rna1259, rna1259 (mRNA) Nannochloropsis gaditana

Overview
Namerna1259
Unique Namerna1259
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length940
Alignment locationCM002457.1:168762..170497 +

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Properties
Property NameValue
Productaryldialkylphosphatase
Orig transcript idgnl|cribi|Naga_100042g37.5669.mrna
Orig protein idgnl|cribi|Naga_100042g37.5669
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:168762..170497 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100042g37gene1213Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna1259rna1259-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29422.1cds1257Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna1259 ID=rna1259|Name=rna1259|organism=Nannochloropsis gaditana|type=mRNA|length=940bp
TGTCCGAAAAAGGCAGCTGAAGAAACGCACACATTTCTCACTCTTCGGAA
GCGAGCATGCAATGATGCCCTCGGTCTATCAATACTCACTTGCTCAATAA
TTCTGACTGTTTTTTATCAACAGGCCACAATGAGGGTCAGAGGCCTCGAG
CCGGGTAGCTTTTTCCAAGGACTCGTCCTTCTCAGTGCCGCGAGTCAGGC
AGGCAGACCTTTTGCCCAATCGCCTATCTGCCCTCTATCCCGAGAAAAAT
CACATTTTCCTGCCTTTTGTTCACCTTACTCGTCGCAGTCATGTCCGTGG
ATCATCACTCAGCGAGGTGGCGCCGTCAACCATGATAACGATACAAGAGA
GGGATTGCTCCTTCCAACGCCTGCATTTAAGGCAGCTGAAGAGACTTGGA
AGACTCCGCAGGGAGTGCAGTGGACGCAACTCCTTCTCGATTCTTTCGAG
AAAACCACTGGTTCATTCCTCCTTTCCAACCGCGACACGCTAGACGCAGC
AGAGCAAGCGAGAGCGCTTTTCTTCTCCTCCCGGGTCATTGTCTCGCATC
AGACACAACAGGATCCAGTGTTGTGCTACGGTAATGAGAAAGCATTGGCG
TTGTGGGAAATGGATTTGGAAACCTTGACCTCCTCTCCATCACGATACAC
GGCGGAGCCAGTTGCGCGAGAAGAACGGCAGCGTCTGCTCGATGAAGTTA
GGTCAAAAGGATACATAGACGACTATCGTGGTGTACGAATATCATCCACG
GGAAGCCGTTTCGAAATAGTGAAGGCGATAGTTTGGGAAGTGTATGATAC
ACTGGGAGTAAGGAGGGGTCAAGCAGCGACTTTTTCTGAATGGAGGACTT
TGTCAGGACAGGCCTCTGAGAACGCGTTTAAATGAAACAAAGCCACTTTC
GTTGATCAATGTCACATTGTTTATTTCTTGCTTTGGTTCG
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protein sequence of rna1259

>rna1259-protein ID=rna1259-protein|Name=rna1259|organism=Nannochloropsis gaditana|type=polypeptide|length=452bp
MIRTVTTSLETSLSVLCLGSDGLVLDESLTSAPSMSSSAFNQEEICLSNL
GAIRSNPGQYLWNLRLPSADEMLRELEAVLELPESLSSSTSCKVVIHSSC
PTSRDREPLSRLAARLEKKNIMVVTGVLPSDCQGSSTPETMATDLVHKLK
