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Properties
| Property Name | Value |
|---|
| Product | Cytochrome b5, heme-binding site |
| Orig transcript id | gnl|cribi|Naga_100042g12.5659.mrna |
| Orig protein id | gnl|cribi|Naga_100042g12.5659 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:226152..229226 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1279 ID=rna1279|Name=rna1279|organism=Nannochloropsis gaditana|type=mRNA|length=1767bp
CCATCACTAGTAGGAACTCGCGTTGTCATGGGGGATGACGAGGTATCCAC
AGTCAAAACAGCAGCTCAATGGAAAGACGAAGGCAATGAACTCTATAAAA
AGGGGGATTATCGTGCTGCCATCGATGCATACAGTCTTGCTATCGCAATG
TCACCTGACGAAGCGTCTTTTTACGGCAATCGGGCAGCGGCGCACATGAT
GATATTGGCATATGAAGCTGCTATTGACGACTGCAACAAAGCCTTGGCAT
TGAGCCCAAATATGGTCAAAGCCTATTTTAGGAAAGGAAAAGCTCTGGCA
ACGCTAGGCAAATTCGACGAGGCAATGACCGCCTACCATCAAGGGCTGCA
ACAGGACCCGAACAACGCGCAGGGGCACGCTGAAAAAGCCGAGGTGGAGG
CTGTCATGAAAGCGGGCGCCAAGGCTACCGAGCTCCTGCAGGAAACCCGA
GGACCTGGCAGCTCCACCCTCCAAAACGGCCAGAATGGTGGAGCGGTCCA
CAAGCGTAACTTTGTTCGGGCGAACGCCTTGGTGGATCAATGTTTGAGCC
TGGCCTCTGCCTCCCCGCAGGTCCGTCTCCTCAAATTGGAGTGCCAAGTA
GGTCTTGGCCAGTACGAGGAAGCCTTCGCGGGCAGTAACCACCTCCTTCG
CCTGTCGCCCTCCCTCGCCCCCTTGCTGTACCTGCGGGCGGTGTGCCTCT
ACCATCTGGGCAATTTCGAGGGCGCCCTCAAACATCTGCAGCAGGCGGTG
CGGTCCGACCCCGACAACCACGCCTACGTATCGCTCTTGAAAAAAGTCCG
GGCCTTGGACGCGAAAAAGAAAGAGGGGGACACCTGCTTCACCCAAGGCC
AGTACCAGCCGGCCATCGACGCCTGGACGGAGGCCTTGGCGGTGGACCCT
AGCCAGAAAGCAGTGAATGCCAAAATGTTCAACAACCGGGCGACGGCCTA
CGCGAAGATGAGGAAGCACACGGAAGCGGTGGCGGACTGCAAACGGGCCT
TGGCCCTGGACCCTCAGTATTTGAAAGCCCTGAAACGAAAGGCGGAGTCC
TTGTATGCCCTGGGGGGGGAGGAGAACCTGGAGCAGTGCCTAAGAGACTA
CGAGGCTGCGGCACGTTTGGCCCCCGCGTCGGAGGAGCGGGAATACGCCC
GGAAAATGCACCAGGTGAAAGTAGCCTTAAAGCGAGCAAAACGCAAGGAC
TTGTATAGGATCCTGGGCCTGAGCACGGATGCGACCGAGGACGAGATCCG
CAAGGCGTACCGAAAATTGGCGTTGAAACACCATCCAGACCGGCACACGA
ACAGCAGCGAAGAGGCCAAGGCGGCGGCCGAGAAAGCGTTCAAGGACGTG
GCGGAGGCCTACGAGGTGTTGAGCGACAAGGAGAAGAGGTCGCGGTACGA
CAGTGGGACGGACGTGGAGGATTTGGACAACCCGCAGGCCCAGGCCGGGT
