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Properties
| Property Name | Value |
|---|
| Product | carrier protein |
| Orig transcript id | gnl|cribi|Naga_100028g9.3281.mrna |
| Orig protein id | gnl|cribi|Naga_100028g9.3281 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:265621..267812 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1295 ID=rna1295|Name=rna1295|organism=Nannochloropsis gaditana|type=mRNA|length=1407bp
ATGTCAACAAGAGAAAACAGCATCCGTCCTTCCTCATCATGCCAGCAATT
GCATCCAACACATTTGATATATCGCATCACTGGCGCTGCGGCGCAAGCGC
GGATTGTTCCCTTGCTGCAGGAGAGGGCTGAAGTGCACTGGATTGCTGGT
AGATGTCAAAATGCATGTAATCAGGCTGATCCTCCTGTCCCCCTTGATTT
CGTCTGGGAGACCCATGTCGCGCGTCGGGATAAGCCCCTTCATGATTGTG
CCCGTGTTCTCAATCGTCTTTCCAACACTGTTATCCTGGAAAATAAGGCA
TACTTCTCTCACATTCTAGCGCTTGTATCCAGCCAAAATCAGGACATACC
CGTTCTGGAGACCGCAGTAGTTCGAGCCATGGATGCCCAAGCCTGGCTTG
ATGCACGCCGAAGACAATTACGGACAGTACAAAACGCAAATTACACCGTA
TTTACAGATTGCACCGAGGACGCGGAGGAATGGTGGATTCTTAAGGCCGC
TGGCGCTAATGGCGGAGGAGACGTTCATGTATTGCCCCCGGCCTGCACTC
ATGTCCCCGCGTGTATCGCCTTGCGACCTCTAGACTCGTACGTCGTCCAA
CGCTACATCACCAGACCTTTATTGCTAGAAAAAAAATATAAATTTCACTA
TCGGGTCTACGCTTTGTTGCGGATGACAGGGGTGGAGGAGACCGGACGCA
CGTCTGTGGACAGAGAAGCACGCAGGGCACGCTTCCAGCCTTGGATATAT
CAGCATGGCTTTATCCTTAGGGCCTCAGAAAGGTACCATCATGCCACAAA
ATGCGGATCGGCTAACGAGATTGACGCGGCTGCCCATTTAACGAATTTGT
CGTTGAACAAGCACTGTCCTGGGTACCCTGGTCAGCTTCCCATCGACCTG
GCACGGGCCCCTCGTACCTTTGGGTGCATGAAAGCTCATTGGGCAGCAGT
CGTGCGGGCAGCAGCACCTTTTTTGAGGGCACAGGCATCCTCAGGCCATT
TTGAGTTGTTTGGCCTGGATTATCTGCCAGTCGAAGCGGCGTGTGCGCCA
GAGGACATGATGCACCTCGACAAGTTTGACAGCATGTATCTCATGGAAAT
TAACCGCCTGCCTGGCCTGCAAAGCTCCCGACAGAATTCTGCCGACGAGG
ATGAGCTATATGATTGTATGATACGAGAGCTTCTGGACTTGTGCGTGATG
CCTTTCTTGTCGGGGACGGGGGCGAAAAACGACCACGAATCGAAGCAAGG
TGGATGGAGTGAGGTTGTAATTAAAGACGTTGACGAAAATATGTTCGTAG
ACTTGGCGAGCCCCGGTGATAAAGAAATCCACCACAACGTCCTTCGATGG
GCTATGCATATGCGAGCGTGTCGAAATTCTGTTAAAACAGCCATTTGTGA
