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Properties
| Property Name | Value |
|---|
| Product | Interferon-related developmental regulator domain-containing protein |
| Orig transcript id | gnl|cribi|Naga_100028g13.3323.mrna |
| Orig protein id | gnl|cribi|Naga_100028g13.3323 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:275747..277499 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1299 ID=rna1299|Name=rna1299|organism=Nannochloropsis gaditana|type=mRNA|length=2373bp
ACAGCCCGACGGACTGTCTCGTAATTTCCTCCCGAAAAAGAACATATCGC
TACGCGTTCTAGTCGAAAAACGCGGCAAGCTGCCCATGGCCCTGTGCCCT
TGACGAACCGAGGCTCTGCCGCATCAATTTTACCTCCCCGTACCGTCAGG
AGCCACTTCCTCAGGCTCCATGGGGTGCAAAATGATGGCGCAAGCTTTCA
TCGTCTGCCTTCTCACCTTGGCAACGTCCCATTTGCTACCATGCACTGCA
TTTATGCGCCCTTTTCCACAGCCGTCGCATGCTGCACGGGGTTTGGGTGG
GGGCCGGCCACGTCAAGGCAGTATGGTCATGCAAGAAAGCTCGTCCTCCA
AAAAAGGATGGCCCGTGGGCCGTGCCCTCCGGACATTTCTCTCCTTCAAC
GGCCCACGTTTCCTGAGCGGGCGACGGAAGAAGAAGACGAGCGGGGGAGT
TGGACTTGCCACGGCTACGACGGTCACCCCGCAATTAGGCGCTGATTTGC
CCGTAGGGCACGGGATCGTTCTGGTCACGGGAGCCACGGGTGGGGTCGGC
CGCCGCGTGGTCAGCCTTCTGTTGGAAAAGGGGATACGTGTCCGGGCCCT
GGCCCGGAATGAACAGAAGGCCTTGGCCATGTTGAATGGAGGGCAAAAGC
CAGAGCCGGGGGCTTTGTTAGAAATTGTCAATGCCGACATCCGCGACCCC
GCAGCCCTGACGCCCGAGTTAATGGAGGGCGTGACCGCCGTAATCGGATG
CACGGCGGCAATCGTGCAACCCAAGTCCGGCGACTCGGAGGACCGGGCGA
AGTACTACCAAGGCATTGTCTTCTACGAACCGGAGACGTTGGACTCGCCC
GAGGAGACCGATTTTGTCGGCGTGAAGAATGTCTTGGCCGCCGCCAGCAA
GTACGCGGATGTGAAGGGTTGCAAGAAATTGTACAATTGTGCGCCGGCAT
TCATAGACCGCTGGCAAGACTTCGCGTCCCTCGACGACGTGGTGATGGGG
GGCACCTCGGATTCGAAATTCACTTTGGTACCGGGGGCGGGAGAGGCCGG
GAACGAGGACAGCCCGAGCCGAATCGCTGGGGTGTTTGAAGGGATGGTGA
CTACTGAGAGGGGCTTTGCCAGCGGGGGGTTCACGTCCGTGCGGACCCGG
AATTTGGAGCCGCCCTTGGATTTGACGGGCTATGAGGGCCTGCGCCTGCG
AGTCTTGGGGGACGGGAATACCTATAAGATCATTCTGCGCGACTCAGACC
AGTGGGACGGACCTTCCTGGAGCACCATGGTGCCCACTCAGGCGGGGGAA
TGGGCAGATTTGGACGTGCCGTTCACGTCCTTGATACCTGTGGCCCGGAC
ACGGAGCATCCCGGCGGACCAACGTCAAGCCTTTCGCTTGGATCAAATCT
TTGCCATCCAGATCATGCTGAGTAAGTTTGCCTACGACGGAGAGGTGAAC
CCGACGTACAAGGACGGACCTTTCAAGCTCGTCATCCAGTCGATCGAGGC
CTACATGGGCCCCAGTGCCCCTCGGACTCCTCGATTCGTCCACATCTCCT
CGGCGGGGGTGGAGCGACCCGGGCGGCCGGGGGTCGTCTTGGAGGAGGAA
CCGCCCGCCGTGCGCATGAATGACATGCTGGGTGGGATCCTCACCTACAA
GCTCAAGGGGGAAGAGGCGATTCGCGCCAGTGGTCTGCCGTACACGATCA
TTCGGCCTTGCGCCCTGACCGAAGAGCCGGCCAACATGCCCTTGGAGGTG
GACGTAGGGGATACCATCAAAGGGAAGGTGAGCCGTGATGACGTGGCACG
TCTGGCGGTGTACGCCTTGGCGTGTCCGGAGGCGACCGATTTGACGTTCG
