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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100028g38.3306.mrna |
| Orig protein id | gnl|cribi|Naga_100028g38.3306 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:319626..320948 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1318 ID=rna1318|Name=rna1318|organism=Nannochloropsis gaditana|type=mRNA|length=1110bp
ATGTATGAGAGTGGTCCCTCCTATTTTGCCTGGCTGACCGCGGGGTGGTC
GAGGCGGGACGACGGGCGGGGCACACGCTTGGAGGAGAGGGATGGCTGCC
TTGCAATAGTCGGAGACAGTCGGTTTGGCTTTGGTTGTTGCACGATTACG
CCCGTGGCCTGTTCAATGGCTCGAATCTTTGGTTTGGCTTTGGTGGCCCT
GGCTGTTAGCAGCACTACCCGTGCTTTTGCCACAGGCCCACAAAATGTTT
TTAAATCTACAATCCATGGTGGGCTACGACCTCGGAAAACTCCCATGCTG
GCCTCGCTTTGCTCCGCGCCACATCATCACGTCTTGAATGTCGGAAAAGG
GATGCCTGTCTCGAACCGCCCTCTCCCATCCTCCTCCTTGGCTGCCGCTC
CTTCATCTATTTCCTCCATTGTACCGATTTTATTTCGCCGAGGTGGTGTA
GCGATCCCCGCCGCCCCTGGCAAGGGCTTCGACTTCCTCACTCTCTTGAG
CAGAACCACTGGGTATGTCGTCATTGCTGGCTCGATGCTCTTCAAGCTCC
CCCAGGCCGCGCGCATTTTTCGCAAGAAATCGGCTGCAGGCCTTTCATCT
TCCATGTACATCCTGGAAACCATAGGAATAGCCATGTCGCTGGCTTTTTC
CATCCGAAACGCCTTCCCATTCTCCACCTACGGCGAGACCGTCTTCATTG
TGCTGCAGAACGTCGTGATCATGGCTGGTATCTCCCTGTACTCGGATGAG
CCCAGTCCTCCCATCCTTGCCCTTTCCCTCCTCCTTGCCTCGCTCTTTTT
TGCGTACACAATCAGCCCCCTCGCCCCGATGCTACTTGTATCGATTCTTC
AGACCGTCTCGATCCCTCTCTTGAATTTCAGTCGAGTGCCACAGCTCCTT
CTCAACTACCGCAACAAGAGCACGGGAGAGCTTGCGCCATCCACCTTGAT
CCTCCAGGCCGTCGGCAACGTGGCCCGCATCTTCACAACCATGGTCCAGC
TTCAAAATACTCTATACCTCCTTAGTTGTGTGGCGGCGTTCATTTTCAAT
GGGGCGCTAGTAGCGCAGTACTATCTCTACCGTGACAGAGCGTCGATGAA
GGACGCGTGA back to topprotein sequence of rna1318 >rna1318-protein ID=rna1318-protein|Name=rna1318|organism=Nannochloropsis gaditana|type=polypeptide|length=440bp
MMRYVAMETRQAIKRDFDDFSQGRPSFRSFAIQHRLSYELNAAPRRCRVK
PLMGGLLGVRLYELESFAWFAPLLDFLAAQWWEVAVIMFCEEVRREEGAQ
ERGRLEAYLKEAGKSLARRRAVMTSLIGSVHLRSYDQAETQVGRLGPRYG
HLMMVLNIHGNGEVVFRRVRERRKGRGTEGDGEEGEEGGKGGTKGREDGK
DGSRVEDGEGKEGEEERGGLEAGGQGGGEEKREGEGEKEGEKEEVEEEEV
LRLPLKSGDVYCYTGKYRYGCAERVELNAKASPYRCFIAFRFWIPGREWL
VRMSKAEGASEGGADGRFVGWRKLEKEDKERDTRWGQGNKTAARPSYAGL
SRVLSEADGGGGEGGKGKGKGKGKGKEGQGESRAEKGKETADRERGGAME
VEETSVPEPCAALGKEGERQGDVEEEREGEGATEMVAMQV back to topmRNA from alignment at CM002457.1:319626..320948- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1318 ID=rna1318|Name=rna1318|organism=Nannochloropsis gaditana|type=mRNA|length=1323bp|location=Sequence derived from alignment at CM002457.1:319626..320948- (Nannochloropsis gaditana)
ATGATGCGGTACGTGGCAATGGAGACCCGCCAGGCGATCAAACGCGACTT
TGACGATTTCTCGCAGGGCCGCCCCAGCTTTCGGTCCTTTGCCATCCAGC
ACCGGTTGAGCTACGAGCTGAACGCCGCGCCCCGTCGGTGTCGGGTGAAA
CCCTTGATGGGAGGCCTCTTAGGGGTGCGCCTTTACGAATTGGAGAGCTT
CGCCTGGTTCGCGCCCCTGTTGGATTTCTTGGCGGCGCAATGGTGGGAGG
TGGCCGTGATCATGTTCTGCGAGGAGGTCCGGCGGGAGGAAGGGGCTCAG
