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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100305g8.5918.mrna |
| Orig protein id | gnl|cribi|Naga_100305g8.5918 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:138851..140464 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1247 ID=rna1247|Name=rna1247|organism=Nannochloropsis gaditana|type=mRNA|length=905bp
TATGTGCGTTGGGAGACAAAAACTTGGAAGACTGGAGGAGCTGAGGACCA
TCCATCTCCTCCCTTGCTCCCTCGCTGCTTCTTCGTTGCTCACAGCAGGA
TTACACGCAATCTGAAAGCTTTGACAAGGCTTTGACGCACGCATTGAGAA
AATGTCGTAATTGAGCGTAGTAATCAAGGACACAGACGGTGGTGACCTGG
AGATAAAGTGCTGCCAAGGCATCTTTTCTACTGTCATCCATCCTACACAC
CGTGCCTCGGTCTCGTCCCGGTCTCATCCCATTTCTCACTCTTTTCTATT
TTGCAGGCGGATCTGTTTCAACCATGCAGATCTTCGTCAAGACCCTGACG
GGCAAGACCATCACATTGGATGTCGAGCCCAGCGATACCATCGAAAATGT
GAAGCAAAAGATTCAAGACAAGGAGGGCATTCCCCCCGATCAGCAGCGCC
TAATTTTCGCAGGAAAGCAGCTGGAAGACGGACGCACGCTGTCTGACTAC
AACATTCAGAAAGAGTCAACCTTGCACTTGGTCTTGCGCTTGCGTGGTGG
GGGCAAGAAGCGCAAGAAGAAGGTATACACGAAACCCAAGAAGATCAAGC
ATAAGCACAAGTCTGTGAAACTGGCCACCCTGAAATTTTATAAGGTGGAG
GATGGAGGCAAGGTGAAGCGTTTGCGAAAGGATTGCCCGGATTGCGGTGC
GGGTGTTCGCCTGGCTGTGCATGCTGACCGGTACTACTGCGGCAGGTGCA
CTGTGGCGTACAAATTCACGTCGACGCCAGCGGTATGAGGCGGCGGCTCC
AAGGAAGGGGGTAGGCCATGACTATACCTGCAGTGATATCCTGGTCTAGG
TGGGAGGGGGATGGGGTCTCAGACGCGGAGGAGGGAGCGGGACGAGGGGG
AAGGG back to topprotein sequence of rna1247 >rna1247-protein ID=rna1247-protein|Name=rna1247|organism=Nannochloropsis gaditana|type=polypeptide|length=473bp
TPSHDRPLDFSGTSNTLPPGPASTPLFSLAEKVALVQRGIYPYDWSGYLS
GTPSTFILPSFSSAGDPDALFQDMYRKTAKPKKLPSLPFLPRLPQALALP
LDLLAALPAIPSQAFRTVDAARRLNKQAASRQPSRQLWAQSLAMASTIAR
PLLEQPTGSRQRLPSPDEKRLPLRGEKRSPRSQRPEGPQQEEELMRQGRS
RRFREGNADGREGPPAYPKEEEEDEPSWAPRSRTRSQWWDGIRPRRPSDV
VASPFSASSSLPSSPPVLDARVEASGTGADVRAQIPRTEATSLGLDPGSF
PSLSSLMEDWEEEEGEAGMEEVMSVSRMGRARGGARGGGATVMDGRETAW
EGGREGGRVEVLYATELKGGDVRRLGGGEEEVIELRVEEVEEEGWEAKDW
STVLGKVGLRMLDVALLGLEYVTVEGLPRVQKRLVTAGKRLQQAAWGERG
KPGWDLMPAFEKPMDAKTMSTRR back to topmRNA from alignment at CM002457.1:138851..140464- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1247 ID=rna1247|Name=rna1247|organism=Nannochloropsis gaditana|type=mRNA|length=1614bp|location=Sequence derived from alignment at CM002457.1:138851..140464- (Nannochloropsis gaditana)
ACCCCCTCCCACGACCGACCGCTAGACTTTTCCGGGACTAGCAACACCCT
TCCACCAGGCCCAGCGTCCACCCCTCTCTTCAGCCTGGCCGAGAAAGTCG
CGCTCGTCCAACGCGGCATCTACCCCTACGATTGGTCCGGCTATCTGTCA
GGCACACCTTCCACATTCATCCTCCCTTCCTTTTCCTCCGCCGGCGATCC
CGACGCACTCTTTCAAGACATGTACCGCAAAACGGCCAAACCAAAAAAGC
TGCCATCCCTTCCCTTCCTGCCCCGCCTCCCCCAGGCCCTTGCCCTCCCC
CTCGACCTCCTGGCCGCCCTCCCTGCGATCCCCAGCCAAGCCTTCCGCAC
CGTGGACGCTGCCCGCCGTCTCAACAAACAGGCCGCCAGCAGGCAGCCCT
CTAGGCAGCTGTGGGCGCAGAGTCTGGCCATGGCCTCCACCATCGCCCGT
CCCCTCCTCGAGCAACCGACCGGGTCCCGGCAACGGCTGCCGTCACCGGA
CGAGAAACGGTTACCGTTACGAGGAGAAAAACGGTCCCCGCGGTCGCAAC
GTCCGGAAGGGCCTCAACAAGAGGAAGAGCTGATGCGACAAGGACGGTCG
