|
|
Properties
| Property Name | Value |
|---|
| Product | adhesion regulating molecule 1 |
| Orig transcript id | gnl|cribi|Naga_100136g5.3179.mrna |
| Orig protein id | gnl|cribi|Naga_100136g5.3179 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:411021..412501 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1348 ID=rna1348|Name=rna1348|organism=Nannochloropsis gaditana|type=mRNA|length=3418bp
ATCACAGAGAAAAGGATTCGGTGACTGGGTACTGCTGTGCCCCTTCCAGG
TTTCTACAGCTTTGGGATAGAGCCTTTAATTTTGCCCCTCCTCGCCAACC
ACTGGGTGCCCCGGACCAAGATATCACCCAATATCGGCCCTCGTTCAAAG
CCCATCGTCGTGATCATTGCCACAATACATGTCAGCCCGCAAAATCAACC
CGTTCAAGGACACCAACGTTCTCCATAGGCTTCGAGCCAAAGCTCGCACG
GGATTCAAATCCCCGGGATGGGTCATGGCAGCCGTCACGGCCATACCGCC
CTGCACTCCTCCTCCCCAGCCTCGTACGGTCCCCAATCTAGTCCTTCCCA
CCGACCGTCTCCTGGTTGGGTACGAGCGAAAGTTCCCGGAGGCGATGCAG
GACGTGGTGCGGTCCGTGGACGGCCGGTTGGTCAATCGCAGTATGGTGTT
TGTCCAGAAGCAGTACGCCTTCATCCAAGAAGGTCACTCGGAGGCCGAGG
CTTTCAAGCTCACGGAGGCAGCCCTTGCAGAGGAGGAAGGCAAAGCTCTG
AAACAGCTTGAGGAGGTGACCGCCCAGGCCCGCGCCACGGGCGCCATACC
CGCCTTAAGCGCAATGGAGCGACAAAAAGATGGGCGTTGGGACCGCTTGC
AGTTTTGGCGGAAGGAGTTGAGCTCTTCCCCGTACGAAACGTGGTCGCAC
GGGAAGCAAGCCTCCTTGGACCGGTGGCTGACTAAGGATATGTTGGAGTG
GGAGCCGCACCAGACCCGGTATTTGGGGCAGCAACGCTTCCAGGACTCCT
TGAAGGCTGCGCGTGAGACCATTTTCGCAGACATCGTGAAGCCTCTCCGG
GAAAAATTGAGGACGGCGGAATCGGCGGCAGGGACGGCTCTGACGCCGGA
AGACTTATACAGCTTTCAGCTGGAGCAGGCTGTGGGCGAATATCAGGAGT
GGGAGGAGAAGATGCTGGCGAGGCAGGCGGGGACCTGGGGCAGTGAGGAG
ATCGCGGCCTTGCAGGAGTGGCTGGAGCGGAACCACGCCTTGGTCATGCC
AGGCTTCCAGGACCCGCGACCACAGGTGGCAGGCGGGTTCGCGGACCAGG
CGCGGAGACACGCGCGGGGCCAGGTTTTGCAATACATTGCCTTCCCCTTG
CTCCGGCCCGAGTTCCAGAGCATTCCTTACCTGAGCCGTTACCTGGCCCG
GGCTTTTGCGGAGGTGGCCAAGCAGGAGGCGGGTCGGGGGCTTCGGCCCA
TATTGATCTCGGGGCCCCTGGGGAGGCGGGAGGCAGATTTCGCGGCGGGC
GAGGCGATGCTGAACGATGCTCTGCCCAAGCTGGTGGTGAAGACGTTCGT
GACGGTGGCGGTGGAAAGGCCCTTTGCCTGGGAACTGATGCGGTGTCTGT
TGACGGAGAGGATTCGGACGGCGGCGTCGGCGGCGGACTTGGAGACCCTC
CCCGAGCTGCGGGGCTTGGGCGGGAGGGAGGCGATGGCCCAACACGTGGA
GGGGCTGATCCAGCACCTGACGGAAGTCTTGATGACCCTGGCGGCGGACG
AGGACACCTCCGGGCTCGGGCAGGACATCGACGTGGCCTACGGTGCTGTG
AACGAGTTGCACCGGGTGGCGCAGGAATTGTTGCATGCGGGCGAGGCCGG
GGCGGAGGGCGGGGCGGAGGGCGGGGCGGAGGCCGGGCACGCCTACGACG
CGGCCATCGACGCCTACAAGCAGGAGCACCACGGGTGGGTGGCGGAAGAC
