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Properties
| Property Name | Value |
|---|
| Product | Peptidase M22, O-sialoglycoprotein peptidase |
| Orig transcript id | gnl|cribi|Naga_100042g17.5662.mrna |
| Orig protein id | gnl|cribi|Naga_100042g17.5662 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:208994..211780 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1274 ID=rna1274|Name=rna1274|organism=Nannochloropsis gaditana|type=mRNA|length=1088bp
GTGCAACGAGAAGGGGAAACGAGCTTTATCTTTACTACGTCAGCATTTTA
TGCCATTTGCTTCCATAAATGTGATAGTAAAGAGCTCGTTGTTATTTTTC
CAAAGCCATGTACATTTATTAGCACTGCTTTTGTGGGAAGGGTTGAATGC
GAGGGTAGCTGCGCTCGTCACAACAGCCAAGGCTCTTACTGACTACGAGA
TGGATTGTGCCGATTGAAACTTGTGCACAAGTACACGCTTCTTCGTGGTG
GATGATACATTATATGCGAATCTGCAGGGTTGCAAGTAGATTAAGGAAGA
ACGTGTGATAATCATAACCTTCCTATTTTTTTTAATGCTTTTAAAATGTT
GTCAAAGAGCAAGTTGAAGGTAATCAACCCCGGACACCCCATCAACTGAT
CAAACCACGATCAACCACGCACACACAGTGTGTTGAACGCTACACAGTTA
ATGAACACCGTGCAAAGTGTCAATGCCGGGTGGGCGGCTTTCGCCTTTGC
AACATTAAGTGGGGCCTATATGGGATGGCGACGGTTCTTGAAGGAAGATG
CTGAGCGGAAAGTGGAGTGGGAGCGTATCCAGGTTCTCGAAAACGAAAAG
CTTCGAAGGGAGGCCGAAGCCCTTGCAAAACTGGCGTCAGAACGAAAAGC
AGCACGGCAACGGGAGCAAAGTGCCAAGCCAATAAAAAGCCGGCCTTCAC
GAAAGCCTTTATCAGAAACCGTGGGTATTTCCGCATCGAGTACTCCAGCA
CCAGCTGCCCCTGTCCCCCTTTCCACGTCTCTCCGGCACCGGATCACGGC
GAAGATCCTCCAAAGTGAGGAGGAGGAGGTTCATGGGGCAGAGGATGATA
TGACAACCGCGCGCAACCCGTCTTTCCATGCGAAACTGGTCGAAAATGAT
GCCAGTGGCTGGGGAGAGGCCAGAGTTGTCACGATCACGGAGCAACCGCC
AGCTGCATTTATTGTAAATCAAGGTACAGGGGGAAGCGATAAAATCGAAC
CATAAAAATGAAAGGAAGCGCTCGCCGCGGCCAATAACAAAAGCAAGACA
TGACATGCACCAGATTCTTCTTTGTTGGTGAACGTTGC back to topprotein sequence of rna1274 >rna1274-protein ID=rna1274-protein|Name=rna1274|organism=Nannochloropsis gaditana|type=polypeptide|length=557bp
MLILTVRWKKALKAVYVIMLSRISAFQLARPGLGWMEASTKRISWSLTRK
AFFPTTPTAAKAGMDPATHSAVNPDGQTSTGTSQAPASATSSTRRRRRPA
GSGASKASRDFVGMAKGTDTGQYPSFSADNFVQAASGLPTTSPEDPVFTV
LGIETSCDDTGVAVVRSDGVILGEALASQYKIHEQWGGVVPGLARDAHAS
VIDSMVEEALKKAGMASVAEVGAVGVTVGPGLEICLRVGTETAKALATTF
HKPFVAVHHLEAHCLMARFGQPLDSREPKEEAAGTSASSPIPPQTRFPFL
ALLVSGGHCMLLECWGVGRYRTLGGTLDDALGEAYDKAARLLKIGTGAAG
GPAMERLAREGNPKAVVLPVPMRGKKNLNFSYAGLKNAFRMAVTRLKEAL
NLGEEEDFDPKTKADLAASFQHVAIQHLEERLTLAMKESERRGVHTLAVV
GGVASNQAIRARLQVLCEKRSLARRLEKEQERIWDEANSENKGGGTMEVE
APLPPWELVVPPPRLCTDNGVMVAWAAIEKLRLGYSDVVEGRDVHARWPF
ASWQNST back to topmRNA from alignment at CM002457.1:208994..211780+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1274 ID=rna1274|Name=rna1274|organism=Nannochloropsis gaditana|type=mRNA|length=2787bp|location=Sequence derived from alignment at CM002457.1:208994..211780+ (Nannochloropsis gaditana)
