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Properties
| Property Name | Value |
|---|
| Product | phosphoserine aminotransferase |
| Orig transcript id | gnl|cribi|Naga_100028g10.3290.mrna |
| Orig protein id | gnl|cribi|Naga_100028g10.3290 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:268485..270586 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1296 ID=rna1296|Name=rna1296|organism=Nannochloropsis gaditana|type=mRNA|length=1917bp
ATGAGTAAATTGTGGACATTCACTATGTTTCTGTGCGACGTGAATAAGTG
GACACGAAGAATTTTCCGTGCCCGCTTTCTGACCAACGATGCCTTTCTTG
CTTTGCTTCCTTCCACCTTCGCGAATCCTTCTAATTCCACCCCTCCGCAA
TCGTGGCAAAGGCAAAACAGGGCGATGATGTCGGCCGTATCGCGATGCAA
GGGATTTTATCTACTGTTGAGCCTTGCTATACTATGTAATTTATCACACG
GGGCTTTGCCCAAGCTACCAGGCACTGCCCTCGTTCAACGCTTCATCAAG
GGCAGACAAGCAGACCCCCGAGACCATGGCGCTGATATTGCTTCTTCAGA
AGAGGACTTTCACCAAGCCACTGCTCCGGTATTGGCAGAGGATATCGCTG
AGGCCATAAAGCCACCACGTCGCCGAAAACGCGACGTGGTGCGTTCCCGG
TTCGGTAAGATTCGCGCTGCAGTCTTCCCCATCGAAAACAAGGAATGCCA
AAAATTCTTTATGATGAGCGGTATGATGTTTTTCATCATCTACGTCTACA
CGGTGGTCCGCGATACCAAGGATACCTTGATCGTCTCCACTTGTGGGGCC
GAAGCCATCACCTTCCTCAAGGTCTACGGCGTACTGCCGGCCTCCGCCCT
CTTCATGATCCTTTACGCCAAGGCCTCCAACGTCTTGGGGAAGAAGGCCC
TCTTCTATGCCACTTCGGTCCCTTTTTTCCTCTTTTATGCTGCCTTCTGC
ACCCTCATTTACCCCAATCGTGCCCATCTCATGCCTCACATCGACGCACA
AGCGGGAGGCCTCGGCTTCCTCGTCTCTCTGGTCAAAAACTGGGACTATT
CCCTCTTCTACATTGTCTCGGAGCTCTTTGGGAGCGTGGGCGTGTCGGTC
CTGTTTTGGCAGCTGGCGAACGAGATCATCAAGGTGCACGAGGCCAAGCG
CTTTTATCCGCTATTTGGGCAGCTCGCCAACATCGCCCCGATTGCCGCCG
GTCAAACAGTAGTGCTCTCGGCCCATATGACGGACCCTGCTAGCAAGGAT
CCTTTCTTGAAAAGCATCCAGCTTATCACCGTCTTTATCATGATAAGTGG
AGCGGCAATCATGTCTTTGTACCGAGGAATCACAGGTCTGGTGGAGCGGG
AGGACGCGGCGGCCTTGGCCGTTGGGGGAGAAACCTCGGCAAGCACCACC
GCGGTGGCGAGCAAGAGGAAGAAGAAGCCCAAGATGAGCTTGGCAGAGAG
CTTCAAGTTCCTGCTCACGAACAAATACCTTGGATGCATGGCTATTCTGG
TAGTGTCGTACGGTCTGGCGATCAACTTTACGGAGGTTATGTGGAAGAGT
CAAGTGAAGCTCCTATACAAGGACAAGCGCAAGTACCAGCAATTCATGGG
TAACTACTCGACCATGATGGGGGCTACCACCTTCATCGTCATTTTTTTCG
GGTCACAGATCGTGAAACGCTTTGGCATGAAGGTGGGGGCCCTGACCACG
CCCGCCATGCTGGGTCTCCTGGCGGCGCCCTTCTTTGGGTACATCGTCTT
CGGGGGAATATCCAGTACAGGGGCTTCTTCACCCAAGGCCTTGCAGACGG
CTGTGTGGGTGGGTCTAGTGCAAAACATTCTCTCCAAATCGATCAAATAT
GCCCTGTTTGACCCGACGAAGGAAATGGCGTACATTCCTCTCGGTCAAGA
GGAGAAAACCAAGGGCAAGGCGGCCATTGACGTATTGGCAGCCCGCATCG
GAAAGAGCGGAGGGGCTCTCTTGCAGCAGGCCATTGTGCTCTTCTTTGGT
AATATCATCGATGGGGCTCCAGTGGTGGTGGGTCTCTTCTATATTGTCAT
CTTTGCCTGGCTGTTTGCGGCAAACAGCCTCGGAAATCAGTTCGAGGAAG
