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Properties
| Property Name | Value |
|---|
| Product | N2227-like domain-containing protein |
| Orig transcript id | gnl|cribi|Naga_100042g41.5640.mrna |
| Orig protein id | gnl|cribi|Naga_100042g41.5640 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:156434..158533 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1255 ID=rna1255|Name=rna1255|organism=Nannochloropsis gaditana|type=mRNA|length=2905bp
GTGGCGTCAGCGTTCACGGGAGGGGGGGAAATGAACGACACCTTTAGCAA
GACATACCGGCTTTCCAGTGCCTTAGGCGTCGTTTCGCATCCATTTTGAA
TAAGCATGCCTTAGTTCTTTCGTGCAATAGGCGAATCAGATGCTGAATGA
AGGATAAGTGTCGCGGGAAAGCGTGAGCTTCATGACTCTCCTAACCTCCC
AACTACAAACTAGCTGGGCATGCTGATGGGCTTTTTGACCAACTTCAATG
GATGACATGCTATAAATTTTTACACAGCATTGGGTAAAAATGGCGTAATT
GTGCGGCCCGCGGAAAATCGAGCTATGAAATGGAATTTCCTCCTGATAGC
ACTGAGATATCTCCCTGTCAGAGCCCTTCAGTCGATTCTTCCACCACGAA
ATACAATGCAGGAGAAATCGCAGGGATGAATGCACTAAAAGATAGAAAAA
GCATATTGTTATACCAGCTGATTTGACATTGTCTCTCATAGGGGCTACTT
CGCCTCCGTCAGTCATGCTAGCCCTCGTGCATGACCGAGTTTTCCTAGCG
CTCACGCCCCGATCCGTCCTTGCTCCTCTTGGGGTGACAATCTGTTCCTT
CTCACAGGGACTACTTTTTCCGCGTGCATCCACCCACGCATGCTGCCTCA
GCCATTGCTGCGTGGCCGCCGTCTCCTCTTTGGCAGTGCTGGCATGATTC
TTTTGTTCACAGGACGTCTGGCCCCCCTCGCGGCTTGGGTCGCCCCGCGT
CCTTCTCCTGCCCCACGGAACTATCTTCCACAAGCCTTTGCTTCCCTCTC
CTCGTACTCGCTTGGACCTTTCTCTGCCTCTACACGCCTTGACAGAAGAA
GAACCAAAGGCCATGCCCGAAGCCGACTCTTCAGCAGCAGTACTCCGAGG
GTCTCTAGCCCAGCCTTGGAAACCCTCCGGGAAGCTATTGGGCGCAAAGG
GGACGAGATTCGAGGCTTGAAAGTTGGTGGAGCCGACAAAGCAGCTCTTC
AGCCCTTAGTAAGCGAGTTGTTGGACCTGAAAGCCCAGTTTGAAGACGTA
GCGGGCGTGCCCTACGACCCACCCAAGGGTGGCGGGGGGAAAAAACAAGG
CGCAAAGAATGGAGGCAAGCAGAAGACAAAGCTCGCAGCAGGCGACGCCG
ACGAGGAGGAAGGTGTGATGAAGCAGCATGCGGATCGAAGCTCCCTGGCC
ATTACTCCGCGCGACGAGAATTATTCGCAGTGGTACCTGGACGTGATCGC
CGCGGCGGATTTGGTGGACCAGAGTCCGGTGAAAGGGTGCATGGTCATCA
AGCCGTACGGCATGGCCCTCTGGGACGCCTTGCGCGACGAGCTTGACAAA
CGAATCAAAGCGAACGGCGCTCAAAACGCCTACTTTCCCCTCTTTATCCC
ACGCTCCTTCTTGAGCAAGGAAGCCGAGCACGTGGAAGGCTTTGCCAAAG
AATGCGCGGTCGTCACTCACCACCGTCTTTGTGTGGACCCAGCGGGCGGC
CCTGGCCTTGTCCCAGACCCAAGTGCCCAGCTCGAAGAACCCCTGATCGT
GCGACCGACGTCGGAGACGATGATTTGGAACATGTTTGGCAAGTGGATAA
CGTCCCATCGGGATCTGCCCCTCAAGATCAACCAATGGGCCAATGTAGTC
