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Properties
| Property Name | Value |
|---|
| Product | aureochrome1-like protein |
| Orig transcript id | gnl|cribi|Naga_100042g40.5653.mrna |
| Orig protein id | gnl|cribi|Naga_100042g40.5653 |
| Gene | AUR4 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:158911..160676 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1256 ID=rna1256|Name=rna1256|organism=Nannochloropsis gaditana|type=mRNA|length=1827bp
ATGGCATTGAGACTTGAAATACTCCGAATTACCGGTTTCGGCATGTACAC
CGCCTATGCCTTCGCCCATGCTTCTGGTGTCCATTTCACGGACTCAATTT
CCAGAATGAAAATCTCTTCACCCCCAACCTGTAAAATGGCCAACCCCTCG
AACGCCGACACCGCAGGCATTCGGCTTATTTTATTAGCTGTGATATTTGT
ATTTCTCTCCAAGTTCTTTCTCACTAGTAAGTTTAGGCTTCCATGGCAGT
GCCATTACCCACAGAAGGATGGAGACCTCCCAAAGCAACCGCAGCGGCCA
TTTTATCGCGACGAGGGGTCTCTATTGCCCATGCCCCCTCTATTTTACAC
GTCAGGAATCACGGTAGAGACACAGAAAGCGGCCCATTCTACTTTAAAAA
GTGTTGCGGAAAATTATCGGGTGGAATTGGGCATTCGCATGAAAGCACTA
CACGATATGGTGTACAAACACTTGCCGGGGTGGGAGGATGACAACCAAGA
GGAAAAAGAGGGTGCGCATGGCACGTGCATGAACAAAGATCGCCAACCAA
AAAGGCTCGCAGATGTGACAGAGGACTTGCAAGCGCGGATGTGGGAACAC
TTTCTTAAAATTCCTCCATGTTGGCAAGATAACGAAGATTTACTGGAAGA
TCTGCTTCGTCTTCCCACTCCAGTATATGCCTTGCCCTCCCACGAGCAAG
TCCCGCGCTCGTACCGTACACCCTGCTCAAGCATTAATCTCAACACATCT
TTCTCAAGCTCTCCTCCGCTTTATTCTGCACGTGCCAACGAAACACACTC
CCGGTCCCCGTCCGGTGCTTACACGGATGCCATGCAGATTTTCACACATC
TCTATCGCGATTGGACCCAGGACGGGCAGGATGTGCGTCGCAAAACGTAT
TTTCCCATCCTTGAAACGGTCAACCGCCTTTTCTCCGCGGATCAAAGGCT
CAGAGACCCGTCTCAGGGAGAAATCCACATACTAGTTCCGGGGGCGGGGC
TGGGGCGGTTGGCATTTGACCTTGCCTATGGGGAGCATGAGCCGAAAAAT
CAAGCCAGGCATGTGACAGCGATGGACATGAGCCCGGCAATGGTGGCGGC
GACCTGGGCTGTTCTTGGAGTGGTGCTGGATGCCGCCGTGGGTGAGCAAA
TGGGCACGAGCGACACCAGACGGGGCGAGTCAGAGAGGCGAGAGAAGGAC
GAGGTAGGGGGGCGTGTCTTCCATCCTTTCCTGCACGACCCGCTCTTGAA
CCAAAGGACGCATGTCCATCGGTTTTATGCCGCCTCTTTTCCCGACAAGG
AGGCCATACAGCTACTCGTTTGCTGCCTTAGGCGTCGCTCTCCCCCCCTG
GAAAGGATGCCCGGATCCACCCTTTTCCATCCATGTTCCTCCTTAGCCTT
GGAGCTCGGAGATTTCCTCCAGCTTGCCCATGTCCCCGCCTGGCGAACCA