GAGCGGGGGAGGTTGGAGGCGTACCTGAAGGAAGCAGGGAAGAGCCTGGC
GCGGCGGCGGGCGGTCATGACGTCCTTGATTGGTTCGGTGCATCTCCGGA
GTTACGACCAGGCGGAGACGCAGGTGGGCCGGCTGGGTCCTCGGTACGGG
CATCTGATGATGGTTTTGAATATCCATGGGAACGGAGAAGTGGTGTTTCG
GAGGGTGAGGGAGAGGAGGAAAGGGAGGGGCACGGAGGGGGATGGGGAGG
AGGGGGAGGAGGGGGGCAAAGGGGGAACGAAAGGAAGGGAGGACGGGAAG
GACGGAAGCCGTGTGGAGGACGGGGAAGGAAAGGAGGGCGAGGAGGAAAG
GGGCGGGTTGGAGGCAGGAGGACAGGGGGGGGGCGAAGAAAAGAGGGAGG
GAGAAGGTGAGAAGGAGGGGGAGAAGGAAGAAGTGGAGGAAGAGGAAGTG
CTGCGCCTCCCCTTGAAATCGGGTGACGTGTACTGCTACACAGGAAAGTA
TCGGTATGGGTGTGCGGAGCGTGTGGAATTGAATGCGAAGGCCTCGCCAT
ACCGATGTTTTATCGCCTTCCGGTTCTGGATACCCGGGCGGGAGTGGCTG
GTTCGGATGAGTAAGGCGGAGGGGGCGAGTGAGGGAGGGGCGGACGGCAG
GTTTGTCGGCTGGCGGAAATTGGAGAAGGAAGACAAAGAGAGAGACACCA
GGTGGGGTCAAGGGAATAAAACTGCGGCTCGCCCCAGCTACGCCGGCTTG
AGTCGCGTGCTGTCCGAGGCCGACGGAGGAGGGGGGGAGGGCGGGAAGGG
GAAAGGGAAGGGCAAAGGGAAAGGGAAGGAAGGACAGGGCGAGTCGAGGG
CCGAGAAGGGGAAGGAAACGGCTGATAGGGAACGAGGGGGAGCGATGGAG
GTGGAGGAGACATCGGTACCGGAGCCATGTGCTGCCTTAGGCAAGGAAGG
TGAGAGACAAGGCGATGTGGAGGAGGAGAGGGAGGGAGAGGGAGCGACGG
AGATGGTGGCGATGCAAGTGTAG back to topCoding sequence (CDS) from alignment at CM002457.1:319626..320948- >rna1318 ID=rna1318|Name=rna1318|organism=Nannochloropsis gaditana|type=CDS|length=1323bp|location=Sequence derived from alignment at CM002457.1:319626..320948- (Nannochloropsis gaditana)
ATGATGCGGTACGTGGCAATGGAGACCCGCCAGGCGATCAAACGCGACTT
TGACGATTTCTCGCAGGGCCGCCCCAGCTTTCGGTCCTTTGCCATCCAGC
ACCGGTTGAGCTACGAGCTGAACGCCGCGCCCCGTCGGTGTCGGGTGAAA
CCCTTGATGGGAGGCCTCTTAGGGGTGCGCCTTTACGAATTGGAGAGCTT
CGCCTGGTTCGCGCCCCTGTTGGATTTCTTGGCGGCGCAATGGTGGGAGG
TGGCCGTGATCATGTTCTGCGAGGAGGTCCGGCGGGAGGAAGGGGCTCAG
GAGCGGGGGAGGTTGGAGGCGTACCTGAAGGAAGCAGGGAAGAGCCTGGC
GCGGCGGCGGGCGGTCATGACGTCCTTGATTGGTTCGGTGCATCTCCGGA
GTTACGACCAGGCGGAGACGCAGGTGGGCCGGCTGGGTCCTCGGTACGGG
CATCTGATGATGGTTTTGAATATCCATGGGAACGGAGAAGTGGTGTTTCG
GAGGGTGAGGGAGAGGAGGAAAGGGAGGGGCACGGAGGGGGATGGGGAGG
AGGGGGAGGAGGGGGGCAAAGGGGGAACGAAAGGAAGGGAGGACGGGAAG
GACGGAAGCCGTGTGGAGGACGGGGAAGGAAAGGAGGGCGAGGAGGAAAG
GGGCGGGTTGGAGGCAGGAGGACAGGGGGGGGGCGAAGAAAAGAGGGAGG
GAGAAGGTGAGAAGGAGGGGGAGAAGGAAGAAGTGGAGGAAGAGGAAGTG
CTGCGCCTCCCCTTGAAATCGGGTGACGTGTACTGCTACACAGGAAAGTA
TCGGTATGGGTGTGCGGAGCGTGTGGAATTGAATGCGAAGGCCTCGCCAT
ACCGATGTTTTATCGCCTTCCGGTTCTGGATACCCGGGCGGGAGTGGCTG
GTTCGGATGAGTAAGGCGGAGGGGGCGAGTGAGGGAGGGGCGGACGGCAG
GTTTGTCGGCTGGCGGAAATTGGAGAAGGAAGACAAAGAGAGAGACACCA
GGTGGGGTCAAGGGAATAAAACTGCGGCTCGCCCCAGCTACGCCGGCTTG
AGTCGCGTGCTGTCCGAGGCCGACGGAGGAGGGGGGGAGGGCGGGAAGGG
GAAAGGGAAGGGCAAAGGGAAAGGGAAGGAAGGACAGGGCGAGTCGAGGG
CCGAGAAGGGGAAGGAAACGGCTGATAGGGAACGAGGGGGAGCGATGGAG
GTGGAGGAGACATCGGTACCGGAGCCATGTGCTGCCTTAGGCAAGGAAGG
TGAGAGACAAGGCGATGTGGAGGAGGAGAGGGAGGGAGAGGGAGCGACGG
AGATGGTGGCGATGCAAGTGTAG back to top
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