CGGTGGGAGATGCGGACACGGCCCTTCCTCCGGTCCTCCGAGTTCTTATG
GCAGGAAGGACACACCGCGCACGCGTCGCGGGAGGAGGCCGTGGGGTACG
CCCGCGATCAGTTGGATTTATATGGGAACGTGTGTAGGGACATGCTGGCC
CTGCCCGTCGTCAAGGGGGTGAAAAGCGCCAGCGAGCGTTTCGCGGGCGC
GGAGGAGACCTTCACGATTGAAGCCTTGATGCAAAACGGATGGGCGTTGC
AAAGCGGTACCAGTCATTTCTTGGGGCAAAACTTTGCCCGAGCCTTCGAC
GTGGATTTCCAGACGGCGGAGGGGACGCGGGAGTTGGTATGGGCCACCTC
CTGGGGGGTGAGTACGCGCCTGATCGGTGCTTTGGTGATGACGCATTCCG
ACGACAAGGGCCTGGTCCTGCCCCCCTCGGTCGCGCCAGTGCAGGTGGTG
GTCGTCCCGATTTTAAAGGGGGCGGGGAGCGAGGAGGATGACCGGACCAC
GGCTTTCATGAACACGGTCGCATCGGCCCTGCGGACCCAGAACGTACGGG
TGCATGTCGACAACCGCGCAAATATGCGGCCCGGTGCCAAATATTTCGAG
TGGGAACGGAAGGGGGTGCCGATACGCTTGGAGATAGGCCCTAGGGACGC
GGCGGCAGGGGTCGTGACCTTGGCGCGTCGCACGGGGGGGGCCAAAGAGA
CCATCCCGGCGGGGAACACCTTTGGGCACGTGATTCAAAACGAGCTGGAA
GCTTGCCAGTCCTACCTGTTGGAAGAAGCTGAGAAACGGGTGGCCTCGCA
CACGTACCGGGTAGACGCGTACGTGGAAATGAAAGAACGGCTTGCAGGGG
GAGGGCGGGAGGACATTGGGTTCTTCCTGGCCCCATGGAAAGATGACGCT
GTGAACGAGGCAGCCATCAAAGAAGATTGCCGAGCTACGATTCGCTGCTA
CCCCTTGGACTTGAACGCGGACCCTGACAGGGTCCAGGCACGGAAATGCT
TTTACAGCGGCGAACCGGCCACCCACATCGCCCTTTTCGCTCGGGCTTAT
TGAGAATATGTGGGAAAAGACGAGGGAGTTGGAGAGAGAGACGAGTGGGG
GGAAGAAGAGAAAGTAGTTTGCTTTCCCGCTGCGTCTATACATAGATACT
TTTTTTCCAAAAGAGAACGTGAGTCCAAAAGAACTGAAGGCAGAAGCATG
CACGAGTTGCTGTGGCCAAAGGGCCTGGGGGATGGACAATGCTTTCATCC
ATTTT back to topprotein sequence of rna1255 >rna1255-protein ID=rna1255-protein|Name=rna1255|organism=Nannochloropsis gaditana|type=polypeptide|length=608bp
MALRLEILRITGFGMYTAYAFAHASGVHFTDSISRMKISSPPTCKMANPS
NADTAGIRLILLAVIFVFLSKFFLTSKFRLPWQCHYPQKDGDLPKQPQRP
FYRDEGSLLPMPPLFYTSGITVETQKAAHSTLKSVAENYRVELGIRMKAL
HDMVYKHLPGWEDDNQEEKEGAHGTCMNKDRQPKRLADVTEDLQARMWEH
FLKIPPCWQDNEDLLEDLLRLPTPVYALPSHEQVPRSYRTPCSSINLNTS
FSSSPPLYSARANETHSRSPSGAYTDAMQIFTHLYRDWTQDGQDVRRKTY
FPILETVNRLFSADQRLRDPSQGEIHILVPGAGLGRLAFDLAYGEHEPKN
QARHVTAMDMSPAMVAATWAVLGVVLDAAVGEQMGTSDTRRGESERREKD
EVGGRVFHPFLHDPLLNQRTHVHRFYAASFPDKEAIQLLVCCLRRRSPPL
ERMPGSTLFHPCSSLALELGDFLQLAHVPAWRTSQDAVVTCFFLDTAPNP
LAYLRVVDRLLRPGGYWINLGPLNYHHTLPQGALQLTLEELESVAEALGL
RKQASTSGPLERCAYRPHPPLTPEGFACAEQEAFLRVDMYQPELSVFQKV