GTCAGGACGCCGTCGTCACCTGCTTCTTCCTCGACACGGCGCCCAACCCG
CTGGCCTACCTCCGGGTAGTCGATCGTCTACTTCGACCGGGCGGGTACTG
GATCAACCTGGGACCTCTCAACTACCACCACACGCTGCCACAGGGGGCTT
TGCAGTTGACGTTGGAGGAGCTGGAAAGCGTAGCGGAGGCCTTGGGTCTG
CGTAAACAGGCGTCGACAAGCGGGCCGTTGGAGCGCTGTGCCTACCGCCC
TCATCCCCCTCTGACTCCTGAGGGGTTTGCCTGCGCGGAGCAGGAGGCGT
TCTTGCGTGTGGACATGTACCAACCAGAATTGAGCGTATTTCAAAAGGTG
TCAGCCCGAGATGAAGAAAATGGATGA back to topprotein sequence of rna1256 >rna1256-protein ID=rna1256-protein|Name=rna1256|organism=Nannochloropsis gaditana|type=polypeptide|length=477bp
MSTTTMQQQAPTMAAIQQPTSWGILSRNNSSTDLAGEAGGLEAPDQIKQE
AAAPLWTAPLYASANNSNPMADTVDLDEIFADDFLLPGMGMVPFGTEGDM
GPEDMFPGGLSCDTSVATNDNDDSAVASGMHGKGKGAQFANAAPQGKTED
KTNVRAAAVVRSAASRTRSGITTRLGLNKGQGRAVTGASSMLPSAVPSRA
RVPTRKGSLPVEEEEDVEEEEEEYETGSEEEGEGGDGRGARRRKKAKLTL
KPLTEAQRVERRERNREHAKRSRMRKKFMLESLQAQMLALRKENLRLRQL
VATKLPDKADTILRGCSSIKTQNLLSSVELGHHRALADHDGRLVSALQFA
QQNFTVSDPSLPDNPIIYASQGFLDLTGYTSDQIVGRNCRFLQGPGTDPA
AVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDMEGNIVNYVG
VQCKVEEAPMEEELKERVKTINFDEEE back to topmRNA from alignment at CM002457.1:158911..160676- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1256 ID=rna1256|Name=rna1256|organism=Nannochloropsis gaditana|type=mRNA|length=1766bp|location=Sequence derived from alignment at CM002457.1:158911..160676- (Nannochloropsis gaditana)
ATGTCTACGACCACCATGCAACAGCAGGCGCCAACCATGGCAGCAATACA
ACAGCCGACAAGCTGGGGTATTCTGTCGCGTAACAATAGCAGCACGGACT
TGGCAGGAGAGGCGGGAGGGTTAGAAGCACCAGATCAAATCAAGCAAGAG
GCTGCTGCACCGCTTTGGACCGCCCCTTTGTATGCTTCAGCCAACAATTC
CAATCCCATGGCCGATACGGTGGATTTGGACGAAATTTTTGCCGGTACGT
GGTTAGAGTGAGCCAGCATCACACCCTTGCGATGCGTCAAGCCGTTTCCG
TCCTTTCTGCGTGCTTTCCCCTCGTTCCATAGAAAGTATTCGTGCTAGAA
ATAGCAGTGTTTCAAAGTCATGTGGAAGGGTGCCTTACTAAGGTCTCGAT
CCTCGAATTCTTCCTCAGACGACTTCCTCCTACCCGGCATGGGCATGGTG
CCCTTTGGAACCGAGGGAGACATGGGGCCGGAGGACATGTTTCCCGGCGG
TCTGAGCTGCGATACCTCCGTTGCTACCAACGATAACGATGACTCGGCTG
TGGCGTCGGGCATGCACGGCAAAGGTAAAGGCGCTCAATTTGCGAATGCC