AGGTGAAGAGTTCCCTGGCTTTTTCGCAGCAGTGGACGGCGGAAGATGCG
GCCCGGGCCCCTGTGACGGACATGACTCAAGTGTTTGCTCAAGTCAAAAG
CCTGAGCCAAAAATAGCTTGGGGAGGCACGTTTGGTTCGGCATACACACA
CAGGACGGTTTTTTATTTTTTGATCGAGTAGCACTGGGCGTATTTCGTTT
GACCGTCCCCGAAGATGTTTGACTAAGGCGCGGCGACAAAACTGTCATGT
ATGCGTTCGGGCAAAAGCCCGCCTCAGTACGGCTTTTCCCACCTATCTTT
TTCTTTACAGTTCGCTTTTAATGACTTATACACATGTGTACTGGCACCAT
TTTGGCGCGACAAGACAGTGTCTCATGACTTGGAGCTTCCGCAAGTTTGC
TTTTACTCGCTTTCATTCGTCTCCCTGTTCCTCATTGCGTAGAAAAGTTG
ACGTATTCGTGCACAGCTGTTCCCTTGATATTCTGGAACCTACGGCCCCC
TTCTGTCCCTCCTCCGATTATCT back to topprotein sequence of rna1299 >rna1299-protein ID=rna1299-protein|Name=rna1299|organism=Nannochloropsis gaditana|type=polypeptide|length=399bp
MSFLSQETFEASTPAGVEETTAPGAGAAASSRNNGDFADLLEKLNEKRTT
AREDCLRELIAGLRSYTFVDQAIANRESVFSSLVGLLRRSRETEGVLCAE
ALGMMMLLIGPEEDEIFNLVRAPLEFVITRGQSERMRIEATRALALGSFI
CNTEEERTLAHLAFFEALFTGESEGGRASEELKAAGVDAWSLLFTVAPRG
YNTHESRALLLENFLHLLDASSADLRVAAGEAIALLREHWRQEGLAVHDV
SADEEEVVDSIVDRLQDMAREGSKRMSRKDKKAQRASFREICSAVVDGQR
PEEVISYRTRSFRLTSWVKMKQVEALRDCLQGGFLTALAQNTVIHDIFDL
DPTAFDVPVERSVVAKNSELGRWRTTTRSRNRRSREKAKHHFTEEGEDA back to topmRNA from alignment at CM002457.1:275747..277499+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1299 ID=rna1299|Name=rna1299|organism=Nannochloropsis gaditana|type=mRNA|length=1753bp|location=Sequence derived from alignment at CM002457.1:275747..277499+ (Nannochloropsis gaditana)
cttGACAGGCCGTGCACAAGTGAAGCCGTCGACCTCACATCTCCCGCGTC
CCGCCTACAACTATTTGCACTTACTTCAGGCAGAGAAGATATGGGCAAGA
AGAGTAAGTAGGAAGTTTGAAGGGATGGTGTCCTCCAATTAGTGACAACT
TTCTTATTTTGCGAATCTGCAGGTGCGCGTGCACTGGCGGCGGCCCAAAG
ACGTGCcggcaggggaggtggactGACGAGCGATGATGAAAGGGAAAGCG
TGGCTTCAGACAtgtctttcctttcacaAGAAACCTTCGAGGCTTCCACA
CCAGCTGGTGTCGAAGAAACAACGGCGCCAGGAGCTGGTGCAGCTGCGTC
AAGTAGGAACAACGGTGATTTTGCTGACTTGCTTGAAAAGCTGaatgaga
agaggacgacggctCGAGAGGATTGTTTGCGGGAGCTTATAGCGGGTCTT
CGATCGTACACATTCGTGGACCAGGCCATTGCCAACCGTGAGTCGGTATT
CTCGAGCCTAGTGGGACTGCTCCGGCGTTCCCGAGAAACGGAGGGGGTGT
TGTGTGCAGAGGCCTTGGGCATGATGATGCTGTTAATAgggcccgaggag
gacgaaataTTCAATCTTGTCCGAGCTCCTTTGGAATTTGTGATAACCCG
CGGTCAGTCGGAAAGGATGCGGATCGAAGCCACCcgcgccctggccctgg
ggTCGTTCATATGcaacacggaggaggagaggacacTGGCGCACTTGGCC
TTCTTTGAAGCCCTCTTCAccggggagagcgagggagggcgggcgtcgGA
GGAGCTAAAAGCGGCGGGTGTAGATGCCTGGTCCTTGCTTTTTACGGTGG
CGCCGAGAGGCTACAATACCCACGAATCTAGAGCCCTCCTACTGGAaaac
ttcctccatctcttggATGCGTCCTCGGCGGACCTGCGGGTTGCCGCGGG