FGVEVSSPGPTSGTLPGLPGPTSALVPLKMERIGMGFLGLVDLPALRGGI
SEEEGKRLEGVLLKAMGMASRLCQGVPIFLTTHDVWGQEAFSESRALSII
DGVHAGGAKHAPIVFCRCPCHVHLLRSYAAILKYDDQVHLSFSFHGNAFY
ASPTAALASEVASDEEGARLVSLLCEEGFASRILLSHTITCRLKLQKYGG
FGYTHLPQHILPRLLRLGVSPSDLARVGGGNMRRLLAWWRPPPPVEKPVE
IGTCSWCKAAFEVRENAYFSKFAYVYCTSRCLSAHGDTGWKALDDSERKP
PG
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mRNA from alignment at CM002457.1:168762..170497+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna1259 ID=rna1259|Name=rna1259|organism=Nannochloropsis gaditana|type=mRNA|length=1736bp|location=Sequence derived from alignment at CM002457.1:168762..170497+ (Nannochloropsis gaditana)
CATCCATACCCTCCATACGCCCAATGAGCCGACCATTTATTGGTACAGCT
GCTCTGGAGAAGTGTTGACACATTGGGTGCGACGCTTGTGTATCTCAGGC
CCTATTTCATCATATCTCGTCATATATATTGCAGGTGTCGACGCAACTCA
TGCCAATAATAAAGCGTAAATAATAGAATAGCGTACGGTATCGACAACAG
AATTGTCATGATTAGGACGGTCACGACTTCTTTGGAAACTTCATTGTCCG
TCCTTTGCTTGGGTTCGGATGGTCTTGTTTTAGATGAGTCGCTGACCTCT
GCCCCGAGTATGTCTTCCAGCGCCTTCAACCAAGAAGAAATCTGCCTCTC
AAATCTGGGAGCCATTCGAAGTAATCCCGGACAGTACCTATGGAATCTAC
GTCTTCCCTCAGCAGATGAAATGCTGCGCGAACTCGAGGCTGTCTTGGAA
CTACCCGAGTCTCTCTCATCCAGCACTTCTTGCAAGGTGGTCATACACTC
CTCCTGTCCTACCTCTCGCGACCGTGAGCCCTTGAGTCGGCTGGCCGCCA
GGCTTGAAAAAAAGAATATTATGGTTGTGACAGGTGTCCTGCCATCCGAC
TGCCAAGGCTCCTCCACTCCCGAAACTATGGCCACGGACCTGGTTCATAA
GCTCAAATTTGGCGTCGAAGTCTCATCCCCAGGGCCAACCAGCGGGACCT
TACCTGGGTTGCCAGGGCCGACGAGCGCCCTCGTTCCTTTGAAAATGGAG
CGGATCGGGATGGGATTCTTGGGCCTGGTAGATTTGCCTGCCTTACGAGG
AGGAAtctcggaagaagagggcaagAGACTAGAGggcgtcctcctcaagg
CCATGGGCATggcctcccgcctctgtcAGGGCGTTCCGATCTTCCTGACC
ACCCACGACGTCTGGGGGCAGGAAGCATTTTCGGAAAGCAGGGCGCTAAG
CATTATTGATGGTGTGCACGCGGGTGGCGCCAAGCACGCCCCCATAGTCT
TTTGCCGTTGCCCGTGTCACGTGCATCTTCTCCGGTCCTACGCGGCTATT
TTAAAGTATGACGACCAAGtccatctctccttctccttccatgGTAATGC
TTTCTATGCGTCCCCTACTGCCGCTCTGGCCTCCGAGGTTGcctcggacg
aggaaggcgccCGGCTTGTAAGCCTCCTGTGCGAGGAGGGCTTCGCCTCC
CGGattctcctctcccacaccATCACTTGCCGTCTGAAACTCCAAAAATA
CGGAGGGTTCGGATACACGCACCTTCCCCAGCACATTctcccccgtcttc
ttcgtcttgGCGTGTCTCCTTCAGACCTCGCGAGAGTTGGGGGTGGGAAC
ATGCGACGCCTGTTGGCATGGTggcgcccccctcccccagtgGAGAAGCC