GCGCCCCAGGGGAAAACCGAAGACAAAACCAACGTGCGGGCGGCGGCGGT
GGTCCGGTCCGCCGCTTCTCGGACACGGAGTGGGATTACCACTCGGCTGG
GTTTGAACAAGGGACAGGGGCGAGCAGTGACCGGAGCATCTTCCATGCTT
CCCTCCGCGGTTCCGTCCCGGGCGCGGGTTCCCACTCGAAAAGGGTCGTT
GCCCGTGGAGGAAGAGGAAGACGTGGAGGAAGAGGAGGAGGAATACGAGA
CAGGGAGCGAAGAGGAAGGGGAAGGTGGGGACGGGCGCGGGGCCCGGCGG
CGGAAGAAGGCAAAGTTGACACTGAAGCCTTTGACGGAAGCGCAACGGGT
GGAACGCCGGGAACGCAACCGGGAGCATGCCAAGCGCTCTCGGATGCGCA
AGAAGTTCATGCTCGAGTCCCTTCAGGCGCAAATGCTTGCCCTGCGCAAG
GAGAATTTGAGGCTCCGGCAGCTAGTCGCCACCAAACTCCCTGACAAGGC
GGATACAATCCTACGGGGTTGCTCCTCCATAAAGACCCAAAACCTCCTCT
CCTCTGTCGAACTGGGGCACCACCGGGCGCTGGCCGACCACGATGGCAGG
CTCGTCTCCGCCCTCCAGTTTGCCCAGCAGAATTTCACTGTCTCAGATCC
CTCCCTCCCCGATAATCGTACGTGTCCCGTGGCTAGTCCCTCATTCCCCT
CTTGGTCGCTCCCTCCTCCCCTCTCTCCCTTGGTCCCACACGCGTGCCAC
CCCGAACCCTGTTGGTGCGATCCACGCCGACTTTGTCTCACTCACCGCTT
TATTCCTTGTATTCCCACACCACAGCGATCATATATGCCTCGCAAGGATT
TCTGGACCTGACGGGCTACACCTCCGATCAGATCGTGGGACGTAACTGTC
GGTTTCTGCAGGGCCCGGGGACGGATCCTGCGGCCGTGGACATTATTCGG
CGTGGCGTGGCATTGGGGGAGGACACTAGCGTATGTTTGTTGAATTATAG
GGCGGATGGAACCCCTTTCTGGAATCAATTTTTTGTGGCAGCACTGAGGG
ACATGGAGGGGAACATTGTGAACTACGTGGGCGTGCAATGTAAGGTAGAA
GAGGCGCCAATGGAAGAGGAATTGAAAGAGCGAGTCAAAACTATCAACTT
TGACGAAGAAGAATAA back to topCoding sequence (CDS) from alignment at CM002457.1:158911..160676- >rna1256 ID=rna1256|Name=rna1256|organism=Nannochloropsis gaditana|type=CDS|length=4302bp|location=Sequence derived from alignment at CM002457.1:158911..160676- (Nannochloropsis gaditana)
CGATCATATATGCCTCGCAAGGATTTCTGGACCTGACGGGCTACACCTCC
GATCAGATCGTGGGACGTAACTGTCGGTTTCTGCAGGGCCCGGGGACGGA
TCCTGCGGCCGTGGACATTATTCGGCGTGGCGTGGCATTGGGGGAGGACA
CTAGCGTATGTTTGTTGAATTATAGGGCGGATGGAACCCCTTTCTGGAAT
CAATTTTTTGTGGCAGCACTGAGGGACATGGAGGGGAACATTGTGAACTA
CGTGGGCGTGCAATGTAAGGTAGAAGAGGCGCCAATGGAAGAGGAATTGA
AAGAGCGAGTCAAAACTATCAACTTTGACGAAGAAGAATAAACGACTTCC
TCCTACCCGGCATGGGCATGGTGCCCTTTGGAACCGAGGGAGACATGGGG
CCGGAGGACATGTTTCCCGGCGGTCTGAGCTGCGATACCTCCGTTGCTAC
CAACGATAACGATGACTCGGCTGTGGCGTCGGGCATGCACGGCAAAGGTA