TTGGCGATCGGAGAGGCGCTCAGGAAGTTCGACCCCAAGGTGGAGGCTAT
GTTTGGGGTGGGCGTTCCCGAGGCCCACAAGGCCCAGGAGGCGGCTGTGG
AGAGGAAACAGTCTCAGGTGTTGGAGGAGGCGGGGAGGGACTTCGCTTTC
AGGAAGCGAGAAGCGGGGAGATGGGCCTGGGAGAGGTCTGTGGGCCTGGG
GGAGGTGGACGAGTACGACAAGCGCTGGCTGAGGCGGCCTCAGAAGGGAC
GGGTGGCTGCGGAGCGAGGCGAGGAAGCGGTTGCCAATCCTAACACTTTC
TCCCAAACGCCGCATTCCCGAAGTCTACCCTACAGGATGCTCACAATGAG
GCGCGGACTCCAACTATTGGGTCGTAAGGCCAGCCGAAGCAGTGGAGGAG
GACTAGGGGGTAAAGTGAATGCCACCCCCCCCACAGCTGCCTTCTCGTCC
GACAGCTCCATTACGGTTGACCTCTCCAAGGCCTTCGACACGCACAATTT
GGACTCGGCGCCTCCGACCTCGGCGACGGCTACCAAGGAGGAGCTCGTCG
AGTATCTCCGGCTCATGTACACGATGCGGCGCATGGAAATCACCTGCGAT
ACGGAGTACAAGACGCGAACCATCCGAGGGTTTTGTCATTTGTACGATGG
GCAAGAGGCAGTGGCCGTGGGTGTGAATTCGGCTTTGGACTTGAATGATT
CTTGGATAACCTCGTACCGCTGCCATTGTGTGGCACTCTCCCGGGGCTCC
ACGGTGGAACAAATCATCTCGGAGCTCTTTGGTTTCAAAGAAGGGACCGT
GAAAGGGAAGGGCGGGTCCATGCATTTCTACAGCAAAAGCCACAATTTTT
ACGGCGGACAAGGTATCGTCGGGGCCCAGGTGCCTGTGGGCACGGGCCTG
GCCTTTGCCAATAGGTACAAGACCCCGCCCGGGGAGAACATGCCAGTGGC
GATCGCCATGTACGGAGACGGGGCTGCCAACCAGGGACAAATTTGGGAGG
CGGCAAATATGGCGGCCCTCTGGAAGCTGCCCATGATTTTCTGCATCGAA
AACAATCAGTACGGCATGGGAACTTCGATCGAGCGGTCCTCCTCCAACAC
GAAGTACTTCACGATGGGCAACCGCATCCCCGGGATCCGGATGGACGGGA
TGAACGTGGTGGCCGTGCGGGAGGGCATGAAGTTCGTCAAGGAATTCGTG
GGCTCGGGCAACGGTCCCCTGTTCGTGGAGATGAACACGTATCGCTACCA
CGGACACTCCATGTCCGATCCTGGGACCACCTACCGGAACCGGGACGAGA
TCGTGCAGACCCGATCGACCCGGGATCCGATCGAGTGGGTGAAGAAGAAC
CTGATCGAGCACAGCCTCCTCTCGCCCGACGACGTGAAGGAGATGGAGAA
GCAGATCCGAAAGGAAGTGCAGGATGCCCTGAAGAAGGCCAAAGCGGGGT
CGCAGCCGCCCTTAGAGGAGCTGTTCAAGGACATATATTGCGACGATAAG
GGAGGTAACCAGTACCCGCCTTACATCCGCATGCCCGATCGAACCAAAAG
CCGGACATTTGCCATGGGGAGACCACGGAGAACGGGCACAGCAAGAGGTA
CACGAGGGGAAATCAGAGGAGAGTTGAACAATGGAGAAAAGGATGAAAGA
CTGTTTCGGTTACATTGA back to topprotein sequence of rna1348 >rna1348-protein ID=rna1348-protein|Name=rna1348|organism=Nannochloropsis gaditana|type=polypeptide|length=356bp
MERFFGSFVPTTREYVSFKAGRCDVEDKGNNKFLITPDRRKGQLTLLKHV
DELTHLQWKDRTTNTVVEDVIVMPHDAHFTRVNTGRTKDRVYMLQYQGGS
SRRFFFWMQSASDEKDEEVVTRLNTCMAEPPAEDTSMGGDDSTEGGASGA
GGGASDASPSQQNVEDLLSSMLGPGATSGQFRAPAPSIAPTAPASGSSSA
GAVGRGGQLTAADLQRAMMNLTGRQPQPPQSVPLTEVLSADQVLRSGILA
DPAVQEQLIPLLPEGQQTPEQLEAIVRSPQLRSSLASLTGALQTDNFNAI