CGCACGCCGGCGGCTTCGGGGGGTTTGGGGGCCGAGGGGGGATCGACCCT
AACGTGCTCTTTCAAATGTTCATGCAGCAGCAGGCGATGGGGGGAGGGAG
AGGGGGGGGAGGGCGAGGAGGTTTTCATTTCTAGGAGCGAGAAAAGGCCT
CGGGGTTTCCGCCACTGGGAATGGAGGTGGGGGTGGGGACTGTAGGAGAG
ACACGACCACTGGAAAGCGACATTAAACGACTTCTCTCACTCAACGCTTC
CGTGCGAGCAGCGAAGGCACTTTCACAGTGTGCTGTTCATTCTTGATTTT
AACGCGTGACCACTCGC back to topprotein sequence of rna1279 >rna1279-protein ID=rna1279-protein|Name=rna1279|organism=Nannochloropsis gaditana|type=polypeptide|length=521bp
MEHYPPHIATSYITPIHAYPARSTSSVMAPRDEETVMSPGGDPTVKDPLA
EAVSQMPPPNSIKKNELWYIHGRAYDLTDFINKHPGGPTVLLNTQGRDCT
ALFEAFHPFTDRPAKLLAKMKEVKVSPDILAEKCTDISQGNWFYLPDGTP
DPFWAALKERCGKYMKENKVERTMKWSTLLLHVFLLMIQPPLWWFGYLDA
YPWYSHAAAVAMGVTTWIAGRLGHDGGHFAISHHYWINRFFGNWAGLGLS
NMSYWEILHNVDHHTDTNTEKDPDLYHYVYFLRDHPRYPWYIFHRLQVAR
IYCYAVWSFTTAGLLMIEPMNMLLTGSGTRPPTVRLAKFRFFFWAKLVFH
MLLFPTVMLGIPIWLLWDSNPNKGVVIAVRFASFVIYCAVTGVLFGLFSQ
VNHFSEDCVAAASRNTSWAVRQVETAANFCVDSSFWSLITAGIHIQIEHH
LFPGLSSDRVLPLVPIVEQTCKEFGVNYKNFKTFPSILSSVHAYIDTLAY
RVPRPAAKPKNAESTAVEVAE back to topmRNA from alignment at CM002457.1:226152..229226+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1279 ID=rna1279|Name=rna1279|organism=Nannochloropsis gaditana|type=mRNA|length=3075bp|location=Sequence derived from alignment at CM002457.1:226152..229226+ (Nannochloropsis gaditana)
GTGTGAATAAAACAGCTCTTCCCAGATCCTTGTTGGTTACATGCTGTGTG
CTCGCCTTGGCGTGCTAATATTTTTTTGTGCCTTGAAGACAACCAATCCC
TGAAGGAACAAAGGAGACTTTGCTCGGGATCAGAACAATTTTCGTGTAGG
TATCCGCAGAAATGAAACGATCGGCATCATTCATAGAGTTGGAGTTGTAG
ACATAACATCTGACGCAGACAGATGAGAGGGATCCTTTTTTGTCCATGGG
CTGTACTCACGTCTTATGGAGCATTATCCTCCTCACATTGCTACTTCCTA
TATCACACCCATCCACGCATATCCAGCGAGGTCTACTTCCTCAGTAATGG
CACCACGCGATGAAGAAACTGTTATGAGCCCAGGAGGCGATCCTACCGTG
AAGGACCCCCTTGCGGAAGCCGTGAGTCAGATGCCACCGCCCAATTCTAT
CAAGAAGAACGAGCTATGGTACATCCACGGGCGAGCTTATGACCTTACTG
ATTTCATCAACAAACATCCTGGTAAGCTGCATGTAAGATCAGAGCATTTG
TAGGCTTTTTAGTCCTTCCAGATCTACGCACGTAAAGAGAGATTAGAAGG
