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Properties
| Property Name | Value |
|---|
| Product | binding protein |
| Orig transcript id | gnl|cribi|Naga_100136g10.3174.mrna |
| Orig protein id | gnl|cribi|Naga_100136g10.3174 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:420468..421638 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1352 ID=rna1352|Name=rna1352|organism=Nannochloropsis gaditana|type=mRNA|length=2119bp
CAGGTCCTGTCGCAAAGTGACAAGCCTTTGCACGCCCGGTACGCACAGAG
TGTCTTCCCTCGTGCCTTAGGAGGGGTCAATACAGCCATTATTGACTGTT
CACATGAGAAGCTACCCACAACACGTTGCACTCTCGCCGATTCTGCTTCA
AAAGCAACATCATCATGGTAGTGGGCCAACACCCTTTCTCTGTCGTCGCT
TCTCACACCATACGCCCCATATTATACGGCAAATACACAAAAAAAGAAAT
GTTCAAAGTTTTCGCCTCCTCTACCACCGGGTCGTCGGCCAAAGCAATCT
CAGTGGCGCATCAGCAGTTTGTGCAGCGGGGTCTTTCCTCCCTAAAATCC
CTCCGAAAGCGTCTCGTGCTTGTAAACGTCATTTTGACCTTTCTTCTTCT
TGCATTAGCGTTGGAATCTCGCAGACAAGGGCGTCGTCATCGTCTCTCCA
GAATTCTTTGGAACCTGTATCTCAAAGTACAGCGTTTCATATGGCCCTGG
CAGGAGCGTTTGGTACGACTGCAAGGACTGAATGCGGGCTCGCGATTACT
TTGGGCTAGCACTGGCAAATGCAAGGCTTTCTCCTGTGTCTTCTTTTGGG
GAGGCGCAGAGGATGAGGATGGGGGGTTGAAGGCGTCGTTGAGTACCGGC
GATGGAGATGGAGGACAATGCACGCGCAAAGTGGTCCTAGGAGATCGGGG
TCGGGCCCGTTGTTCCTGGATGGTGCGACAGCAATTTTTGCGGCGCGCGT
ACTGTGACGTGTCCTTCGTCGTAGAAGGGAAGACATTCCCTGCGCACCGA
TGCTGGGTGGCGGCCTTCAGCTTGCCTCTGTGCGCCATGTTCAACAGTGG
GATGCGGGAGAGCCAGGAGTCTTGCATCCTCTTGCGGGACACGGACGCAG
GGGCCTTCGAGCTCATGCTCAATTTTATATATGGAGGACCTGTCGAACTT
AACCAAGACAACATCGAGTCCGTCCTTGAGCTTTCGGTCAGGTTTGCCGT
CGGCATGCTTATGGAGCAATGTTGTAATTTTTTGGCCTCGGCCGTGGCCG
TTGACACCGCCTGCGCCATATTAATCCTTGCCGACAGATACGACTGTCGG
CCCCTCCGGCGCGACACTCTCCTCTTTCTCGTCGCCCACCTACCGCAGTG
CTGGGCAGCCGCGAAGGGCCACGTCGCCCGCCTTCCCCGACACTTACTCC
TCGAGGTCCTCTCCCACGATGGCTTGGACCACGGGGAAATCGTGGCGTTC
CGGGCGGCCGTGTACTGGCTGGAAGAGTGGCGACGCACCCGTCCGGTGGA
GCAGGACGAGGCCGAGAAGGAGGAAGAGGAGGCGCTGGTGGAGGAGGTGT
TGGGTCAGGTGCGCTTCCCCTACATGCCCGCCGCCCTGCTCGCGGAGGAG
GTGGAGTGCCACCCAATCATGCAGGCAGAGGCGTGTCAACGCTTTATCCT
GGAGGCCTACAGGTATCAGGCGATCTCGCAACGCGGACAGCTGGCGCGTC
CGGTGCAGTTGGGGGCGGGGGACGGGGGGCGCCCCCGGTTTGAAGGGCAG
CGGTCGCAAGGACTCGTTCATAAATACGCAGAGGGTATGGGCGTCCGCGC
TCGCCCCCGCCGCAAATTGATCCATGATAAACGGGATGATGAGTGTGACC
TCTTGGTGTCGGAGAAGGGCCTGGCGAGCAGACGGGTGTACGGCGGTGGG
CATCACTTAGAAATGGAGGAGAAGTGGGGGGAAGAGCTGCTTTTGCCAGG
TGGCGCAGGTACATTAGTTAACAGACACGCGACATCCACTGCCGCAGATC
ACCCAGTGGTCTGCCGTTTGGAGGATCTCGCACTGCGGGCGGCTCGCTCC
GAGGAAGGGTCAGAGAGGGAGCGAGTCGTTCTTCCAGACTCCCTAGCTTG
TGCGGACACAACCAACGCACCAAGGATTAAACACGGTCTGGAGGAGATGA
GCAACAGGCGGGTTGAAAGGCTCAGTGGCAGCAGCAAGAATTTGAGCAGT
ACAGTGATCTGATGGGGAGGCGGTTGGTGGCAAGAGGCGATATTATCCGA
CAGGTCCTGGTCGATAGGTACCTCTGCATATACACTTGTAAAAAATCGAA
CATCCTTATTGCACGTGAA back to topprotein sequence of rna1352 >rna1352-protein ID=rna1352-protein|Name=rna1352|organism=Nannochloropsis gaditana|type=polypeptide|length=263bp
MRRTSRRQMACVHCTTEVHVEVPDVQVPLAVSSPASILFLCVGVIALLLP
