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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100205g13.2988.mrna |
| Orig protein id | gnl|cribi|Naga_100205g13.2988 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:375354..376286 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1333 ID=rna1333|Name=rna1333|organism=Nannochloropsis gaditana|type=mRNA|length=2257bp
TTCAATTCACTACCCTTCTTCTCTGATGCATAGAGGTAGCATACAGAAGC
ACGCTGGCGGGGCCGGAGGCGTGTTGCTTGTGCATGAAAAGGAAGCAACG
CTTGACTGCGGGGACGGGTTCTTCATAAATTGTTCGATGGACCCCCCAAA
CGAGCGCTTCTCTTTGTTGAAAACATCGCACAACTGATGCTACCCTCCAC
ACATCGAGTAAAGGTATTTGATGCCGGCTGTTGACGCCCTGCAGGACTTC
AGCCTTGGCCAACGCGTTGCGGACGAGGAAGGTAACCGTGGGACTGTCAG
GTACCTGGGCCCCGTGGCGTCCGCCAAAGACCCCGAGGCCGCTTGGGTTG
GAGTGGAATGGGATGACCCAGGTCGCGGCAAGCACGATGGCAGTGTGGTG
ACTACCGCAGGGAAGATTCACCGTCATTTTTCGTGTCTCAAGCCGGGACC
TACGTGTGCATCGTTCCTGAAGCCCAACAAGTTGGACCGGGGGGTGAGCT
TAATGGCCGTATTGCACAAACGCTACGTGGTTCCAGACGCGCCCCTGGAG
GCTCCCAATCAAGTTTTCGAAAACGCTTACGCAAACACATCTCGTGGCGG
GCAAAAAAAGATCGAGTTTCACGGGGAGACACAAATCCGGGCACGGCAGC
AGATCGGCCGTCTAGAGAAAGTCTCCCTGCGGGGGGAACGTGTGGCCTGG
GCCGGCGAGGAGGAAGTGAAAGAGGAAGCCTCGCATCTGGTGGAGGTGGA
TTTACAGGGCAACCTCTGGTCCGACTGGGAGGAGCTGGGCAGGATGGCGC
GTCAAATGCCTCGCTTGGAGAACCTGCACCTGAACAGCAACCTGATGCGG
CCACTAGAGACGCCGGCCACGCCCGAGCTCAGAGGATCTTTCCAGGCCTT
GCGAGTCCTTATTTTGAACAGTTGCGGTCTGAGCAGCTGGGCGACAGTGC
TGCACGTGGAGGAATGCGTGCCTGGATTGGTGGAACTGGGGCTGGCGCGC
AACGCGTTGGGGGGGCAAGACCTGGGGACTGCCTGGGCCCGGCGACGAGC
ACGGTCGGAAATTCATGCGCCTTTCTATCGGCTGCAACGTCTGGACTTGT
CGGGGACGGGCCTGCGGGATTGGGAAGACGAGGTGGCGTTCCTCAAGACG
CTGCCATCCCTGCGTGCATTGAATCTTAACGAAAACTTGCTCGTCGAGAT
TCCCGCGGGCACGGTCCAGACACACGGGGCCACGCACAGCGCCCTTGGCT
TTCAGGCCCTGGAGGCCTTGGACTTGAGCTGCAACCTGGTGGAGTCCTGG
TCCTGCCTGGATGCCCTCAACCTCCTCCCTCGTCTCCACAGCCTCCGCTT
TGCCGGGAACCCCCTCACCCGCGGGATGGGCCAGGGCGAGGCCCGCCAGC
TGTTGATCGCCAGAATGGGGGCACTGCGCAGGTTAAACGGCTCGGAGGTC
TCGACGAAAGAGAGGGCGGACGCGGAGAAGAGTTACCTACGGCGGGTGGC
GCGAGAGTGGGGCCGACGCAGGGGAAGCGGGGACGGGCAAGGGGAGGGAG
CGAACGAAGTGATGCTATCGGAGGAAGAATGTATCCATCAATTGAAGCTG
GAGCACCCCCGGTGGTGGCCGCTGATGGAGCAGCATGGAGAGAGTGTAGG
GGGAGGTAACGGCGTCGAGCGCGGGGATGGGGCCTCGGGATTGGGTTCTC
TGGCGAGGGAGATGGTCCTGGTCCGGTTGGTGAGCATGGCGCCCGGCTCC
ATCACCCAGGGGCCGGTGGAGAGAAAGCTACCCGGAAGTCTCACGGTCGG
CCAGCTCAAGCTCTTGTGCCAGAGGCTTTTCAAGCTGGAGGCGGCGATGC
AGACGTTGTCGTTGAAAGCGGACCCACAGGCCCCGCCGAGCTTGTTGGGC
ACGGACGAGGAGGCCCTGGCCTACTGCGGGGCGACCAGCGGGTGCGAGAT
CTTTATGAACGAGCGGGACTTGAAGCAGGAGGCGAGGGAGAAAGAGTCGA
GGGAGACGGCGGCGCGGGAGAGAATGCTGGCGCAGGCGGAGGAAGCGGAA
CGCGTGGAGAGGATGAGGCGAAGAGAGGTGGCTCGGGAGAAGCAAAGCGT
GGTGGCGGCTGTGGACGCCGGTGGCATTGGGGTAAGAGGGGGAGGGGATG
AAGAGCGGTTGTAGATAGAGCGTACTAAGCCACAGAGCTGCACACGAAGC
GAACGAAGAGGCAGAAATCAAAAAAAGAGGCCGAAGAGGCAGAAATCAAA
AAAGAGC back to topprotein sequence of rna1333 >rna1333-protein ID=rna1333-protein|Name=rna1333|organism=Nannochloropsis gaditana|type=polypeptide|length=310bp