GAAAGCACCATGTGGTGAAAAAAGGTTGGACGTTGATATGTCTCGCTACC
TTCATCCTGTGGCTTGCCAACACTTTTATGGCAGCGTTGATGATCGTATC
ATAATGACTGATAAGGGCTTTTTAAACGCGCGCCCAAATATCTCTTCGTA
CCTTCACCTCTCTATCGTGTTTCGATGAGCTTCCTCTGTGCTGCTGACCT
ACCAAGATGCAGCTCATTTTTCTCGTGATACATTTCCCACTTTTCATTTA
TTACGTCTTTTTGCTTGACCCTCGATTTCCCCCTACTCCACGCCCTCGCA
GGAGGTCCCACCGTACTTCTCAACACTCAAGGACGGGACTGCACAGCGCT
TTTCGAGGCTTTCCATCCGTTCACGGACCGGCCTGCAAAGCTCTTAGCCA
AGATGAAAGAGGTAttgacggaggaaaggggttCAACACGGCAATCGAGC
TTAAATGTGTCTGGCTCTTGATCCGTGTCGTGATGTCATTTCCATTCCTG
GTGTCCTGATCACGTTCTCatgtctccctttccttgcgAAAACACCCTCT
GGCATGCTCTAGGTCAAGGTATCGCCCGACATTTTGGCAGAGAAATGCAC
GGACATTTCTCAGGGCAACTGGTTCTACTTGCCGGACGGTACGCCGGATC
CTTTCTGGGCGGCCTTGAAAGAGCGATGCGGGAAGTACATGAAAGAGAAC
AAGGTGGAACGCACCATGAAGTggtccaccctccttctgcaCGTCTTTCT
GCTCATGAtccagcctcccctctgGTGGTTTGGGTACCTTGATGCCTATC
CTTGGTATTCGCACGCCGCGGCGGTGGCCATGGGCGTCACCACGTGGATT
GCCGGCCGCCTGGGTCATGACGGGGGCCACTTCGCCATCTCGCACCACTA
CTGGATCAACCGCTTCTTTGGAAATTGGGCGGGGCTGGGGCTGAGTAACA
TGTCGTACTGGGAGATTCTCCACAACGTGGACCATCACACGGACACGAAC
ACGGAGAAAGACCCGGACTTGTATCACTACGTCTACTTCCTCCGCGACCA
CCCCCGCTACCCGTGGTACATATTCCACCGTCTGCAGGTGGCGAGGATAT
ATTGCTACGCCGTCTGGAGCTTTACCACGGCCGGGTTGCTGATGATCGAG
CCGATGAATATGCTCTTGACCGGCTCGGGgacccgcccgcccaccGTGCG
ACTGGCTAAATTTCGCTTCTTTTTCTGGGCTAAACTGGTGTTTCACATGC
TGCTCTTTCCGACCGTGATGCTGGGCATCCCCATTTGGTTGCTTTGGGAC
AGCAACCCGAACAAGGGCGTGGTCATTGCCGTGCGTTTCGCCTCCTTTGT
CATTTATTGCGCCGTCACGGGCGTGCTTTTCGGACTCTTTTCCCAAGTGA
ACCATTTCTCAGAGGATTGTGTGGCAGCAGCCTCCCGCAATACCTCCTGG
GCGGTCCGCCAGGTGGAGACTGCGGCAAACTTTTGCGTGGATTCCTCCTT
TTGGTCCCTCATCACGGCGGGGATCCACATCCAGATCGAGCACCACTTGT
TCCCTGGTCTGTCTTCTGACCGGGTCCTCCCTCTGGTTCCCATCGTCGAG
CAGACCTGCAAGGAATTTGGGGTCAATTACAAGAACTTCAAGACGTTCCC
TTCCATTCTCAGTTCTGTGCACGCCTACATTGATACCTTGGCATACCGTG
TCCCACGGCCCGCTGCGAAGCCAAAGAACGCGGAGAGCACCGCGGTGGAA
GTGGCGGAATAGGCAAAATGCCGCAGGAAGAGAGCTGAGCACGAGATTGG
AGCAATGAAAATGCTTTATGTTCATAATCAAGGGTGGTGCccaaaagaga