AAAATGA back to topprotein sequence of rna1295 >rna1295-protein ID=rna1295-protein|Name=rna1295|organism=Nannochloropsis gaditana|type=polypeptide|length=638bp
MSKLWTFTMFLCDVNKWTRRIFRARFLTNDAFLALLPSTFANPSNSTPPQ
SWQRQNRAMMSAVSRCKGFYLLLSLAILCNLSHGALPKLPGTALVQRFIK
GRQADPRDHGADIASSEEDFHQATAPVLAEDIAEAIKPPRRRKRDVVRSR
FGKIRAAVFPIENKECQKFFMMSGMMFFIIYVYTVVRDTKDTLIVSTCGA
EAITFLKVYGVLPASALFMILYAKASNVLGKKALFYATSVPFFLFYAAFC
TLIYPNRAHLMPHIDAQAGGLGFLVSLVKNWDYSLFYIVSELFGSVGVSV
LFWQLANEIIKVHEAKRFYPLFGQLANIAPIAAGQTVVLSAHMTDPASKD
PFLKSIQLITVFIMISGAAIMSLYRGITGLVEREDAAALAVGGETSASTT
AVASKRKKKPKMSLAESFKFLLTNKYLGCMAILVVSYGLAINFTEVMWKS
QVKLLYKDKRKYQQFMGNYSTMMGATTFIVIFFGSQIVKRFGMKVGALTT
PAMLGLLAAPFFGYIVFGGISSTGASSPKALQTAVWVGLVQNILSKSIKY
ALFDPTKEMAYIPLGQEEKTKGKAAIDVLAARIGKSGGALLQQAIVLFFG
NIIDGAPVVVGLFYIVIFAWLFAANSLGNQFEEVSKNK back to topmRNA from alignment at CM002457.1:265621..267812+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1295 ID=rna1295|Name=rna1295|organism=Nannochloropsis gaditana|type=mRNA|length=2192bp|location=Sequence derived from alignment at CM002457.1:265621..267812+ (Nannochloropsis gaditana)
ATGAGTAAATTGTGGACATTCACTATGTTTCTGTGCGACGTGAATAAGTG
GACACGAAGAATTTTCCGTGCCCGCTTTCTGACCAACGATGCCTTTCTTG
CtttgcttccttccaccttcgCGAATCCTTCTAATTCCACCCCTCCGCAA
TCGTGGCAAAGGCAAAACAGGGCGATGATGTCGGCCGTATCGCGATGCAA
GGGATTTTATCTACTGTTGAGCCTTGCTATACTATGTAATTTATCACACG
GGGCTTTGCCCAAGCTACCAGGCACTGCCCTCGTTCAACGCTTCATCAAG
GGCAGACAAGCAGACCCCCGAGACCATGGCGCTGATATTGCTTCTTCAGA
AGAGGACTTTCACCAAGCCACTGCTCCGGTATTGGCAGAGGATATCGCTG
AGGCCATAAAGCCACCACGTCGCCGGTAGGACTTGAATAATGGGTTGAAG
GCTGTTTTTTTCCCTCATGACCAGAGCAGCGCTCATCAAGGAAAGCTTGT
GTTTCAAAGCTTATCTCCttttcgctcctccccccccccccatccctctc
aGAAAACGCGACGTGGTGCGTTCCCGGTTCGGTAAGATTCGCGCTGCAGT
CTTCCCCATCGAAAACAAGGAATGCCAAAAATTCTTTATGATGAGCGGTA
TGATGTTTTTCATCATCTACGTCTACACGGTGGTCCGCGATACCAAGGAT
ACCTTGATCGTCTCCACTTGTGGGGCCGAAGCCATCACCTTCCTCAAGGT
CTACGGCGTACTgccggcctccgccctcttcatGATCCTTtacgccaagg