VSNFGLDPSRGMEALAAGNNVEAFLQALLALRQEGEGSDSRGGGEGKEEG
REYKEE back to topmRNA from alignment at CM002457.1:411021..412501- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1348 ID=rna1348|Name=rna1348|organism=Nannochloropsis gaditana|type=mRNA|length=1481bp|location=Sequence derived from alignment at CM002457.1:411021..412501- (Nannochloropsis gaditana)
AGGATCGAACGACGATGTGTTCCTGTAGGCAAACAGCCAGGATCCTGTTA
TCCCGTGCAACAAAAAAGGCTTCTGATAAATCCAATACATGTCCTCCACA
GCAGCGTTGGTATCAGGGAGACTAGCATGGAACGGTTCTTCGGCAGTTTT
GTGCCCACAACACGCGAGGTAGGTGTGGGGTATTTTTCATGGTTTTTCTG
GTTGAGCTTTTAATACTAACTCTCGTCTTGTCTTGGCACGAATGTGCGTT
TTCCGTCACTTCTAGTACGTCTCCTTTAAAGCAGGACGGTGCGACGTGGA
AGATAAGGGGAATAACAAATTCTTGATTACGCCTGATCGACGCAAGGGAC
AACTTACTCTCTTGAAGCATGTAGACGAGCTCACCCACCTGCAATGGAAA
GACCGAACGACCAATACGGTCGTGGAGGACGTGATTGTCATGCCGCATGA
CGCACACTTCACACGAGTAAACACCGGCCGCACCAAAGATCGCGTGTACA
TGTTACAATATCAAGGAGGGTCCTCGCGACGCTTCTTTTTTTGGATGCAA
AGTGCCTCCGACGAAAAGGACGAAGAAGTCGTAACGCGTTTGAACACGTG
CATGGCTGAACCACCAGCCGAAGACACCTCAATGGGTGGAGATGATAGCA
CAGAAGGAGGCGCAAGTGGGGCAGGTGGCGGCGCCTCGGACGCCTCACCC
TCTCAGCAAAACGTGGAAGACTTGCTGTCATCCATGCTCGGCCCTGGGGC
CACGTCAGGTCAGTTTCGTGCCCCCGCGCCCTCAATCGCCCCCACTGCCC
CCGCCTCGGGAAGCAGCAGCGCCGGTGCCGTCGGTCGAGGGGGCCAGTTG
ACAGCGGCAGACTTGCAGCGGGCCATGATGAACCTGACAGGCCGACAGCC
ACAGCCCCCGCAGTCGGTGCCCTTAACGGAGGTGCTCAGCGCCGACCAAG
TCCTCCGCTCTGGCATCCTAGCCGACCCCGCCGTCCAAGAGCAACTAATC
CCGCTCCTACCGGAGGGGCAGCAGACCCCGGAGCAGCTGGAGGCGATCGT
GCGCAGTCCCCAATTGCGCTCGAGCCTGGCGTCCTTGACCGGTGCCCTCC
AGACGGATAACTTTAATGCCATCGTGTCCAATTTTGGCCTTGACCCTTCC
CGGGGCATGGAAGCCCTGGCCGCGGGGAATAATGTAGAAGCCTTTCTACA
GGCGCTCTTGGCCTTGCGGCAGGAAGGGGAGGGCTCGGATTCAAGGGGGG
GGGGAGAGGGGAAGGAGGAGGGGCGGGAATACAAAGAGGAATAGTAAACG
AAGATTGCATAGAAGGAAAGGGACATGGCGAAGAGGGCTTGTTCAGAAAA
ACGTTATGAAGGTCCAAATGTAGAGTGTTGGAATCATGCGCAAAGTACCG
ACAGCTTTCTCCCACGCATCTTCCAGGTAGTTTTTCCTGAACCAGTCAAT
GTAACCGAAACAGTCTTTCATCCTTTTCTCC back to topCoding sequence (CDS) from alignment at CM002457.1:411021..412501- >rna1348 ID=rna1348|Name=rna1348|organism=Nannochloropsis gaditana|type=CDS|length=2142bp|location=Sequence derived from alignment at CM002457.1:411021..412501- (Nannochloropsis gaditana)
TACGTCTCCTTTAAAGCAGGACGGTGCGACGTGGAAGATAAGGGGAATAA