ggaggaaaaactgAAGAGCGGTGCACACAATTGGGATGCTGTCACGGGAA
CTAAGATCAGATAGAGAAAGTGTAAGATGTCAGGAATCTTATTCTGACCA
GGAGAGGGCGTGCAAATACATGAAAGGGTTGTTCACGGGGAtcaggaagg
caaagagtgAGGAGCAGACGCTGTGAAACCGAGCTCTAAAAGCAATgtcg
ctttccttccttctacCCCCACTTCATTCTCCACGGGTCAAAGTGTGTAA
GGCAAAAGATTAAAGACCGCTATGAAAATGAATTGGTGGTCAGAGAGGAG
CATCAGCATGTGTAGAAATCCATGTGAAAAGACAAGGCAGATGGCGAGTG
AGAGGGGTCTCACTCGTACGCATGCATATGACCGGCATCAACACGATTGT
AGAAATGCGTGCCACTAATTTTGTTTCCAATCTGAAATTGGGATCGCCCG
GATCCAGaagtggagaaggaatgAAATCCGAGACTTTGAACAATCGACTG
AGAATCGTCGCTTTGCATCGTCAAACCTCCGATAGGTCTTCCATTCGATC
TTATCATTTTCGAAGGGCTTGCTTGCACATATGTTGCATTCGCCTCTTAA
TATTgttgcccctcctcggctTTTC back to topCoding sequence (CDS) from alignment at CM002457.1:226152..229226+ >rna1279 ID=rna1279|Name=rna1279|organism=Nannochloropsis gaditana|type=CDS|length=4698bp|location=Sequence derived from alignment at CM002457.1:226152..229226+ (Nannochloropsis gaditana)
ATGGAGCATTATCCTCCTCACATTGCTACTTCCTATATCACACCCATCCA
CGCATATCCAGCGAGGTCTACTTCCTCAGTAATGGCACCACGCGATGAAG
AAACTGTTATGAGCCCAGGAGGCGATCCTACCGTGAAGGACCCCCTTGCG
GAAGCCGTGAGTCAGATGCCACCGCCCAATTCTATCAAGAAGAACGAGCT
ATGGTACATCCACGGGCGAGCTTATGACCTTACTGATTTCATCAACAAAC
ATCCTGGAGGTCCCACCGTACTTCTCAACACTCAAGGACGGGACTGCACA
GCGCTTTTCGAGGCTTTCCATCCGTTCACGGACCGGCCTGCAAAGCTCTT
AGCCAAGATGAAAGAGGTCAAGGTATCGCCCGACATTTTGGCAGAGAAAT
GCACGGACATTTCTCAGGGCAACTGGTTCTACTTGCCGGACGGTACGCCG
GATCCTTTCTGGGCGGCCTTGAAAGAGCGATGCGGGAAGTACATGAAAGA
GAACAAGGTGGAACGCACCATGAAGTggtccaccctccttctgcaCGTCT
TTCTGCTCATGAtccagcctcccctctgGTGGTTTGGGTACCTTGATGCC
TATCCTTGGTATTCGCACGCCGCGGCGGTGGCCATGGGCGTCACCACGTG
GATTGCCGGCCGCCTGGGTCATGACGGGGGCCACTTCGCCATCTCGCACC
ACTACTGGATCAACCGCTTCTTTGGAAATTGGGCGGGGCTGGGGCTGAGT
AACATGTCGTACTGGGAGATTCTCCACAACGTGGACCATCACACGGACAC
GAACACGGAGAAAGACCCGGACTTGTATCACTACGTCTACTTCCTCCGCG
ACCACCCCCGCTACCCGTGGTACATATTCCACCGTCTGCAGGTGGCGAGG
ATATATTGCTACGCCGTCTGGAGCTTTACCACGGCCGGGTTGCTGATGAT
CGAGCCGATGAATATGCTCTTGACCGGCTCGGGgacccgcccgcccaccG