cctccaacGTCTTGGGGAAGAAGGCCCTCTTCTATGCCACTTCggtccct
tttttcctcttttatGCTGCCTTCTGCACCCTCATTTACCCCAATCGTGC
CCATCTCATGCCTCACATCGACGCACAAGCGGGAGGCCTCGGCTTCCTCG
TCTCTCTGGTCAAAAACTGGGACTATTCCCTCTTCTACATTGTCTCGGAG
CTCTTTGGGAGCGTGGGCGTGTCGGTCCTGTTTTGGCAGCTGGCGAACGA
GATCATCAAGGTGCACGAGGCCAAGCGCTTTTATCCGCTATTTGGGCAGC
TCGCCAACATCGCCCCGATTGCCGCCGGTCAAACAGTAGTGCTCTCGGCC
CATATGACGGACCCTGCTAGCAAGGATCCTTTCTTGAAAAGCATCCAGCT
TATCACCGTCTTTATCATGATAAGTGGAGCGGCAATCATGTCTTTGTACC
GAGGAATCACAGGTctggtggagcgggaggacgcggcggccttggccgtt
GGGGGAGAAACCTCGGCAAGCACCACCGCGGTGgcgagcaagaggaagaa
gaagcccaAGATGAGCTTGGCAGAGAGCTTCAAGTTCCTGCTCACGAACA
AATACCTTGGATGCATGGCTATTCTGGTAGTGTCGTACGGTCTGGCGATC
AACTTTACGGAGGTACGCttgaggggagggcgccgggggtaggggggggg
gggggcgcgttGAGAGTGAGATGGATGAGGGtcctgtctcctccccggGT
GCCCACTTCCGTGTGTGTCGTCACTTTTATTCCCTCTTGgtccttcttcc
cgttcCACAGGTTATGTGGAAGAGTCAAGTGAAGCTCCTATACAAGGACA
AGCGCAAGTACCAGCAATTCATGGGTAACTACTCGACCATGATGGGGGCT
ACCACCTTCATCGTCATTTTTTTCGGGTCACAGATCGTGAAACGCTTTGG
CATGAAGGTGGGGGCCCTGACCACGCCCGCCATGCTGGGTCTCCTGGCGG
CGCCCTTCTTTGGGTACATCGTCTTCGGGGGAATATCCAGTACAGGGGCT
TCTTCACCCAAGGCCTTGCAGACGGCTGTGTGGGTGGGTCTAGTGCAAAA
CATTCTCTCCAAATCGATCAAATATGCCCTGTTTGACCCGACGAAGGAAA
TGGCGTACATTCCTCTCGGTCAAGAGGAGAAAAccaagggcaaggcggcc
aTTGACGTATTGGCAGCCCGCATCGGAAAGAGCGGAGGGGCTCTCTTGCA
GCAGGCCATTGTGCTCTTCTTTGGTAATATCATCGATGGGGCTCCAGTGG
TGGTGGGTCTCTTCTATATTGTCATCTTTGCCTGGCTGTTTGCGGCAAAC
AGCCTCGGAAATCAGTTCGAGGAAGTATCGAAGAACAAGTGA back to topCoding sequence (CDS) from alignment at CM002457.1:265621..267812+ >rna1295 ID=rna1295|Name=rna1295|organism=Nannochloropsis gaditana|type=CDS|length=5751bp|location=Sequence derived from alignment at CM002457.1:265621..267812+ (Nannochloropsis gaditana)
ATGAGTAAATTGTGGACATTCACTATGTTTCTGTGCGACGTGAATAAGTG
GACACGAAGAATTTTCCGTGCCCGCTTTCTGACCAACGATGCCTTTCTTG
CtttgcttccttccaccttcgCGAATCCTTCTAATTCCACCCCTCCGCAA
TCGTGGCAAAGGCAAAACAGGGCGATGATGTCGGCCGTATCGCGATGCAA
