGGCGCCGTTTTTcgattcttcctcccgcc
ctgtaTCCTCGTCGACCGTCTTGGGTCCACCTATCTACATGAATCCAGAG
ACGTGCTGCAAATGTGGAAGTCTTGATATAATAACAGGTCCGGACAACGC
GTCGATAAATCAACGAAATGAAACGCGCTTTCTCCTCGAATTGCTGTCTT
GGATGCAGGCGCTACTGGGATTATCCAAGGATGCGAATTGTATCTTTCCC
CTCAATTGTTCCGAGGCAAGACTTCAAAGAGAAGCTCGTTATGCAAAGCC
CCCCTACCCACACTTACCGCGTCCACCGCGCGCCAGCGACAATGTCGACG
GCAACAGAAacaaaagaggaaaaaaaaatctcccttcccacccgaACCTC
GTCGTTCCCTACAATgtcaccgcccccccccggtggGCTCGAAAAgtaac
cccccccccctttgttGTCACGCAATCATGCGTGGACCTTTCCTGTCTCT
CGCCTGCCCTGACTGGACGCGCCCTGTGCACTGAACACATTTGAATGTGG
TGGACTTATCAGACGTCAGGTGCCACGTGTCTCATCCAGTCTCCGGGGGA
GCTCTGCAAAGTAGTTGTGGCGCCGTTTTTcgattcttcctcccgccctg
taTCCTCGTCGACCGTCTTGGGTCCACCTATCTACATGAATCCAGAGACG
TGCTGCAAATGTGGAAGTCTTGATATAATAACAGGTCCGGACAACGCGTC
GATAAATCAACGAAATGAAACGCGCTTTCTCCTCGAATTGCTGTCTTGGA
TGCAGGCGCTACTGGGATTATCCAAGGATGCGAATTGTATCTTTCCCCTC
AATTGTTCCGAGGCAAGACTTCAAAGAGAAGCTCGTTATGCAAAGCCCCC
CTACCCACACTTACCGCGTCCACCGCGCGCCAGCGACAATGTCGACGGCA
ACAGAAacaaaagaggaaaaaaaaatctcccttcccacccgaACCTCGTC
GTTCCCTACAATgtcaccgcccccccccggtggGCTCGAAAAgtaacccc
ccccccctttgttGTCACGCAATCATGCGTGGACCTTTCCTGTCTCTCGC
CTGCCCTGACTGGACGCGCCCTGTGCACTGAACACATTTGA back to top
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