SAMGYDAAPSCSAFLTPHSPSSFQLFASSLWKCSRCSSIPFSCSRFIVSR
QLVMKGAADPHHTVKRICATNKYAKSSYEIGKKFEAGISLVGTEIGPVAS
GQCQLRDAYCRVRDGELWIHNLFIGPHKTTGKYFQHAEKRPRRLLVHKKE
ILELKYASDRDGQTIVPLCIYLTATHRVKVEVAIGRGIKKYDKREAVKQR
EIKRGFERLLKTY back to topmRNA from alignment at CM002457.1:420468..421638- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1352 ID=rna1352|Name=rna1352|organism=Nannochloropsis gaditana|type=mRNA|length=1171bp|location=Sequence derived from alignment at CM002457.1:420468..421638- (Nannochloropsis gaditana)
GGTCCACATCCGTGGTGCCCTCCCTCGTGCGGACGAAGATGTGTCGGGAA
AGATTACCCGGAGCATGCCATGGCCCCTGGTTGAGCTGGACATCAGACCT
ACGACGTCAAAGATTTATCAGCTTTCTAGTGATTGAGTCTCACTCATAGC
CCATTACTGAGCAGGTATATATAAAGTTTCAGGATTGACAAATTTCCTGT
GACTTATCTGCCCTCTTTGGACCTCAGGCGTGGACCTAGCAAAAGCAACC
GCACGTCTACGCGGTCATGCGGCGGACTTCGAGAAGACAAATGGCTTGCG
TGCATTGTACAACAGAAGTACATGTGGAGGTTCCCGACGTACAAGTACCT
CTTGCCGTTTCCTCGCCCGCATCGATTCTATTTCTCTGTGTGGGCGTCAT
TGCACTCTTGCTTCCGAGTGCGATGGGCTACGATGCCGCACCATCATGCT
CCGCATTCTTGACGCCGCATTCACCGTCCTCCTTCCAATTATTTGCGTCA
TCTCTTTGGAAGTGCTCTCGGTGCTCTTCTATTCCTTTCTCCTGTTCCCG
CTTCATAGTCTCCCGACAACTCGTTATGAAAGGCGCCGCAGACCCCCACC
ACACTGTCAAGCGCATTTGTGCCACAAACAAATACGCGAAATCATCTTAC
GAGATCGGAAAGAAATTTGAAGCGGGTATCTCACTAGTTGGTACGGAAAT
CGGTCCGGTGGCTAGCGGGCAGTGTCAGCTAAGAGATGCCTACTGCCGGG
TACGAGACGGGGAGCTCTGGATTCACAATCTCTTCATAGGGCCGCATAAA
ACGACTGGAAAGTATTTTCAGCACGCCGAAAAACGACCACGACGCTTACT
AGTGCACAAAAAGGAGATACTGGAATTGAAATATGCCTCGGACAGGGACG
GACAAACCATCGTTCCCTTATGCATTTATCTGACGGCCACCCACCGTGTG
AAAGTAGAGGTGGCGATCGGAAGGGGAATCAAAAAGTACGACAAGCGAGA
AGCAGTCAAGCAGCGCGAGATAAAGCGGGGGTTCGAGCGGCTACTTAAAA
CCTACTGATTGGTTTTGGGTGTGAGCTAGACAGGCGTATGTCGGGTAACA
TAGTGCGTTCCCATGTGCAGGAAGTGTCCCCAAACGTCTTAAAATAATGT
AAAAACTGGACAAACTTTATT back to topCoding sequence (CDS) from alignment at CM002457.1:420468..421638- >rna1352 ID=rna1352|Name=rna1352|organism=Nannochloropsis gaditana|type=CDS|length=792bp|location=Sequence derived from alignment at CM002457.1:420468..421638- (Nannochloropsis gaditana)
ATGCGGCGGACTTCGAGAAGACAAATGGCTTGCGTGCATTGTACAACAGA
AGTACATGTGGAGGTTCCCGACGTACAAGTACCTCTTGCCGTTTCCTCGC
CCGCATCGATTCTATTTCTCTGTGTGGGCGTCATTGCACTCTTGCTTCCG
AGTGCGATGGGCTACGATGCCGCACCATCATGCTCCGCATTCTTGACGCC
GCATTCACCGTCCTCCTTCCAATTATTTGCGTCATCTCTTTGGAAGTGCT
CTCGGTGCTCTTCTATTCCTTTCTCCTGTTCCCGCTTCATAGTCTCCCGA
CAACTCGTTATGAAAGGCGCCGCAGACCCCCACCACACTGTCAAGCGCAT
TTGTGCCACAAACAAATACGCGAAATCATCTTACGAGATCGGAAAGAAAT
TTGAAGCGGGTATCTCACTAGTTGGTACGGAAATCGGTCCGGTGGCTAGC
GGGCAGTGTCAGCTAAGAGATGCCTACTGCCGGGTACGAGACGGGGAGCT
CTGGATTCACAATCTCTTCATAGGGCCGCATAAAACGACTGGAAAGTATT
TTCAGCACGCCGAAAAACGACCACGACGCTTACTAGTGCACAAAAAGGAG
ATACTGGAATTGAAATATGCCTCGGACAGGGACGGACAAACCATCGTTCC
CTTATGCATTTATCTGACGGCCACCCACCGTGTGAAAGTAGAGGTGGCGA
TCGGAAGGGGAATCAAAAAGTACGACAAGCGAGAAGCAGTCAAGCAGCGC
GAGATAAAGCGGGGGTTCGAGCGGCTACTTAAAACCTACTGA back to top
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