GGGATTTTATCTACTGTTGAGCCTTGCTATACTATGTAATTTATCACACG
GGGCTTTGCCCAAGCTACCAGGCACTGCCCTCGTTCAACGCTTCATCAAG
GGCAGACAAGCAGACCCCCGAGACCATGGCGCTGATATTGCTTCTTCAGA
AGAGGACTTTCACCAAGCCACTGCTCCGGTATTGGCAGAGGATATCGCTG
AGGCCATAAAGCCACCACGTCGCCGAAAACGCGACGTGGTGCGTTCCCGG
TTCGGTAAGATTCGCGCTGCAGTCTTCCCCATCGAAAACAAGGAATGCCA
AAAATTCTTTATGATGAGCGGTATGATGTTTTTCATCATCTACGTCTACA
CGGTGGTCCGCGATACCAAGGATACCTTGATCGTCTCCACTTGTGGGGCC
GAAGCCATCACCTTCCTCAAGGTCTACGGCGTACTgccggcctccgccct
cttcatGATCCTTtacgccaaggcctccaacGTCTTGGGGAAGAAGGCCC
TCTTCTATGCCACTTCggtcccttttttcctcttttatGCTGCCTTCTGC
ACCCTCATTTACCCCAATCGTGCCCATCTCATGCCTCACATCGACGCACA
AGCGGGAGGCCTCGGCTTCCTCGTCTCTCTGGTCAAAAACTGGGACTATT
CCCTCTTCTACATTGTCTCGGAGCTCTTTGGGAGCGTGGGCGTGTCGGTC
CTGTTTTGGCAGCTGGCGAACGAGATCATCAAGGTGCACGAGGCCAAGCG
CTTTTATCCGCTATTTGGGCAGCTCGCCAACATCGCCCCGATTGCCGCCG
GTCAAACAGTAGTGCTCTCGGCCCATATGACGGACCCTGCTAGCAAGGAT
CCTTTCTTGAAAAGCATCCAGCTTATCACCGTCTTTATCATGATAAGTGG
AGCGGCAATCATGTCTTTGTACCGAGGAATCACAGGTctggtggagcggg
aggacgcggcggccttggccgttGGGGGAGAAACCTCGGCAAGCACCACC
GCGGTGgcgagcaagaggaagaagaagcccaAGATGAGCTTGGCAGAGAG
CTTCAAGTTCCTGCTCACGAACAAATACCTTGGATGCATGGCTATTCTGG
TAGTGTCGTACGGTCTGGCGATCAACTTTACGGAGGTTATGTGGAAGAGT
CAAGTGAAGCTCCTATACAAGGACAAGCGCAAGTACCAGCAATTCATGGG
TAACTACTCGACCATGATGGGGGCTACCACCTTCATCGTCATTTTTTTCG
GGTCACAGATCGTGAAACGCTTTGGCATGAAGGTGGGGGCCCTGACCACG
CCCGCCATGCTGGGTCTCCTGGCGGCGCCCTTCTTTGGGTACATCGTCTT
CGGGGGAATATCCAGTACAGGGGCTTCTTCACCCAAGGCCTTGCAGACGG
CTGTGTGGGTGGGTCTAGTGCAAAACATTCTCTCCAAATCGATCAAATAT
GCCCTGTTTGACCCGACGAAGGAAATGGCGTACATTCCTCTCGGTCAAGA
GGAGAAAAccaagggcaaggcggccaTTGACGTATTGGCAGCCCGCATCG
GAAAGAGCGGAGGGGCTCTCTTGCAGCAGGCCATTGTGCTCTTCTTTGGT
AATATCATCGATGGGGCTCCAGTGGTGGTGGGTCTCTTCTATATTGTCAT
CTTTGCCTGGCTGTTTGCGGCAAACAGCCTCGGAAATCAGTTCGAGGAAG
TATCGAAGAACAAGTGAATGAGTAAATTGTGGACATTCACTATGTTTCTG
TGCGACGTGAATAAGTGGACACGAAGAATTTTCCGTGCCCGCTTTCTGAC
CAACGATGCCTTTCTTGCtttgcttccttccaccttcgCGAATCCTTCTA
ATTCCACCCCTCCGCAATCGTGGCAAAGGCAAAACAGGGCGATGATGTCG