GGGTTTGGACAGCTTTGAATTAGAAAACAACCGGGAGACAAGACGCACAA
AGGGTCACGTACCTTTGCACGGTGTTCATTAACTGTGTAGCGTTCAACAC
ACTGTGTGTGCGTGGTTGATCGTGGTTTGATCAGTTGATGGGGTGTCCGG
GGTTGATTACCTTCAACTTGCTCTTTGACAACATTTTAAAAGCATTAAAA
AAAATAGGAAGGTTATGATTATCACACGTTCTTCCTTAATCTACTTGCAA
CCCTGCAGATTCGCATATAATGTATCATCCACCACGAAGAAGCGTGTACT
TGTGCACAAGTTTCAATCGGCACAATCCATCTCGTAGTCAGTAAGAGCCT
TGGCTGTTGTGACGAGCGCAGCTACCCTCGCATTCAACCCTTCCCACAAA
AGCAGTGCTAATAAATGTACATGGCTTTGGAAAAATAACAACGAGCTCTT
TACTATCACATTTATGGAAGCAAATGGCATAAAATGCTGACGTAGTAAAG
ATAAAGCTCGTTTCCCCTTCTCGTTGCACTTGACTGAGAGGAAGCAACGG
CTTCGGCGTCCTCCAGACTTGCGATGATTTTACCCGGCTTACGTGTACTT
ATTTGTACTTCCTCTCATACGTATTTGTACACCTACATAGATCCTGAAGG
GTCTGCGTGGACGACTTGATTTCCCATCGGGGCAGTTTTACCACGGATCA
CGAAGGTTAACCTCTTGGTAGGTGGTGCTATAACCGTGCCCAGACGTACG
GGTTTCGCACTCTATCTATAGCAGCACAATATATTCTTCGGTGTAGATGC
TCATACTGACCGTTAGATGGAAAAAAGCCCTGAAGGCCGTCTATGTCATC
ATGTTATCGCGAATCTCAGCATTTCAGCTGGCACGGCCTGGGCTTGGCTG
GATGGAGGCAAGCACCAAGAGGATATCATGGTCACTGACCCGCAAAGCTT
TCTTTCCTACCACTCCTACGGCTGCCAAGGCGGGTATGGATCCCGCTACT
CATTCAGCTGTCAACCCTGACGGACAAACGTCTACAGGGACAAGCCAAGC
CCCTGCTTCCGCCACCTCTAGTACCCGCCGACGTCGACGCCCCGCTGGGT
CCGGGGCTTCCAAAGCCTCCCGAGACTTCGTGGGGATGGCCAAAGGCACC
GACACGGGACAATACCCATCCTTCTCCGCGGATAATTTTGTCCAAGCCGC
CTCGGGATTACCCACAACCAGTCCGGAAGATCCTGTATTCACGGTGCTTG
GGATCGAAACCAGTTGCGACGATACGGGCGTGGCTGTCGTCCGTTCCGAC
GGGGTCATCTTGGGGGAGGCACTGGCTTCGCAATACAAAATCCATGAGCA
ATGGGGCGGGGTGGTGCCAGGCCTGGCGCGGGATGCCCATGCCTCGGTCA
TCGACAGCATGGTCGAGGAAGCCTTAAAGAAGGCCGGGATGGCTTCTGTG
GCGGAGGTCGGTGCGGTCGGGGTAACGGTAGGACCGGGCCTGGAAATTTG
CCTGAGGGTTGGCACTGAGACCGCCAAAGCCTTGGCGACGACCTTCCACA
AACCTTTCGTGGCTGTACACCACTTGGAAGCGCATTGTCTGATGGCACGC
TTCGGGCAACCTCTCGATTCACGGGaaccgaaggaggaggctgccggGAC
CAGTGCATcgtcccccatccccccgcaaacccgcttcccttttctgGCCC
TCCTTGTGTCGGGAGGCCACTGCATGCTTCTGGAATGTTGGGGGGTGGGT
CGCTATCGCACCTTGGGCGGGACCCTTGATGACGCACTGGGCGAGGCCTA
CGACAAGGCAGCCCGCCTTTtgaagatcggaacgggcGCCGCGGGGGGTC
CGGCCATGGAAAGACTCGCCCGAGAAGGAAATCCCaaggcggtggtgctg
cCCGTCCCGATGCGGGGGAAGAAGAATTTGAATTTTTCCTACGCCGGGTT
AAAGAACGCGTTTCGGATGGCGGTGACACGCCTGAAAGAGGCGCTAAatc
tgggagaggaggaggacttcgaCCCCAAGACAAAAGCAGATTTGGCCGCT
TCGTTCCAGCACGTGGCGATCCAGCATTTGGAGGAGCGGTTGACCCTGGC
CATGAAGGAGAGTGAGCGCCGCGGGGTCCACACGTTGGCTGTGGTGGGTG
GGGTGGCATCCAATCAGGCGATCCGGGCCCGCCTGCAGGTTTTGTGTGAG
AAAAGAAGCTTGGCCAGGAGGCTGGAAAAGGAACAGGAAAGAATATGGGA
TGAGGCAAACAGCGAGAACAAAGGTGGTGGGACcatggaggtggaagccc
ccctcccgccctgggAGCTAGtagtgccccccccccggttgTGCACTGAC