SARDEENG back to topmRNA from alignment at CM002457.1:156434..158533- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1255 ID=rna1255|Name=rna1255|organism=Nannochloropsis gaditana|type=mRNA|length=2100bp|location=Sequence derived from alignment at CM002457.1:156434..158533- (Nannochloropsis gaditana)
ATGGCATTGAGACTTGAAATACTCCGAATTACCGGTTTCGGCATGTCGCA
TAAGGACCCGATCTATTCAGGATAAAGACGGGAATATGAAGGAAAAATGA
CAAGAGATCCTCTAAAGCAGGCGTTTACACATTTCTGCAACCGCAGAGCC
ATACAGTAAATAATTTCTTTCGGGCATCGGACCATACACAGCTCGGGAAT
CGGGGGGGGTAGGAGGTTAAAACCTTGATCCTCTTCGGAGGATCAAATCC
GTGATACATATATAAATTTTAAGCTTTCTGGCACCTCTACAATCGCGTCC
AAACCCATTTCAGATAGGTACACCGCCTATGCCTTCGCCCATGCTTCTGG
TGTCCATTTCACGGACTCAATTTCCAGAATGAAAATCTCTTCACCCCCAA
CCTGTAAAATGGCCAACCCCTCGAACGCCGACACCGCAGGCATTCGGCTT
ATTTTATTAGCTGTGATATTTGTATTTCTCTCCAAGTTCTTTCTCACTAG
TAAGTTTAGGCTTCCATGGCAGTGCCATTACCCACAGAAGGATGGAGACC
TCCCAAAGCAACCGCAGCGGCCATTTTATCGCGACGAGGGGTCTCTATTG
CCCATGCCCCCTCTATTTTACACGTCAGGAATCACGGTAGAGACACAGAA
AGCGGCCCATTCTACTTTAAAAAGTGTTGCGGAAAATTATCGGGTGGAAT
TGGGCATTCGCATGAAAGCACTACACGATATGGTGTACAAACACTTGCCG
GGGTGGGAGGATGACAACCAAGAGGAAAAAGAGGGTGCGCATGGCACGTG
CATGAACAAAGATCGCCAACCAAAAAGGCTCGCAGATGTGACAGAGGACT
TGCAAGCGCGGATGTGGGAACACTTTCTTAAAATTCCTCCATGTTGGCAA
GATAACGAAGATTTACTGGAAGATCTGCTTCGTCTTCCCACTCCAGTATA
TGCCTTGCCCTCCCACGAGCAAGTCCCGCGCTCGTACCGTACACCCTGCT
CAAGCATTAATCTCAACACATCTTTCTCAAGCTCTCCTCCGCTTTATTCT
GCACGTGCCAACGAAACACACTCCCGGTCCCCGTCCGGTGCTTACACGGA
TGCCATGCAGATTTTCACACATCTCTATCGCGATTGGACCCAGGACGGGC
AGGATGTGCGTCGCAAAACGTATTTTCCCATCCTTGAAACGGTCAACCGC
CTTTTCTCCGCGGATCAAAGGCTCAGAGACCCGTCTCAGGGAGAAATCCA
CATACTAGTTCCGGGGGCGGGGCTGGGGCGGTTGGCATTTGACCTTGCCT
ATGGGGAGCATGAGCCGAAAAATCAAGCCAGGCATGTGACAGCGATGGAC
ATGAGCCCGGCAATGGTGGCGGCGACCTGGGCTGTTCTTGGAGTGGTGCT
GGATGCCGCCGTGGGTGAGCAAATGGGCACGAGCGACACCAGACGGGGCG
AGTCAGAGAGGCGAGAGAAGGACGAGGTAGGGGGGCGTGTCTTCCATCCT
TTCCTGCACGACCCGCTCTTGAACCAAAGGACGCATGTCCATCGGTTTTA
TGCCGCCTCTTTTCCCGACAAGGAGGCCATACAGCTACTCGTTTGCTGCC
TTAGGCGTCGCTCTCCCCCCCTGGAAAGGATGCCCGGATCCACCCTTTTC
CATCCATGTTCCTCCTTAGCCTTGGAGCTCGGAGATTTCCTCCAGCTTGC
CCATGTCCCCGCCTGGCGAACCAGTCAGGACGCCGTCGTCACCTGCTTCT
TCCTCGACACGGCGCCCAACCCGCTGGCCTACCTCCGGGTAGTCGATCGT
CTACTTCGACCGGGCGGGTACTGGATCAACCTGGGACCTCTCAACTACCA
CCACACGCTGCCACAGGGGGCTTTGCAGTTGACGTTGGAGGAGCTGGAAA