MFYCSPTGNSVMADSLVFNTSAFSAVSKWLEHGTASREDTTHPEDATGPQ
DMERDHTREHSTSRRLKRAGVGLAFKKDKDRQGNAAGGSMSTLQKLLRGN
SRPGKRPREKEDDEATAKNEPREDSAEDDGEVVDSKAHVFASKQSSLPRA
SIDAVACTQTGDSKKKKRRKKKEGDKGERDTNANEEKTGQDVADAKSPHN
VLSASSKKGKPCEESRAPTAQAAPPDPANDGAHRPSTTETRGIENRHGSN
QAPRRRTKTRSKQKNIRRDTRCLEDRPAHLQEGHTAFAGRTLTEETKRRL
ATNPMAPLKN back to topmRNA from alignment at CM002457.1:375354..376286- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1333 ID=rna1333|Name=rna1333|organism=Nannochloropsis gaditana|type=mRNA|length=933bp|location=Sequence derived from alignment at CM002457.1:375354..376286- (Nannochloropsis gaditana)
ATGTTTTACTGCTCACCCACAGGTAACAGCGTCATGGCGGACTCCCTCGT
CTTCAACACCTCGGCCTTCAGCGCTGTCTCGAAATGGTTAGAGCACGGGA
CAGCTTCTAGAGAAGATACTACCCATCCAGAGGATGCCACGGGGCCACAG
GACATGGAAAGAGATCACACACGAGAACACTCTACTTCCAGGCGCCTCAA
ACGGGCAGGAGTAGGCTTGGCTTTTAAAAAAGACAAGGACAGACAGGGAA
ATGCGGCTGGAGGCTCTATGAGCACTCTACAGAAGCTCCTTCGGGGGAAC
AGTAGACCTGGCAAGAGGCCGAGAGAGAAGGAAGATGACGAGGCGACCGC
AAAAAATGAACCAAGAGAGGATAGCGCCGAGGATGATGGCGAAGTGGTCG
ATTCAAAAGCTCACGTATTCGCCTCTAAGCAGTCCTCCCTGCCACGTGCT
TCCATCGACGCCGTCGCCTGCACGCAAACTGGAGACAGCAAGAAAAAGAA
ACGAAGGAAAAAAAAGGAAGGAGATAAAGGGGAAAGAGACACGAATGCAA
ATGAGGAGAAGACGGGCCAAGATGTTGCGGACGCTAAGTCACCACACAAT
GTGCTCTCGGCGTCAAGCAAGAAAGGGAAGCCCTGTGAGGAATCACGGGC
ACCAACCGCCCAGGCCGCCCCTCCTGACCCCGCCAACGACGGCGCCCACA
GGCCGAGTACAACAGAGACACGGGGGATTGAAAATAGACACGGCAGCAAC
CAGGCACCCCGCCGGCGGACAAAGACGCGTTCCAAGCAGAAAAACATTCG
CCGGGACACGCGCTGTTTGGAGGACCGCCCCGCGCACTTGCAAGAGGGCC
ACACGGCTTTTGCCGGTCGGACACTGACGGAGGAAACAAAACGCCGCCTC
GCTACCAACCCCATGGCTCCTCTCAAAAACTGA back to topCoding sequence (CDS) from alignment at CM002457.1:375354..376286- >rna1333 ID=rna1333|Name=rna1333|organism=Nannochloropsis gaditana|type=CDS|length=933bp|location=Sequence derived from alignment at CM002457.1:375354..376286- (Nannochloropsis gaditana)
ATGTTTTACTGCTCACCCACAGGTAACAGCGTCATGGCGGACTCCCTCGT
CTTCAACACCTCGGCCTTCAGCGCTGTCTCGAAATGGTTAGAGCACGGGA
CAGCTTCTAGAGAAGATACTACCCATCCAGAGGATGCCACGGGGCCACAG
GACATGGAAAGAGATCACACACGAGAACACTCTACTTCCAGGCGCCTCAA
ACGGGCAGGAGTAGGCTTGGCTTTTAAAAAAGACAAGGACAGACAGGGAA
ATGCGGCTGGAGGCTCTATGAGCACTCTACAGAAGCTCCTTCGGGGGAAC
AGTAGACCTGGCAAGAGGCCGAGAGAGAAGGAAGATGACGAGGCGACCGC
AAAAAATGAACCAAGAGAGGATAGCGCCGAGGATGATGGCGAAGTGGTCG
ATTCAAAAGCTCACGTATTCGCCTCTAAGCAGTCCTCCCTGCCACGTGCT
TCCATCGACGCCGTCGCCTGCACGCAAACTGGAGACAGCAAGAAAAAGAA
ACGAAGGAAAAAAAAGGAAGGAGATAAAGGGGAAAGAGACACGAATGCAA
ATGAGGAGAAGACGGGCCAAGATGTTGCGGACGCTAAGTCACCACACAAT
GTGCTCTCGGCGTCAAGCAAGAAAGGGAAGCCCTGTGAGGAATCACGGGC
ACCAACCGCCCAGGCCGCCCCTCCTGACCCCGCCAACGACGGCGCCCACA
GGCCGAGTACAACAGAGACACGGGGGATTGAAAATAGACACGGCAGCAAC
CAGGCACCCCGCCGGCGGACAAAGACGCGTTCCAAGCAGAAAAACATTCG
CCGGGACACGCGCTGTTTGGAGGACCGCCCCGCGCACTTGCAAGAGGGCC
ACACGGCTTTTGCCGGTCGGACACTGACGGAGGAAACAAAACGCCGCCTC
GCTACCAACCCCATGGCTCCTCTCAAAAACTGA back to top
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