rna133, rna133 (mRNA) Nannochloropsis gaditana

Overview
Namerna133
Unique Namerna133
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1470
Alignment locationCM002455.1:351498..352048 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100013g91.9823.mrna
Orig protein idgnl|cribi|Naga_100013g91.9823
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:351498..352048 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100013g91gene127Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna133rna133-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30535.1cds133Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna133 ID=rna133|Name=rna133|organism=Nannochloropsis gaditana|type=mRNA|length=1470bp
ATGGCGCTCAAGGTGGATGAGTTGAGCCCATCCCAGCTCATAACGATGTT
CATCATCATGAGTATAATCACATACTTTATTGTCATCCACGTCGTTTTCT
TCCTGATGGACGTGATAAAGCTCAGCAAAATACCAGGACCAGTCCCTGTG
CCAGTTCTGGGCAACCTGTACGACCGTATGGCCCTTACCTCGTTCATCGG
CTGGCTAAGCAAGCTGAGACGCAAGTATGGAAAGATTTACCGGGTCTTCA
CAGGCTCACGGGCCTACGTGGTGTTGATGGATAAGGTTGCCGCACGCGAG
GCCCTGAGTGACCCCCGCACGTTCGTGAAGGGCCCAGATTACAAGGATAA
ATTTTCCTTCGTCTTCGGGGACGGCCTTGTGACCAGCGTGGGCGACAAGC
ACAAGGCCGACCGCGCTTTGTTCGCCAAGTATTTCACGCAGAAGAAGATT
GAGACACATCTGCCCGTTTTGTGCGAGCAAACCCTGCAGGCGATCAACAC
GGAAATGGAACCGCACGTGGGCCAGGTGGTCGACCTGGAACACTTCTTCT
CCATCCTGGCCTTTAAGATGTTTTGCCGGTTCGCGATCAACCACGAGTTT
GCCGATTCGGAAGTGTGGAGCGAACTCACGTCCCGGGGCTCCAACATCAT
CGGCGAGAGCATCGTCTTGGGCATCCCAGTCACGACCTGGATCCCGCGGG
TGAAGAAGCTCCTGGAGGACGCGGAGAGGTTCCATCGCGTCTGCGATCCC
TTGATCGACGCGCGCATCCTGGCCTTGCAAAAGGGAGAAGAGATGGTGGA
CGATCCATTGACAGTCATGGTCCAGGAAAAGATGACCCGCAAACAAATGT
ACAGCCACCTAGTCACCATGTTAGCCGCTGGTCACGACACGACTGCCTTC
TGCACCTGCTACACGCTTTTCCTCCTCGCCAAAAATCCCAAGATTCAAGC
CAAACTCAAGGCGGAGGTCAAACGCGTCCTTGGGAACCGGACCAACATCA
CGCCCGAGGACATATCCCAGCTGACGTACGCGAAGAATTGTTTCCAGGAG
TCCCTCCGCATCTACTCCGTGGTGCCGCACGTCACTCGTGTCTGCATCCG
CGATACGAAACTCTCTAGCGGCGTGACCGTGCCGGCCAACACCGAGGTGC
TCGTGCCCATTTGCCTCTTGAACCGGGACACGGACGAGTGGGGGGAGCCC
ATCGACGCCTTCGACCCGGACCGTTTCGAGGGCATCACGCGGGAGTCGCC
GTCGAAAGGATACTTCCCCTTTGGCTACTCCACCAGGTCGTGCATCGGCG
CCACACTGGCCTTGACGGAAGGAACGGTTATGATCACGCTATTAGCACAG
CGCTTTACGTTCTACGAGGAACCGTCGTTCAAGTTGAAACTGAAGAGCGG
CATCACAATGGTGTCTTCAAACGGGGTCAAAGTGCGCGTGGAGAGAGATA
CCTCGTATGCCTCATCCTGA
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protein sequence of rna133