AAGGCGCTCAATTTGCGAATGCCGCGCCCCAGGGGAAAACCGAAGACAAA
ACCAACGTGCGGGCGGCGGCGGTGGTCCGGTCCGCCGCTTCTCGGACACG
GAGTGGGATTACCACTCGGCTGGGTTTGAACAAGGGACAGGGGCGAGCAG
TGACCGGAGCATCTTCCATGCTTCCCTCCGCGGTTCCGTCCCGGGCGCGG
GTTCCCACTCGAAAAGGGTCGTTGCCCGTGGAGGAAGAGGAAGACGTGGA
GGAAGAGGAGGAGGAATACGAGACAGGGAGCGAAGAGGAAGGGGAAGGTG
GGGACGGGCGCGGGGCCCGGCGGCGGAAGAAGGCAAAGTTGACACTGAAG
CCTTTGACGGAAGCGCAACGGGTGGAACGCCGGGAACGCAACCGGGAGCA
TGCCAAGCGCTCTCGGATGCGCAAGAAGTTCATGCTCGAGTCCCTTCAGG
CGCAAATGCTTGCCCTGCGCAAGGAGAATTTGAGGCTCCGGCAGCTAGTC
GCCACCAAACTCCCTGACAAGGCGGATACAATCCTACGGGGTTGCTCCTC
CATAAAGACCCAAAACCTCCTCTCCTCTGTCGAACTGGGGCACCACCGGG
CGCTGGCCGACCACGATGGCAGGCTCGTCTCCGCCCTCCAGTTTGCCCAG
CAGAATTTCACTGTCTCAGATCCCTCCCTCCCCGATAATCATGTCTACGA
CCACCATGCAACAGCAGGCGCCAACCATGGCAGCAATACAACAGCCGACA
AGCTGGGGTATTCTGTCGCGTAACAATAGCAGCACGGACTTGGCAGGAGA
GGCGGGAGGGTTAGAAGCACCAGATCAAATCAAGCAAGAGGCTGCTGCAC
CGCTTTGGACCGCCCCTTTGTATGCTTCAGCCAACAATTCCAATCCCATG
GCCGATACGGTGGATTTGGACGAAATTTTTGCCGCGATCATATATGCCTC
GCAAGGATTTCTGGACCTGACGGGCTACACCTCCGATCAGATCGTGGGAC
GTAACTGTCGGTTTCTGCAGGGCCCGGGGACGGATCCTGCGGCCGTGGAC
ATTATTCGGCGTGGCGTGGCATTGGGGGAGGACACTAGCGTATGTTTGTT
GAATTATAGGGCGGATGGAACCCCTTTCTGGAATCAATTTTTTGTGGCAG
CACTGAGGGACATGGAGGGGAACATTGTGAACTACGTGGGCGTGCAATGT
AAGGTAGAAGAGGCGCCAATGGAAGAGGAATTGAAAGAGCGAGTCAAAAC
TATCAACTTTGACGAAGAAGAATAAACGACTTCCTCCTACCCGGCATGGG
CATGGTGCCCTTTGGAACCGAGGGAGACATGGGGCCGGAGGACATGTTTC
CCGGCGGTCTGAGCTGCGATACCTCCGTTGCTACCAACGATAACGATGAC
TCGGCTGTGGCGTCGGGCATGCACGGCAAAGGTAAAGGCGCTCAATTTGC
GAATGCCGCGCCCCAGGGGAAAACCGAAGACAAAACCAACGTGCGGGCGG
CGGCGGTGGTCCGGTCCGCCGCTTCTCGGACACGGAGTGGGATTACCACT
CGGCTGGGTTTGAACAAGGGACAGGGGCGAGCAGTGACCGGAGCATCTTC
CATGCTTCCCTCCGCGGTTCCGTCCCGGGCGCGGGTTCCCACTCGAAAAG
GGTCGTTGCCCGTGGAGGAAGAGGAAGACGTGGAGGAAGAGGAGGAGGAA
TACGAGACAGGGAGCGAAGAGGAAGGGGAAGGTGGGGACGGGCGCGGGGC
CCGGCGGCGGAAGAAGGCAAAGTTGACACTGAAGCCTTTGACGGAAGCGC
AACGGGTGGAACGCCGGGAACGCAACCGGGAGCATGCCAAGCGCTCTCGG
ATGCGCAAGAAGTTCATGCTCGAGTCCCTTCAGGCGCAAATGCTTGCCCT
GCGCAAGGAGAATTTGAGGCTCCGGCAGCTAGTCGCCACCAAACTCCCTG