GGTGGAGATTGGAACATGTTCCTGGTGCAAAGCCGCCTTCGAGGTCCGGG
AAAATGCGTATTTCAGCAAATTTGCCTACGTCTACTGCACAAGTCGGTGT
TTGTCCGCCCATGGGGATACGGGCTGGAAGGCATTGGATGACTCGGAGCG
CAAGCCGCCAGGctgaaagggagagagggcgtaAGCAGAACACGGGAAAA
AGGGATCAGGGTAACAAAGTGGCGAAAAATGTAAGAATACATAACAAGGT
GACATGAGTGCAATGGTGGTTACCGTGTGTGGCAGTAATTCAGGGGGCTA
TAACACCGTAAAAAACGTCCTGAAACCTCTTTCTTT
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Coding sequence (CDS) from alignment at CM002457.1:168762..170497+

>rna1259 ID=rna1259|Name=rna1259|organism=Nannochloropsis gaditana|type=CDS|length=1359bp|location=Sequence derived from alignment at CM002457.1:168762..170497+ (Nannochloropsis gaditana)
ATGATTAGGACGGTCACGACTTCTTTGGAAACTTCATTGTCCGTCCTTTG
CTTGGGTTCGGATGGTCTTGTTTTAGATGAGTCGCTGACCTCTGCCCCGA
GTATGTCTTCCAGCGCCTTCAACCAAGAAGAAATCTGCCTCTCAAATCTG
GGAGCCATTCGAAGTAATCCCGGACAGTACCTATGGAATCTACGTCTTCC
CTCAGCAGATGAAATGCTGCGCGAACTCGAGGCTGTCTTGGAACTACCCG
AGTCTCTCTCATCCAGCACTTCTTGCAAGGTGGTCATACACTCCTCCTGT
CCTACCTCTCGCGACCGTGAGCCCTTGAGTCGGCTGGCCGCCAGGCTTGA
AAAAAAGAATATTATGGTTGTGACAGGTGTCCTGCCATCCGACTGCCAAG
GCTCCTCCACTCCCGAAACTATGGCCACGGACCTGGTTCATAAGCTCAAA
TTTGGCGTCGAAGTCTCATCCCCAGGGCCAACCAGCGGGACCTTACCTGG
GTTGCCAGGGCCGACGAGCGCCCTCGTTCCTTTGAAAATGGAGCGGATCG
GGATGGGATTCTTGGGCCTGGTAGATTTGCCTGCCTTACGAGGAGGAAtc
tcggaagaagagggcaagAGACTAGAGggcgtcctcctcaaggCCATGGG
CATggcctcccgcctctgtcAGGGCGTTCCGATCTTCCTGACCACCCACG
ACGTCTGGGGGCAGGAAGCATTTTCGGAAAGCAGGGCGCTAAGCATTATT
GATGGTGTGCACGCGGGTGGCGCCAAGCACGCCCCCATAGTCTTTTGCCG
TTGCCCGTGTCACGTGCATCTTCTCCGGTCCTACGCGGCTATTTTAAAGT
ATGACGACCAAGtccatctctccttctccttccatgGTAATGCTTTCTAT
GCGTCCCCTACTGCCGCTCTGGCCTCCGAGGTTGcctcggacgaggaagg
cgccCGGCTTGTAAGCCTCCTGTGCGAGGAGGGCTTCGCCTCCCGGattc
tcctctcccacaccATCACTTGCCGTCTGAAACTCCAAAAATACGGAGGG
TTCGGATACACGCACCTTCCCCAGCACATTctcccccgtcttcttcgtct
tgGCGTGTCTCCTTCAGACCTCGCGAGAGTTGGGGGTGGGAACATGCGAC
GCCTGTTGGCATGGTggcgcccccctcccccagtgGAGAAGCCGGTGGAG
ATTGGAACATGTTCCTGGTGCAAAGCCGCCTTCGAGGTCCGGGAAAATGC
GTATTTCAGCAAATTTGCCTACGTCTACTGCACAAGTCGGTGTTTGTCCG
CCCATGGGGATACGGGCTGGAAGGCATTGGATGACTCGGAGCGCAAGCCG
CCAGGctga
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Synonyms
Publications