GCGTAGCGGAGGCCTTGGGTCTGCGTAAACAGGCGTCGACAAGCGGGCCG
TTGGAGCGCTGTGCCTACCGCCCTCATCCCCCTCTGACTCCTGAGGGGTT
TGCCTGCGCGGAGCAGGAGGCGTTCTTGCGTGTGGACATGTACCAACCAG
AATTGAGCGTATTTCAAAAGGTGTCAGCCCGAGATGAAGAAAATGGATGA
back to topCoding sequence (CDS) from alignment at CM002457.1:156434..158533- >rna1255 ID=rna1255|Name=rna1255|organism=Nannochloropsis gaditana|type=CDS|length=3654bp|location=Sequence derived from alignment at CM002457.1:156434..158533- (Nannochloropsis gaditana)
GTACACCGCCTATGCCTTCGCCCATGCTTCTGGTGTCCATTTCACGGACT
CAATTTCCAGAATGAAAATCTCTTCACCCCCAACCTGTAAAATGGCCAAC
CCCTCGAACGCCGACACCGCAGGCATTCGGCTTATTTTATTAGCTGTGAT
ATTTGTATTTCTCTCCAAGTTCTTTCTCACTAGTAAGTTTAGGCTTCCAT
GGCAGTGCCATTACCCACAGAAGGATGGAGACCTCCCAAAGCAACCGCAG
CGGCCATTTTATCGCGACGAGGGGTCTCTATTGCCCATGCCCCCTCTATT
TTACACGTCAGGAATCACGGTAGAGACACAGAAAGCGGCCCATTCTACTT
TAAAAAGTGTTGCGGAAAATTATCGGGTGGAATTGGGCATTCGCATGAAA
GCACTACACGATATGGTGTACAAACACTTGCCGGGGTGGGAGGATGACAA
CCAAGAGGAAAAAGAGGGTGCGCATGGCACGTGCATGAACAAAGATCGCC
AACCAAAAAGGCTCGCAGATGTGACAGAGGACTTGCAAGCGCGGATGTGG
GAACACTTTCTTAAAATTCCTCCATGTTGGCAAGATAACGAAGATTTACT
GGAAGATCTGCTTCGTCTTCCCACTCCAGTATATGCCTTGCCCTCCCACG
AGCAAGTCCCGCGCTCGTACCGTACACCCTGCTCAAGCATTAATCTCAAC
ACATCTTTCTCAAGCTCTCCTCCGCTTTATTCTGCACGTGCCAACGAAAC
ACACTCCCGGTCCCCGTCCGGTGCTTACACGGATGCCATGCAGATTTTCA
CACATCTCTATCGCGATTGGACCCAGGACGGGCAGGATGTGCGTCGCAAA
ACGTATTTTCCCATCCTTGAAACGGTCAACCGCCTTTTCTCCGCGGATCA
AAGGCTCAGAGACCCGTCTCAGGGAGAAATCCACATACTAGTTCCGGGGG
CGGGGCTGGGGCGGTTGGCATTTGACCTTGCCTATGGGGAGCATGAGCCG
AAAAATCAAGCCAGGCATGTGACAGCGATGGACATGAGCCCGGCAATGGT
GGCGGCGACCTGGGCTGTTCTTGGAGTGGTGCTGGATGCCGCCGTGGGTG
AGCAAATGGGCACGAGCGACACCAGACGGGGCGAGTCAGAGAGGCGAGAG
AAGGACGAGGTAGGGGGGCGTGTCTTCCATCCTTTCCTGCACGACCCGCT
CTTGAACCAAAGGACGCATGTCCATCGGTTTTATGCCGCCTCTTTTCCCG
ACAAGGAGGCCATACAGCTACTCGTTTGCTGCCTTAGGCGTCGCTCTCCC
CCCCTGGAAAGGATGCCCGGATCCACCCTTTTCCATCCATGTTCCTCCTT
AGCCTTGGAGCTCGGAGATTTCCTCCAGCTTGCCCATGTCCCCGCCTGGC
GAACCAGTCAGGACGCCGTCGTCACCTGCTTCTTCCTCGACACGGCGCCC
AACCCGCTGGCCTACCTCCGGGTAGTCGATCGTCTACTTCGACCGGGCGG
GTACTGGATCAACCTGGGACCTCTCAACTACCACCACACGCTGCCACAGG
GGGCTTTGCAGTTGACGTTGGAGGAGCTGGAAAGCGTAGCGGAGGCCTTG