ACAAGGCGGATACAATCCTACGGGGTTGCTCCTCCATAAAGACCCAAAAC
CTCCTCTCCTCTGTCGAACTGGGGCACCACCGGGCGCTGGCCGACCACGA
TGGCAGGCTCGTCTCCGCCCTCCAGTTTGCCCAGCAGAATTTCACTGTCT
CAGATCCCTCCCTCCCCGATAATCATGTCTACGACCACCATGCAACAGCA
GGCGCCAACCATGGCAGCAATACAACAGCCGACAAGCTGGGGTATTCTGT
CGCGTAACAATAGCAGCACGGACTTGGCAGGAGAGGCGGGAGGGTTAGAA
GCACCAGATCAAATCAAGCAAGAGGCTGCTGCACCGCTTTGGACCGCCCC
TTTGTATGCTTCAGCCAACAATTCCAATCCCATGGCCGATACGGTGGATT
TGGACGAAATTTTTGCCGCGATCATATATGCCTCGCAAGGATTTCTGGAC
CTGACGGGCTACACCTCCGATCAGATCGTGGGACGTAACTGTCGGTTTCT
GCAGGGCCCGGGGACGGATCCTGCGGCCGTGGACATTATTCGGCGTGGCG
TGGCATTGGGGGAGGACACTAGCGTATGTTTGTTGAATTATAGGGCGGAT
GGAACCCCTTTCTGGAATCAATTTTTTGTGGCAGCACTGAGGGACATGGA
GGGGAACATTGTGAACTACGTGGGCGTGCAATGTAAGGTAGAAGAGGCGC
CAATGGAAGAGGAATTGAAAGAGCGAGTCAAAACTATCAACTTTGACGAA
GAAGAATAAACGACTTCCTCCTACCCGGCATGGGCATGGTGCCCTTTGGA
ACCGAGGGAGACATGGGGCCGGAGGACATGTTTCCCGGCGGTCTGAGCTG
CGATACCTCCGTTGCTACCAACGATAACGATGACTCGGCTGTGGCGTCGG
GCATGCACGGCAAAGGTAAAGGCGCTCAATTTGCGAATGCCGCGCCCCAG
GGGAAAACCGAAGACAAAACCAACGTGCGGGCGGCGGCGGTGGTCCGGTC
CGCCGCTTCTCGGACACGGAGTGGGATTACCACTCGGCTGGGTTTGAACA
AGGGACAGGGGCGAGCAGTGACCGGAGCATCTTCCATGCTTCCCTCCGCG
GTTCCGTCCCGGGCGCGGGTTCCCACTCGAAAAGGGTCGTTGCCCGTGGA
GGAAGAGGAAGACGTGGAGGAAGAGGAGGAGGAATACGAGACAGGGAGCG
AAGAGGAAGGGGAAGGTGGGGACGGGCGCGGGGCCCGGCGGCGGAAGAAG
GCAAAGTTGACACTGAAGCCTTTGACGGAAGCGCAACGGGTGGAACGCCG
GGAACGCAACCGGGAGCATGCCAAGCGCTCTCGGATGCGCAAGAAGTTCA
TGCTCGAGTCCCTTCAGGCGCAAATGCTTGCCCTGCGCAAGGAGAATTTG
AGGCTCCGGCAGCTAGTCGCCACCAAACTCCCTGACAAGGCGGATACAAT
CCTACGGGGTTGCTCCTCCATAAAGACCCAAAACCTCCTCTCCTCTGTCG
AACTGGGGCACCACCGGGCGCTGGCCGACCACGATGGCAGGCTCGTCTCC
GCCCTCCAGTTTGCCCAGCAGAATTTCACTGTCTCAGATCCCTCCCTCCC
CGATAATCATGTCTACGACCACCATGCAACAGCAGGCGCCAACCATGGCA
GCAATACAACAGCCGACAAGCTGGGGTATTCTGTCGCGTAACAATAGCAG
CACGGACTTGGCAGGAGAGGCGGGAGGGTTAGAAGCACCAGATCAAATCA
AGCAAGAGGCTGCTGCACCGCTTTGGACCGCCCCTTTGTATGCTTCAGCC
AACAATTCCAATCCCATGGCCGATACGGTGGATTTGGACGAAATTTTTGC
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