TATCGAAGAACAAGTGA back to topprotein sequence of rna1296 >rna1296-protein ID=rna1296-protein|Name=rna1296|organism=Nannochloropsis gaditana|type=polypeptide|length=443bp
MVLSHRPLSEPWIKNWFITAALLIAFLYCAEAYVPVGPPAMPKPSSPHFS
SGPTKKRPGYDLAKLPIDTLGRSHRSSECLGRIQRALELTRDILGIPGEF
RLALLPGGGDTGAFEAALWSLVGTKGVPVQALVWEAFGQGWYDDLTTQLK
VEEVELVSAPYGELPDLSQVSAGENDVCFVYNGTTSGVCLPDDGAPWIPP
SGAGKGRGLTLCDATSACFCMPLPWEKLDVTTFSWQKALGGEGAHGILVL
SPRALARLEENGRSGLLAARGIPKLLRLAPDPSTGTVPEGLWTGSTINTP
SMLCVEDYLDALQWAQEKGGLPALIARTRANLEAVEAFVAKKPWLSFLAS
NPRIRSSTSICLRIEGLEEAGSTARGGGSQVRHRLKEMAALMEREGVAYD
IASYREAPPGLRIWGGPTVETEDIRRLLPWIEWAYDRVKTTSG back to topmRNA from alignment at CM002457.1:268485..270586+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1296 ID=rna1296|Name=rna1296|organism=Nannochloropsis gaditana|type=mRNA|length=2102bp|location=Sequence derived from alignment at CM002457.1:268485..270586+ (Nannochloropsis gaditana)
ACCAGCTTCACTCTGTAGTAGTAGAATTTAAAAATCCATCGCAATCTATT
ACGTCTTCCAGTGAAGTGTGACAACGAGTTGATAGCTTTATGATTTATCA
TATCCGACACATGAAACGTCGATTTCATGACAGATATTAGCATGTAAGCG
AGATGGGCCTATTGACGCAATCTAATTACTCGTAGGACTTTTTGATACTT
TAAAGTGCAACATAATTACTTTGCCCTAAAAAGAGGTTGTTGATCCTGTT
TCTTAAATTATGATATGAAGCATGTGTCACTCTGACGCAGCAGGAGCACT
TGAAATGGATTTTAATCACAAGTGCTTCACCTGTCCCACAGCAGTCTGGA
ACGAGTAAGGGTACATACACACCAGCCACAAACTTTTTAAAATAAGATAT
TGGGTGAAGTTTTGCAGTCTATGGAATGCACTGGTACTTGTGACGTGCTT
AGTCTCGTTATATGTTTAACAATGTACCAGCACACTCGCGCGTCAGCACC
CCTTTTTGAGAAAACCCATGCGTTTCATAATTTTTATTGCTGAATTTGAA
TGCCAAGAATAAAAATCTATAGAtcaggaaaatggaagagTTCCGTCTTC
CTGCCACACCAACAGCTCGAGATTACTGTTCACTTGAGACACAGGGGCAC
CTTAAGGAGCTTGGTTTACACAACGCCCGATGGTCCTTTCGCACCGACCA
TTATCAGAGCCATGGATCAAAAACTGGTTCATCACAGCAGCACTATTAAT
CGCCTTCTTGTACTGTGCTGAGGCTTACGTCCCTGTGGGTCCTCCTGCTA
TGCCGAAACCATCCAGCCCTCATTTTAGCTCTGGTCCTACCAAAAAGCGT
CCGGGCTACGACCTTGCGAAACTTCCCATCGATACTCTGGGTCGTTCACA
CCGCTCTAGTGAATGCCTGGGACGTATACAACGCGCGTTGGAGCTGACGA
GGGACATTTTGGGTATCCCTGGAGAATTTCGACTGGCGTTGttgcctggg
gggggggacacaGGGGCTTTCGAAGCCGCGCTGTGGTCTTTGGTGGGCAC
GAAGGGAGTCCCCGTCCAAGCTTTGGTCTGGGAAGCATTCGGTCAAGGTT
GGTACGACGACTTGACGACTCAAttaaaagtggaggaggtggagctggtc
TCGGCGCCCTATGGAGAGCTCCCGGACTTGTCCCAAGTGAGCGCGGGAGA
GAACGACGTCTGTTTTGTTTACAACGGGACCACCAGTGGCGTCTGTCTTC
CTGACGATGGAGCACCCTGGATCCCTCCTTCTGGTGCAGGAAAGGGTCGT
GGCCTAACTTTGTGCGATGCTACGTCGGCGTGTTTTTGCATGCCGTTGCC
CTGGGAAAAATTGGACGTAACCACTTTCTCGTGGCAGAAGGCTttagggg