GCCGTATCGCGATGCAAGGGATTTTATCTACTGTTGAGCCTTGCTATACT
ATGTAATTTATCACACGGGGCTTTGCCCAAGCTACCAGGCACTGCCCTCG
TTCAACGCTTCATCAAGGGCAGACAAGCAGACCCCCGAGACCATGGCGCT
GATATTGCTTCTTCAGAAGAGGACTTTCACCAAGCCACTGCTCCGGTATT
GGCAGAGGATATCGCTGAGGCCATAAAGCCACCACGTCGCCGAAAACGCG
ACGTGGTGCGTTCCCGGTTCGGTAAGATTCGCGCTGCAGTCTTCCCCATC
GAAAACAAGGAATGCCAAAAATTCTTTATGATGAGCGGTATGATGTTTTT
CATCATCTACGTCTACACGGTGGTCCGCGATACCAAGGATACCTTGATCG
TCTCCACTTGTGGGGCCGAAGCCATCACCTTCCTCAAGGTCTACGGCGTA
CTgccggcctccgccctcttcatGATCCTTtacgccaaggcctccaacGT
CTTGGGGAAGAAGGCCCTCTTCTATGCCACTTCggtcccttttttcctct
tttatGCTGCCTTCTGCACCCTCATTTACCCCAATCGTGCCCATCTCATG
CCTCACATCGACGCACAAGCGGGAGGCCTCGGCTTCCTCGTCTCTCTGGT
CAAAAACTGGGACTATTCCCTCTTCTACATTGTCTCGGAGCTCTTTGGGA
GCGTGGGCGTGTCGGTCCTGTTTTGGCAGCTGGCGAACGAGATCATCAAG
GTGCACGAGGCCAAGCGCTTTTATCCGCTATTTGGGCAGCTCGCCAACAT
CGCCCCGATTGCCGCCGGTCAAACAGTAGTGCTCTCGGCCCATATGACGG
ACCCTGCTAGCAAGGATCCTTTCTTGAAAAGCATCCAGCTTATCACCGTC
TTTATCATGATAAGTGGAGCGGCAATCATGTCTTTGTACCGAGGAATCAC
AGGTctggtggagcgggaggacgcggcggccttggccgttGGGGGAGAAA
CCTCGGCAAGCACCACCGCGGTGgcgagcaagaggaagaagaagcccaAG
ATGAGCTTGGCAGAGAGCTTCAAGTTCCTGCTCACGAACAAATACCTTGG
ATGCATGGCTATTCTGGTAGTGTCGTACGGTCTGGCGATCAACTTTACGG
AGGTTATGTGGAAGAGTCAAGTGAAGCTCCTATACAAGGACAAGCGCAAG
TACCAGCAATTCATGGGTAACTACTCGACCATGATGGGGGCTACCACCTT
CATCGTCATTTTTTTCGGGTCACAGATCGTGAAACGCTTTGGCATGAAGG
TGGGGGCCCTGACCACGCCCGCCATGCTGGGTCTCCTGGCGGCGCCCTTC
TTTGGGTACATCGTCTTCGGGGGAATATCCAGTACAGGGGCTTCTTCACC
CAAGGCCTTGCAGACGGCTGTGTGGGTGGGTCTAGTGCAAAACATTCTCT
CCAAATCGATCAAATATGCCCTGTTTGACCCGACGAAGGAAATGGCGTAC
ATTCCTCTCGGTCAAGAGGAGAAAAccaagggcaaggcggccaTTGACGT
ATTGGCAGCCCGCATCGGAAAGAGCGGAGGGGCTCTCTTGCAGCAGGCCA
TTGTGCTCTTCTTTGGTAATATCATCGATGGGGCTCCAGTGGTGGTGGGT
CTCTTCTATATTGTCATCTTTGCCTGGCTGTTTGCGGCAAACAGCCTCGG
AAATCAGTTCGAGGAAGTATCGAAGAACAAGTGAATGAGTAAATTGTGGA
CATTCACTATGTTTCTGTGCGACGTGAATAAGTGGACACGAAGAATTTTC
CGTGCCCGCTTTCTGACCAACGATGCCTTTCTTGCtttgcttccttccac