CAAATTCTTGATTACGCCTGATCGACGCAAGGGACAACTTACTCTCTTGA
AGCATGTAGACGAGCTCACCCACCTGCAATGGAAAGACCGAACGACCAAT
ACGGTCGTGGAGGACGTGATTGTCATGCCGCATGACGCACACTTCACACG
AGTAAACACCGGCCGCACCAAAGATCGCGTGTACATGTTACAATATCAAG
GAGGGTCCTCGCGACGCTTCTTTTTTTGGATGCAAAGTGCCTCCGACGAA
AAGGACGAAGAAGTCGTAACGCGTTTGAACACGTGCATGGCTGAACCACC
AGCCGAAGACACCTCAATGGGTGGAGATGATAGCACAGAAGGAGGCGCAA
GTGGGGCAGGTGGCGGCGCCTCGGACGCCTCACCCTCTCAGCAAAACGTG
GAAGACTTGCTGTCATCCATGCTCGGCCCTGGGGCCACGTCAGGTCAGTT
TCGTGCCCCCGCGCCCTCAATCGCCCCCACTGCCCCCGCCTCGGGAAGCA
GCAGCGCCGGTGCCGTCGGTCGAGGGGGCCAGTTGACAGCGGCAGACTTG
CAGCGGGCCATGATGAACCTGACAGGCCGACAGCCACAGCCCCCGCAGTC
GGTGCCCTTAACGGAGGTGCTCAGCGCCGACCAAGTCCTCCGCTCTGGCA
TCCTAGCCGACCCCGCCGTCCAAGAGCAACTAATCCCGCTCCTACCGGAG
GGGCAGCAGACCCCGGAGCAGCTGGAGGCGATCGTGCGCAGTCCCCAATT
GCGCTCGAGCCTGGCGTCCTTGACCGGTGCCCTCCAGACGGATAACTTTA
ATGCCATCGTGTCCAATTTTGGCCTTGACCCTTCCCGGGGCATGGAAGCC
CTGGCCGCGGGGAATAATGTAGAAGCCTTTCTACAGGCGCTCTTGGCCTT
GCGGCAGGAAGGGGAGGGCTCGGATTCAAGGGGGGGGGGAGAGGGGAAGG
AGGAGGGGCGGGAATACAAAGAGGAATAGATGGAACGGTTCTTCGGCAGT
TTTGTGCCCACAACACGCGAGTACGTCTCCTTTAAAGCAGGACGGTGCGA
CGTGGAAGATAAGGGGAATAACAAATTCTTGATTACGCCTGATCGACGCA
AGGGACAACTTACTCTCTTGAAGCATGTAGACGAGCTCACCCACCTGCAA
TGGAAAGACCGAACGACCAATACGGTCGTGGAGGACGTGATTGTCATGCC
GCATGACGCACACTTCACACGAGTAAACACCGGCCGCACCAAAGATCGCG
TGTACATGTTACAATATCAAGGAGGGTCCTCGCGACGCTTCTTTTTTTGG
ATGCAAAGTGCCTCCGACGAAAAGGACGAAGAAGTCGTAACGCGTTTGAA
CACGTGCATGGCTGAACCACCAGCCGAAGACACCTCAATGGGTGGAGATG
ATAGCACAGAAGGAGGCGCAAGTGGGGCAGGTGGCGGCGCCTCGGACGCC
TCACCCTCTCAGCAAAACGTGGAAGACTTGCTGTCATCCATGCTCGGCCC
TGGGGCCACGTCAGGTCAGTTTCGTGCCCCCGCGCCCTCAATCGCCCCCA
CTGCCCCCGCCTCGGGAAGCAGCAGCGCCGGTGCCGTCGGTCGAGGGGGC
CAGTTGACAGCGGCAGACTTGCAGCGGGCCATGATGAACCTGACAGGCCG
ACAGCCACAGCCCCCGCAGTCGGTGCCCTTAACGGAGGTGCTCAGCGCCG
ACCAAGTCCTCCGCTCTGGCATCCTAGCCGACCCCGCCGTCCAAGAGCAA
CTAATCCCGCTCCTACCGGAGGGGCAGCAGACCCCGGAGCAGCTGGAGGC
GATCGTGCGCAGTCCCCAATTGCGCTCGAGCCTGGCGTCCTTGACCGGTG
CCCTCCAGACGGATAACTTTAATGCCATCGTGTCCAATTTTGGCCTTGAC
CCTTCCCGGGGCATGGAAGCCCTGGCCGCGGGGAATAATGTAGAAGCCTT
TCTACAGGCGCTCTTGGCCTTGCGGCAGGAAGGGGAGGGCTCGGATTCAA
GGGGGGGGGGAGAGGGGAAGGAGGAGGGGCGGGAATACAAAGAGGAATAG
ATGGAACGGTTCTTCGGCAGTTTTGTGCCCACAACACGCGAG back to top
|