GGTCTGCGTAAACAGGCGTCGACAAGCGGGCCGTTGGAGCGCTGTGCCTA
CCGCCCTCATCCCCCTCTGACTCCTGAGGGGTTTGCCTGCGCGGAGCAGG
AGGCGTTCTTGCGTGTGGACATGTACCAACCAGAATTGAGCGTATTTCAA
AAGGTGTCAGCCCGAGATGAAGAAAATGGATGAATGGCATTGAGACTTGA
AATACTCCGAATTACCGGTTTCGGCATGTACACCGCCTATGCCTTCGCCC
ATGCTTCTGGTGTCCATTTCACGGACTCAATTTCCAGAATGAAAATCTCT
TCACCCCCAACCTGTAAAATGGCCAACCCCTCGAACGCCGACACCGCAGG
CATTCGGCTTATTTTATTAGCTGTGATATTTGTATTTCTCTCCAAGTTCT
TTCTCACTAGTAAGTTTAGGCTTCCATGGCAGTGCCATTACCCACAGAAG
GATGGAGACCTCCCAAAGCAACCGCAGCGGCCATTTTATCGCGACGAGGG
GTCTCTATTGCCCATGCCCCCTCTATTTTACACGTCAGGAATCACGGTAG
AGACACAGAAAGCGGCCCATTCTACTTTAAAAAGTGTTGCGGAAAATTAT
CGGGTGGAATTGGGCATTCGCATGAAAGCACTACACGATATGGTGTACAA
ACACTTGCCGGGGTGGGAGGATGACAACCAAGAGGAAAAAGAGGGTGCGC
ATGGCACGTGCATGAACAAAGATCGCCAACCAAAAAGGCTCGCAGATGTG
ACAGAGGACTTGCAAGCGCGGATGTGGGAACACTTTCTTAAAATTCCTCC
ATGTTGGCAAGATAACGAAGATTTACTGGAAGATCTGCTTCGTCTTCCCA
CTCCAGTATATGCCTTGCCCTCCCACGAGCAAGTCCCGCGCTCGTACCGT
ACACCCTGCTCAAGCATTAATCTCAACACATCTTTCTCAAGCTCTCCTCC
GCTTTATTCTGCACGTGCCAACGAAACACACTCCCGGTCCCCGTCCGGTG
CTTACACGGATGCCATGCAGATTTTCACACATCTCTATCGCGATTGGACC
CAGGACGGGCAGGATGTGCGTCGCAAAACGTATTTTCCCATCCTTGAAAC
GGTCAACCGCCTTTTCTCCGCGGATCAAAGGCTCAGAGACCCGTCTCAGG
GAGAAATCCACATACTAGTTCCGGGGGCGGGGCTGGGGCGGTTGGCATTT
GACCTTGCCTATGGGGAGCATGAGCCGAAAAATCAAGCCAGGCATGTGAC
AGCGATGGACATGAGCCCGGCAATGGTGGCGGCGACCTGGGCTGTTCTTG
GAGTGGTGCTGGATGCCGCCGTGGGTGAGCAAATGGGCACGAGCGACACC
AGACGGGGCGAGTCAGAGAGGCGAGAGAAGGACGAGGTAGGGGGGCGTGT
CTTCCATCCTTTCCTGCACGACCCGCTCTTGAACCAAAGGACGCATGTCC
ATCGGTTTTATGCCGCCTCTTTTCCCGACAAGGAGGCCATACAGCTACTC
GTTTGCTGCCTTAGGCGTCGCTCTCCCCCCCTGGAAAGGATGCCCGGATC
CACCCTTTTCCATCCATGTTCCTCCTTAGCCTTGGAGCTCGGAGATTTCC
TCCAGCTTGCCCATGTCCCCGCCTGGCGAACCAGTCAGGACGCCGTCGTC
ACCTGCTTCTTCCTCGACACGGCGCCCAACCCGCTGGCCTACCTCCGGGT
AGTCGATCGTCTACTTCGACCGGGCGGGTACTGGATCAACCTGGGACCTC
TCAACTACCACCACACGCTGCCACAGGGGGCTTTGCAGTTGACGTTGGAG
GAGCTGGAAAGCGTAGCGGAGGCCTTGGGTCTGCGTAAACAGGCGTCGAC
AAGCGGGCCGTTGGAGCGCTGTGCCTACCGCCCTCATCCCCCTCTGACTC
CTGAGGGGTTTGCCTGCGCGGAGCAGGAGGCGTTCTTGCGTGTGGACATG
TACCAACCAGAATTGAGCGTATTTCAAAAGGTGTCAGCCCGAGATGAAGA
AAATGGATGAATGGCATTGAGACTTGAAATACTCCGAATTACCGGTTTCG
GCAT back to top
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