cttcgCGAATCCTTCTAATTCCACCCCTCCGCAATCGTGGCAAAGGCAAA
ACAGGGCGATGATGTCGGCCGTATCGCGATGCAAGGGATTTTATCTACTG
TTGAGCCTTGCTATACTATGTAATTTATCACACGGGGCTTTGCCCAAGCT
ACCAGGCACTGCCCTCGTTCAACGCTTCATCAAGGGCAGACAAGCAGACC
CCCGAGACCATGGCGCTGATATTGCTTCTTCAGAAGAGGACTTTCACCAA
GCCACTGCTCCGGTATTGGCAGAGGATATCGCTGAGGCCATAAAGCCACC
ACGTCGCCGAAAACGCGACGTGGTGCGTTCCCGGTTCGGTAAGATTCGCG
CTGCAGTCTTCCCCATCGAAAACAAGGAATGCCAAAAATTCTTTATGATG
AGCGGTATGATGTTTTTCATCATCTACGTCTACACGGTGGTCCGCGATAC
CAAGGATACCTTGATCGTCTCCACTTGTGGGGCCGAAGCCATCACCTTCC
TCAAGGTCTACGGCGTACTgccggcctccgccctcttcatGATCCTTtac
gccaaggcctccaacGTCTTGGGGAAGAAGGCCCTCTTCTATGCCACTTC
ggtcccttttttcctcttttatGCTGCCTTCTGCACCCTCATTTACCCCA
ATCGTGCCCATCTCATGCCTCACATCGACGCACAAGCGGGAGGCCTCGGC
TTCCTCGTCTCTCTGGTCAAAAACTGGGACTATTCCCTCTTCTACATTGT
CTCGGAGCTCTTTGGGAGCGTGGGCGTGTCGGTCCTGTTTTGGCAGCTGG
CGAACGAGATCATCAAGGTGCACGAGGCCAAGCGCTTTTATCCGCTATTT
GGGCAGCTCGCCAACATCGCCCCGATTGCCGCCGGTCAAACAGTAGTGCT
CTCGGCCCATATGACGGACCCTGCTAGCAAGGATCCTTTCTTGAAAAGCA
TCCAGCTTATCACCGTCTTTATCATGATAAGTGGAGCGGCAATCATGTCT
TTGTACCGAGGAATCACAGGTctggtggagcgggaggacgcggcggcctt
ggccgttGGGGGAGAAACCTCGGCAAGCACCACCGCGGTGgcgagcaaga
ggaagaagaagcccaAGATGAGCTTGGCAGAGAGCTTCAAGTTCCTGCTC
ACGAACAAATACCTTGGATGCATGGCTATTCTGGTAGTGTCGTACGGTCT
GGCGATCAACTTTACGGAGGTTATGTGGAAGAGTCAAGTGAAGCTCCTAT
ACAAGGACAAGCGCAAGTACCAGCAATTCATGGGTAACTACTCGACCATG
ATGGGGGCTACCACCTTCATCGTCATTTTTTTCGGGTCACAGATCGTGAA
ACGCTTTGGCATGAAGGTGGGGGCCCTGACCACGCCCGCCATGCTGGGTC
TCCTGGCGGCGCCCTTCTTTGGGTACATCGTCTTCGGGGGAATATCCAGT
ACAGGGGCTTCTTCACCCAAGGCCTTGCAGACGGCTGTGTGGGTGGGTCT
AGTGCAAAACATTCTCTCCAAATCGATCAAATATGCCCTGTTTGACCCGA
CGAAGGAAATGGCGTACATTCCTCTCGGTCAAGAGGAGAAAAccaagggc
aaggcggccaTTGACGTATTGGCAGCCCGCATCGGAAAGAGCGGAGGGGC
TCTCTTGCAGCAGGCCATTGTGCTCTTCTTTGGTAATATCATCGATGGGG
CTCCAGTGGTGGTGGGTCTCTTCTATATTGTCATCTTTGCCTGGCTGTTT
GCGGCAAACAGCCTCGGAAATCAGTTCGAGGAAGTATCGAAGAACAAGTG
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