TGCGACTGGCTAAATTTCGCTTCTTTTTCTGGGCTAAACTGGTGTTTCAC
ATGCTGCTCTTTCCGACCGTGATGCTGGGCATCCCCATTTGGTTGCTTTG
GGACAGCAACCCGAACAAGGGCGTGGTCATTGCCGTGCGTTTCGCCTCCT
TTGTCATTTATTGCGCCGTCACGGGCGTGCTTTTCGGACTCTTTTCCCAA
GTGAACCATTTCTCAGAGGATTGTGTGGCAGCAGCCTCCCGCAATACCTC
CTGGGCGGTCCGCCAGGTGGAGACTGCGGCAAACTTTTGCGTGGATTCCT
CCTTTTGGTCCCTCATCACGGCGGGGATCCACATCCAGATCGAGCACCAC
TTGTTCCCTGGTCTGTCTTCTGACCGGGTCCTCCCTCTGGTTCCCATCGT
CGAGCAGACCTGCAAGGAATTTGGGGTCAATTACAAGAACTTCAAGACGT
TCCCTTCCATTCTCAGTTCTGTGCACGCCTACATTGATACCTTGGCATAC
CGTGTCCCACGGCCCGCTGCGAAGCCAAAGAACGCGGAGAGCACCGCGGT
GGAAGTGGCGGAATAGATGGAGCATTATCCTCCTCACATTGCTACTTCCT
ATATCACACCCATCCACGCATATCCAGCGAGGTCTACTTCCTCAGTAATG
GCACCACGCGATGAAGAAACTGTTATGAGCCCAGGAGGCGATCCTACCGT
GAAGGACCCCCTTGCGGAAGCCGTGAGTCAGATGCCACCGCCCAATTCTA
TCAAGAAGAACGAGCTATGGTACATCCACGGGCGAGCTTATGACCTTACT
GATTTCATCAACAAACATCCTGGAGGTCCCACCGTACTTCTCAACACTCA
AGGACGGGACTGCACAGCGCTTTTCGAGGCTTTCCATCCGTTCACGGACC
GGCCTGCAAAGCTCTTAGCCAAGATGAAAGAGGTCAAGGTATCGCCCGAC
ATTTTGGCAGAGAAATGCACGGACATTTCTCAGGGCAACTGGTTCTACTT
GCCGGACGGTACGCCGGATCCTTTCTGGGCGGCCTTGAAAGAGCGATGCG
GGAAGTACATGAAAGAGAACAAGGTGGAACGCACCATGAAGTggtccacc
ctccttctgcaCGTCTTTCTGCTCATGAtccagcctcccctctgGTGGTT
TGGGTACCTTGATGCCTATCCTTGGTATTCGCACGCCGCGGCGGTGGCCA
TGGGCGTCACCACGTGGATTGCCGGCCGCCTGGGTCATGACGGGGGCCAC
TTCGCCATCTCGCACCACTACTGGATCAACCGCTTCTTTGGAAATTGGGC
GGGGCTGGGGCTGAGTAACATGTCGTACTGGGAGATTCTCCACAACGTGG
ACCATCACACGGACACGAACACGGAGAAAGACCCGGACTTGTATCACTAC
GTCTACTTCCTCCGCGACCACCCCCGCTACCCGTGGTACATATTCCACCG
TCTGCAGGTGGCGAGGATATATTGCTACGCCGTCTGGAGCTTTACCACGG
CCGGGTTGCTGATGATCGAGCCGATGAATATGCTCTTGACCGGCTCGGGg
acccgcccgcccaccGTGCGACTGGCTAAATTTCGCTTCTTTTTCTGGGC
TAAACTGGTGTTTCACATGCTGCTCTTTCCGACCGTGATGCTGGGCATCC
CCATTTGGTTGCTTTGGGACAGCAACCCGAACAAGGGCGTGGTCATTGCC
GTGCGTTTCGCCTCCTTTGTCATTTATTGCGCCGTCACGGGCGTGCTTTT
CGGACTCTTTTCCCAAGTGAACCATTTCTCAGAGGATTGTGTGGCAGCAG
CCTCCCGCAATACCTCCTGGGCGGTCCGCCAGGTGGAGACTGCGGCAAAC
TTTTGCGTGGATTCCTCCTTTTGGTCCCTCATCACGGCGGGGATCCACAT