CGAGGCGATTGCCTTGCTTCGCGAACATTGGCGGCAGGAAGGGCTGGCCG
TGCACGACGTCTCggcggacgaagaggaggtggtggacagCATTGTGGAC
CGGCTCCAGGACATGgcgcgggaagggagcaagcgCATGAGTCGGAAGGA
CAAAAAGGCCCAACGTGCCTCTTTTCGCGAGATCTGCTCGGCAGTGGTCG
ACGGCCAACGTCCCGAGGAAGTGATTAGCTACCGCACTCGGAGTTTTCGT
TTGACTTCGTGGGTGAAGATGAAGCAAGTGGAGGCCCTCCGGGACTGCCT
GCAGGGGGGCTTCTTAACGGCCTTGGCCCAAAATACCGTCATCCACGACA
TTTTTGACCTCGACCCCACAGCCTTCGACGTGCCCGTGGAACGGAGCGTG
GTGGCTAAGAACAGCGAGCTGGGTCGGTGGCGGACCACCACACGGTCCAG
AAATCGTCGGTCCCGGGAGAAGGCCAAGCACCACTTtaccgaggaagggg
aggacgcgtgAGACTGGCTTGACACGAGCGGGTGGCCAGCGGAAGATCCT
GATAGGTCAACATCCCCTGCGTATGTGACGATGTAAACGGGACATGAACC
TATCAGAAGCCACGGTATCTTGGATCGGAGTGCCTGTGACGGTTCTGGGC
GTGGTCTGGGGCCGGTGTGTGGGACAGAGAAGATGGGGCCGCGAGGGCAG
GCATCGAAGCAAAATCATAATCCAAATGGCGGTGGGCTACGGGAAACAAG
GGGGGGGTTTGAATGATGGTAATGGTAGGAGGCCAGTTGTCAAAGAAATA
ACT back to topCoding sequence (CDS) from alignment at CM002457.1:275747..277499+ >rna1299 ID=rna1299|Name=rna1299|organism=Nannochloropsis gaditana|type=CDS|length=1200bp|location=Sequence derived from alignment at CM002457.1:275747..277499+ (Nannochloropsis gaditana)
AtgtctttcctttcacaAGAAACCTTCGAGGCTTCCACACCAGCTGGTGT
CGAAGAAACAACGGCGCCAGGAGCTGGTGCAGCTGCGTCAAGTAGGAACA
ACGGTGATTTTGCTGACTTGCTTGAAAAGCTGaatgagaagaggacgacg
gctCGAGAGGATTGTTTGCGGGAGCTTATAGCGGGTCTTCGATCGTACAC
ATTCGTGGACCAGGCCATTGCCAACCGTGAGTCGGTATTCTCGAGCCTAG
TGGGACTGCTCCGGCGTTCCCGAGAAACGGAGGGGGTGTTGTGTGCAGAG
GCCTTGGGCATGATGATGCTGTTAATAgggcccgaggaggacgaaataTT
CAATCTTGTCCGAGCTCCTTTGGAATTTGTGATAACCCGCGGTCAGTCGG
AAAGGATGCGGATCGAAGCCACCcgcgccctggccctggggTCGTTCATA
TGcaacacggaggaggagaggacacTGGCGCACTTGGCCTTCTTTGAAGC
CCTCTTCAccggggagagcgagggagggcgggcgtcgGAGGAGCTAAAAG
CGGCGGGTGTAGATGCCTGGTCCTTGCTTTTTACGGTGGCGCCGAGAGGC
TACAATACCCACGAATCTAGAGCCCTCCTACTGGAaaacttcctccatct
cttggATGCGTCCTCGGCGGACCTGCGGGTTGCCGCGGGCGAGGCGATTG
CCTTGCTTCGCGAACATTGGCGGCAGGAAGGGCTGGCCGTGCACGACGTC
TCggcggacgaagaggaggtggtggacagCATTGTGGACCGGCTCCAGGA
CATGgcgcgggaagggagcaagcgCATGAGTCGGAAGGACAAAAAGGCCC
AACGTGCCTCTTTTCGCGAGATCTGCTCGGCAGTGGTCGACGGCCAACGT
CCCGAGGAAGTGATTAGCTACCGCACTCGGAGTTTTCGTTTGACTTCGTG
GGTGAAGATGAAGCAAGTGGAGGCCCTCCGGGACTGCCTGCAGGGGGGCT
TCTTAACGGCCTTGGCCCAAAATACCGTCATCCACGACATTTTTGACCTC
GACCCCACAGCCTTCGACGTGCCCGTGGAACGGAGCGTGGTGGCTAAGAA
CAGCGAGCTGGGTCGGTGGCGGACCACCACACGGTCCAGAAATCGTCGGT
CCCGGGAGAAGGCCAAGCACCACTTtaccgaggaaggggaggacgcgtgA back to top
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