AACGGTGTGATGGTAGCTTGGGCGGCGATAGAGAAGCTCCGATTGGGTTA
CTCGGATGtcgtggaagggcgggatgTGCATGCCCGTTGGCCCTTTGCTT
CTTGGCAGAACTCAACGTGACGAGTAGGGGCAAGGTAAAACATGAGGGGA
TAGCAATGCATaggcgggaggtgggaaTGTATCGATTCGCGCGCACCAAG
CATGGATTTGTAGAAATATCAATAAGACTCGTTGATAATACGTGAAGAAA
GCACACTCATGTACAACGACTAGTACCACATGATTTTCTCCTTGGTTGCG
GGGAAAGGCGATCGTTTCCTTATGTGTGGTGGAAGGCAATCACATGCCAG
TCCAGCAGAAGACATAAAAGATTAGAAAAAAACCTGTAAGACAGACCGGC
ATGGCCTGACGACAACCAAATATCAACCACACATTGT back to topCoding sequence (CDS) from alignment at CM002457.1:208994..211780+ >rna1274 ID=rna1274|Name=rna1274|organism=Nannochloropsis gaditana|type=CDS|length=1674bp|location=Sequence derived from alignment at CM002457.1:208994..211780+ (Nannochloropsis gaditana)
ATGCTCATACTGACCGTTAGATGGAAAAAAGCCCTGAAGGCCGTCTATGT
CATCATGTTATCGCGAATCTCAGCATTTCAGCTGGCACGGCCTGGGCTTG
GCTGGATGGAGGCAAGCACCAAGAGGATATCATGGTCACTGACCCGCAAA
GCTTTCTTTCCTACCACTCCTACGGCTGCCAAGGCGGGTATGGATCCCGC
TACTCATTCAGCTGTCAACCCTGACGGACAAACGTCTACAGGGACAAGCC
AAGCCCCTGCTTCCGCCACCTCTAGTACCCGCCGACGTCGACGCCCCGCT
GGGTCCGGGGCTTCCAAAGCCTCCCGAGACTTCGTGGGGATGGCCAAAGG
CACCGACACGGGACAATACCCATCCTTCTCCGCGGATAATTTTGTCCAAG
CCGCCTCGGGATTACCCACAACCAGTCCGGAAGATCCTGTATTCACGGTG
CTTGGGATCGAAACCAGTTGCGACGATACGGGCGTGGCTGTCGTCCGTTC
CGACGGGGTCATCTTGGGGGAGGCACTGGCTTCGCAATACAAAATCCATG
AGCAATGGGGCGGGGTGGTGCCAGGCCTGGCGCGGGATGCCCATGCCTCG
GTCATCGACAGCATGGTCGAGGAAGCCTTAAAGAAGGCCGGGATGGCTTC
TGTGGCGGAGGTCGGTGCGGTCGGGGTAACGGTAGGACCGGGCCTGGAAA
TTTGCCTGAGGGTTGGCACTGAGACCGCCAAAGCCTTGGCGACGACCTTC
CACAAACCTTTCGTGGCTGTACACCACTTGGAAGCGCATTGTCTGATGGC
ACGCTTCGGGCAACCTCTCGATTCACGGGaaccgaaggaggaggctgccg
gGACCAGTGCATcgtcccccatccccccgcaaacccgcttcccttttctg
GCCCTCCTTGTGTCGGGAGGCCACTGCATGCTTCTGGAATGTTGGGGGGT
GGGTCGCTATCGCACCTTGGGCGGGACCCTTGATGACGCACTGGGCGAGG
CCTACGACAAGGCAGCCCGCCTTTtgaagatcggaacgggcGCCGCGGGG
GGTCCGGCCATGGAAAGACTCGCCCGAGAAGGAAATCCCaaggcggtggt
gctgcCCGTCCCGATGCGGGGGAAGAAGAATTTGAATTTTTCCTACGCCG
GGTTAAAGAACGCGTTTCGGATGGCGGTGACACGCCTGAAAGAGGCGCTA
AatctgggagaggaggaggacttcgaCCCCAAGACAAAAGCAGATTTGGC
CGCTTCGTTCCAGCACGTGGCGATCCAGCATTTGGAGGAGCGGTTGACCC
TGGCCATGAAGGAGAGTGAGCGCCGCGGGGTCCACACGTTGGCTGTGGTG
GGTGGGGTGGCATCCAATCAGGCGATCCGGGCCCGCCTGCAGGTTTTGTG
TGAGAAAAGAAGCTTGGCCAGGAGGCTGGAAAAGGAACAGGAAAGAATAT
GGGATGAGGCAAACAGCGAGAACAAAGGTGGTGGGACcatggaggtggaa
gcccccctcccgccctgggAGCTAGtagtgccccccccccggttgTGCAC
TGACAACGGTGTGATGGTAGCTTGGGCGGCGATAGAGAAGCTCCGATTGG
GTTACTCGGATGtcgtggaagggcgggatgTGCATGCCCGTTGGCCCTTT
GCTTCTTGGCAGAACTCAACGTGA back to top
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