CCAGATCGAGCACCACTTGTTCCCTGGTCTGTCTTCTGACCGGGTCCTCC
CTCTGGTTCCCATCGTCGAGCAGACCTGCAAGGAATTTGGGGTCAATTAC
AAGAACTTCAAGACGTTCCCTTCCATTCTCAGTTCTGTGCACGCCTACAT
TGATACCTTGGCATACCGTGTCCCACGGCCCGCTGCGAAGCCAAAGAACG
CGGAGAGCACCGCGGTGGAAGTGGCGGAATAGATGGAGCATTATCCTCCT
CACATTGCTACTTCCTATATCACACCCATCCACGCATATCCAGCGAGGTC
TACTTCCTCAGTAATGGCACCACGCGATGAAGAAACTGTTATGAGCCCAG
GAGGCGATCCTACCGTGAAGGACCCCCTTGCGGAAGCCGTGAGTCAGATG
CCACCGCCCAATTCTATCAAGAAGAACGAGCTATGGTACATCCACGGGCG
AGCTTATGACCTTACTGATTTCATCAACAAACATCCTGGAGGTCCCACCG
TACTTCTCAACACTCAAGGACGGGACTGCACAGCGCTTTTCGAGGCTTTC
CATCCGTTCACGGACCGGCCTGCAAAGCTCTTAGCCAAGATGAAAGAGGT
CAAGGTATCGCCCGACATTTTGGCAGAGAAATGCACGGACATTTCTCAGG
GCAACTGGTTCTACTTGCCGGACGGTACGCCGGATCCTTTCTGGGCGGCC
TTGAAAGAGCGATGCGGGAAGTACATGAAAGAGAACAAGGTGGAACGCAC
CATGAAGTggtccaccctccttctgcaCGTCTTTCTGCTCATGAtccagc
ctcccctctgGTGGTTTGGGTACCTTGATGCCTATCCTTGGTATTCGCAC
GCCGCGGCGGTGGCCATGGGCGTCACCACGTGGATTGCCGGCCGCCTGGG
TCATGACGGGGGCCACTTCGCCATCTCGCACCACTACTGGATCAACCGCT
TCTTTGGAAATTGGGCGGGGCTGGGGCTGAGTAACATGTCGTACTGGGAG
ATTCTCCACAACGTGGACCATCACACGGACACGAACACGGAGAAAGACCC
GGACTTGTATCACTACGTCTACTTCCTCCGCGACCACCCCCGCTACCCGT
GGTACATATTCCACCGTCTGCAGGTGGCGAGGATATATTGCTACGCCGTC
TGGAGCTTTACCACGGCCGGGTTGCTGATGATCGAGCCGATGAATATGCT
CTTGACCGGCTCGGGgacccgcccgcccaccGTGCGACTGGCTAAATTTC
GCTTCTTTTTCTGGGCTAAACTGGTGTTTCACATGCTGCTCTTTCCGACC
GTGATGCTGGGCATCCCCATTTGGTTGCTTTGGGACAGCAACCCGAACAA
GGGCGTGGTCATTGCCGTGCGTTTCGCCTCCTTTGTCATTTATTGCGCCG
TCACGGGCGTGCTTTTCGGACTCTTTTCCCAAGTGAACCATTTCTCAGAG
GATTGTGTGGCAGCAGCCTCCCGCAATACCTCCTGGGCGGTCCGCCAGGT
GGAGACTGCGGCAAACTTTTGCGTGGATTCCTCCTTTTGGTCCCTCATCA
CGGCGGGGATCCACATCCAGATCGAGCACCACTTGTTCCCTGGTCTGTCT
TCTGACCGGGTCCTCCCTCTGGTTCCCATCGTCGAGCAGACCTGCAAGGA
ATTTGGGGTCAATTACAAGAACTTCAAGACGTTCCCTTCCATTCTCAGTT
CTGTGCACGCCTACATTGATACCTTGGCATACCGTGTCCCACGGCCCGCT
GCGAAGCCAAAGAACGCGGAGAGCACCGCGGTGGAAGTGGCGGAATAG back to top
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