gggaaggagcgcaCGGAATACTGGTGCTCTCTCCGCGGGCTCTGGCACGT
TTGGAGGAAAACGGTCGTTCTGGGCTTCTGGCCGCAAGAGGGATCCCGAA
gcttctccgccttgcccccgatccctccaccggcaccgTGCCCGAAGGTC
TGTGGACCGGCTCCACGATCAACACGCCTTCCATGCTTTGCGTGGAGGAT
TACTTGGATGCCCTGCAATGGGCgcaggaaaaaggcggcCTGCCGGCTTT
GATTGCCCGGACTCGGGCGAATctcgaggcggtggaggcatTCGTGGCGA
AGAAGCCCTGGCTCTCTTTCTTGGCCTCGAATCCTCGCATCCGATCATCC
ACGAGCATATGCTTGAGGATAgagggattggaggaggcaggaagcactgc
aaggggaggaggctcacAGGTAAGACACAGACTGAAGGAGATGGCTGCGt
tgatggagagggagggcgtcgcGTACGACATCGCCTCCTACCGTGAAGCA
CCCCCCGGACTGCGGATATGGGGGGGACCGACCGTCGAGACGGAAGATAT
CCGAAGATTGTTGCCATGGATCGAATGGGCATACGACCGTGTAAAAACAA
CTAGCGGCTGAGCCGTGTCAAAAGAGAGCAGGGCGGTTTGGATGGGGAGA
GCACCGCTTCAAGAAACTATGGATGGTCAAGCGACCAAAACATACTTCTC
GA back to topCoding sequence (CDS) from alignment at CM002457.1:268485..270586+ >rna1296 ID=rna1296|Name=rna1296|organism=Nannochloropsis gaditana|type=CDS|length=1332bp|location=Sequence derived from alignment at CM002457.1:268485..270586+ (Nannochloropsis gaditana)
ATGGTCCTTTCGCACCGACCATTATCAGAGCCATGGATCAAAAACTGGTT
CATCACAGCAGCACTATTAATCGCCTTCTTGTACTGTGCTGAGGCTTACG
TCCCTGTGGGTCCTCCTGCTATGCCGAAACCATCCAGCCCTCATTTTAGC
TCTGGTCCTACCAAAAAGCGTCCGGGCTACGACCTTGCGAAACTTCCCAT
CGATACTCTGGGTCGTTCACACCGCTCTAGTGAATGCCTGGGACGTATAC
AACGCGCGTTGGAGCTGACGAGGGACATTTTGGGTATCCCTGGAGAATTT
CGACTGGCGTTGttgcctggggggggggacacaGGGGCTTTCGAAGCCGC
GCTGTGGTCTTTGGTGGGCACGAAGGGAGTCCCCGTCCAAGCTTTGGTCT
GGGAAGCATTCGGTCAAGGTTGGTACGACGACTTGACGACTCAAttaaaa
gtggaggaggtggagctggtcTCGGCGCCCTATGGAGAGCTCCCGGACTT
GTCCCAAGTGAGCGCGGGAGAGAACGACGTCTGTTTTGTTTACAACGGGA
CCACCAGTGGCGTCTGTCTTCCTGACGATGGAGCACCCTGGATCCCTCCT
TCTGGTGCAGGAAAGGGTCGTGGCCTAACTTTGTGCGATGCTACGTCGGC
GTGTTTTTGCATGCCGTTGCCCTGGGAAAAATTGGACGTAACCACTTTCT
CGTGGCAGAAGGCTttagggggggaaggagcgcaCGGAATACTGGTGCTC
TCTCCGCGGGCTCTGGCACGTTTGGAGGAAAACGGTCGTTCTGGGCTTCT
GGCCGCAAGAGGGATCCCGAAgcttctccgccttgcccccgatccctcca
ccggcaccgTGCCCGAAGGTCTGTGGACCGGCTCCACGATCAACACGCCT
TCCATGCTTTGCGTGGAGGATTACTTGGATGCCCTGCAATGGGCgcagga
aaaaggcggcCTGCCGGCTTTGATTGCCCGGACTCGGGCGAATctcgagg
cggtggaggcatTCGTGGCGAAGAAGCCCTGGCTCTCTTTCTTGGCCTCG
AATCCTCGCATCCGATCATCCACGAGCATATGCTTGAGGATAgagggatt
ggaggaggcaggaagcactgcaaggggaggaggctcacAGGTAAGACACA
GACTGAAGGAGATGGCTGCGttgatggagagggagggcgtcgcGTACGAC
ATCGCCTCCTACCGTGAAGCACCCCCCGGACTGCGGATATGGGGGGGACC
GACCGTCGAGACGGAAGATATCCGAAGATTGTTGCCATGGATCGAATGGG
CATACGACCGTGTAAAAACAACTAGCGGCTGA back to top
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