CGTAGATTCAGGGAGGGGAATGCGGATGGTCGGGAAGGACCTCCGGCCTA
TCCCAAGGAAGAAGAGGAGGACGAGCCGAGCTGGGCACCGCGGTCGAGAA
CGCGATCCCAATGGTGGGATGGCATACGGCCAAGGCGGCCCAGCGACGTG
GTTGCATCCCCTTTCTCCGCCTCGTCCTCCCTCCCGTCCTCGCCCCCTGT
CCTCGATGCACGTGTCGAAGCCTCAGGGACGGGGGCGGACGTTCGCGCCC
AAATTCCGCGAACGGAGGCGACAAGCCTGGGCCTGGATCCGGGTAGCTTT
CCATCGCTGTCTTCCTTGATGGAAGACTGGGAGGAAGAGGAGGGGGAGGC
AGGGATGGAGGAAGTGATGAGCGTCTCTCGCATGGGCCGGGCGCGAGGAG
GCGCAAGGGGAGGTGGTGCGACGGTGATGGATGGGAGGGAGACGGCATGG
GAGGGAGGGAGGGAGGGAGGGAGGGTAGAGGTACTGTATGCGACCGAGTT
GAAAGGGGGCGACGTGCGCCGTTTGGGCGGGGGAGAGGAGGAAGTGATCG
AGCTTCGGGTGGAGGAGGTGGAGGAGGAAGGGTGGGAGGCAAAGGATTGG
TCAACCGTGTTGGGCAAGGTGGGCCTGCGGATGCTGGACGTGGCCCTGCT
CGGCTTGGAGTATGTTACGGTGGAAGGCCTACCACGGGTCCAGAAACGGC
TGGTAACGGCCGGGAAACGGTTGCAACAGGCCGCCTGGGGGGAAAGAGGA
AAGCCTGGGTGGGACCTGATGCCGGCGTTCGAGAAGCCCATGGACGCCAA
GACCATGTCCACGCGCCGATAGTCCCTTCCTTCCCTTCCTTCCTTCCGCC
CTCCATCCTTCCCGCCTTGCCTTCCTTCCTCCCTTCCGTCGGCCCCTACT
TCCCTCCCACCCTGTTTTCTTCCCCTCCATGGACTGGGAAATGATTTATA
CACGTTTTCCTTCCCTACAATAACACTTCAAGAAAGCAAAATGAACAATA
ACTTTTCTTTGTAC back to topCoding sequence (CDS) from alignment at CM002457.1:138851..140464- >rna1247 ID=rna1247|Name=rna1247|organism=Nannochloropsis gaditana|type=CDS|length=1422bp|location=Sequence derived from alignment at CM002457.1:138851..140464- (Nannochloropsis gaditana)
ACCCCCTCCCACGACCGACCGCTAGACTTTTCCGGGACTAGCAACACCCT
TCCACCAGGCCCAGCGTCCACCCCTCTCTTCAGCCTGGCCGAGAAAGTCG
CGCTCGTCCAACGCGGCATCTACCCCTACGATTGGTCCGGCTATCTGTCA
GGCACACCTTCCACATTCATCCTCCCTTCCTTTTCCTCCGCCGGCGATCC
CGACGCACTCTTTCAAGACATGTACCGCAAAACGGCCAAACCAAAAAAGC
TGCCATCCCTTCCCTTCCTGCCCCGCCTCCCCCAGGCCCTTGCCCTCCCC
CTCGACCTCCTGGCCGCCCTCCCTGCGATCCCCAGCCAAGCCTTCCGCAC
CGTGGACGCTGCCCGCCGTCTCAACAAACAGGCCGCCAGCAGGCAGCCCT
CTAGGCAGCTGTGGGCGCAGAGTCTGGCCATGGCCTCCACCATCGCCCGT
CCCCTCCTCGAGCAACCGACCGGGTCCCGGCAACGGCTGCCGTCACCGGA
CGAGAAACGGTTACCGTTACGAGGAGAAAAACGGTCCCCGCGGTCGCAAC
GTCCGGAAGGGCCTCAACAAGAGGAAGAGCTGATGCGACAAGGACGGTCG
CGTAGATTCAGGGAGGGGAATGCGGATGGTCGGGAAGGACCTCCGGCCTA
TCCCAAGGAAGAAGAGGAGGACGAGCCGAGCTGGGCACCGCGGTCGAGAA
CGCGATCCCAATGGTGGGATGGCATACGGCCAAGGCGGCCCAGCGACGTG
GTTGCATCCCCTTTCTCCGCCTCGTCCTCCCTCCCGTCCTCGCCCCCTGT
CCTCGATGCACGTGTCGAAGCCTCAGGGACGGGGGCGGACGTTCGCGCCC
AAATTCCGCGAACGGAGGCGACAAGCCTGGGCCTGGATCCGGGTAGCTTT
CCATCGCTGTCTTCCTTGATGGAAGACTGGGAGGAAGAGGAGGGGGAGGC
AGGGATGGAGGAAGTGATGAGCGTCTCTCGCATGGGCCGGGCGCGAGGAG
GCGCAAGGGGAGGTGGTGCGACGGTGATGGATGGGAGGGAGACGGCATGG
GAGGGAGGGAGGGAGGGAGGGAGGGTAGAGGTACTGTATGCGACCGAGTT
GAAAGGGGGCGACGTGCGCCGTTTGGGCGGGGGAGAGGAGGAAGTGATCG
AGCTTCGGGTGGAGGAGGTGGAGGAGGAAGGGTGGGAGGCAAAGGATTGG
TCAACCGTGTTGGGCAAGGTGGGCCTGCGGATGCTGGACGTGGCCCTGCT
CGGCTTGGAGTATGTTACGGTGGAAGGCCTACCACGGGTCCAGAAACGGC
TGGTAACGGCCGGGAAACGGTTGCAACAGGCCGCCTGGGGGGAAAGAGGA
AAGCCTGGGTGGGACCTGATGCCGGCGTTCGAGAAGCCCATGGACGCCAA
GACCATGTCCACGCGCCGATAG back to top
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