>rna133-protein ID=rna133-protein|Name=rna133|organism=Nannochloropsis gaditana|type=polypeptide|length=152bp
MGINSKELRNRSTQQGAGEGTCWGEEGGKSEEARDRRGTKQEVGRTEGEE
EAPYIWEDQQEIEREKHQFRPVCRLSDCPDKSKLLDKDSKSLDVWDRRIV
LGLLMGALYTILTLWVMERSAKMVAGRDGPAVDIQRTPSLVFPFHSPEGM
NR
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mRNA from alignment at CM002455.1:351498..352048+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna133 ID=rna133|Name=rna133|organism=Nannochloropsis gaditana|type=mRNA|length=551bp|location=Sequence derived from alignment at CM002455.1:351498..352048+ (Nannochloropsis gaditana)
ATGGGGATAAACTCGAAGGAATTGCGGAATCGCAGCACGCAGCAAGGGGC
TGGAGAAGGCACGTGCTGgggcgaagagggtggaaagagtgaggaagcga
gagacaggaggggaacAAAGCAGGAGGTTGGACgaacggaaggagaagaa
gaggcacCGTACATATGGGAGGATCAACAAGAGATAGAACGGGAAAAGCA
CCAGTTTAGACCTGTCTGTCGTTTAAGCGACTGCCCCGACAAATCAAAAT
TATTAGATGTGGGTTAAGACACGAAGACTAGGATAGAGactgagaggagg
gaagaaggacagcAAGTCGTTGGACGTGTGGGACCGGAGGATCGTGTTGG
GGCTGCTGATGGGTAAGATTCATCGTGTGTGAGGATCAGTAAATGTTGCG
GGTATGAGGCGCTCTTTATACAATTCTGACATTGTGGGTAATGGAACGAA
GCGCTAAAAtggtggcagggagggacgggcctGCGGTCGACATCCAAAGG
ACGCCGTCCTTggttttccctttccattctcCTGAAGGAATGAATCGTTA
G
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Coding sequence (CDS) from alignment at CM002455.1:351498..352048+

>rna133 ID=rna133|Name=rna133|organism=Nannochloropsis gaditana|type=CDS|length=1377bp|location=Sequence derived from alignment at CM002455.1:351498..352048+ (Nannochloropsis gaditana)
ATGGGGATAAACTCGAAGGAATTGCGGAATCGCAGCACGCAGCAAGGGGC
TGGAGAAGGCACGTGCTGgggcgaagagggtggaaagagtgaggaagcga
gagacaggaggggaacAAAGCAGGAGGTTGGACgaacggaaggagaagaa
gaggcacCGTACATATGGGAGGATCAACAAGAGATAGAACGGGAAAAGCA
CCAGTTTAGACCTGTCTGTCGTTTAAGCGACTGCCCCGACAAATCAAAAT
TATTAGATaaggacagcAAGTCGTTGGACGTGTGGGACCGGAGGATCGTG
TTGGGGCTGCTGATGGGCGCTCTTTATACAATTCTGACATTGTGGGTAAT
GGAACGAAGCGCTAAAAtggtggcagggagggacgggcctGCGGTCGACA
TCCAAAGGACGCCGTCCTTggttttccctttccattctcCTGAAGGAATG
AATCGTTAGATGGGGATAAACTCGAAGGAATTGCGGAATCGCAGCACGCA
GCAAGGGGCTGGAGAAGGCACGTGCTGgggcgaagagggtggaaagagtg
aggaagcgagagacaggaggggaacAAAGCAGGAGGTTGGACgaacggaa
ggagaagaagaggcacCGTACATATGGGAGGATCAACAAGAGATAGAACG
GGAAAAGCACCAGTTTAGACCTGTCTGTCGTTTAAGCGACTGCCCCGACA
AATCAAAATTATTAGATaaggacagcAAGTCGTTGGACGTGTGGGACCGG
AGGATCGTGTTGGGGCTGCTGATGGGCGCTCTTTATACAATTCTGACATT
GTGGGTAATGGAACGAAGCGCTAAAAtggtggcagggagggacgggcctG
CGGTCGACATCCAAAGGACGCCGTCCTTggttttccctttccattctcCT
GAAGGAATGAATCGTTAGATGGGGATAAACTCGAAGGAATTGCGGAATCG
CAGCACGCAGCAAGGGGCTGGAGAAGGCACGTGCTGgggcgaagagggtg
gaaagagtgaggaagcgagagacaggaggggaacAAAGCAGGAGGTTGGA
CgaacggaaggagaagaagaggcacCGTACATATGGGAGGATCAACAAGA
GATAGAACGGGAAAAGCACCAGTTTAGACCTGTCTGTCGTTTAAGCGACT
GCCCCGACAAATCAAAATTATTAGATaaggacagcAAGTCGTTGGACGTG
TGGGACCGGAGGATCGTGTTGGGGCTGCTGATGGGCGCTCTTTATACAAT
TCTGACATTGTGGGTAATGGAACGAAGCGCTAAAAtggtggcagggaggg
acgggcctGCGGTCGACATCCAAAGGACGCCGTCCTTggttttccctttc
cattctcCTGAAGGAATGAATCGTTAG
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Synonyms
Publications