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Properties
| Property Name | Value |
|---|
| Product | nucleoside-diphosphate sugar epimerase |
| Orig transcript id | gnl|cribi|Naga_100083g19.6784.mrna |
| Orig protein id | gnl|cribi|Naga_100083g19.6784 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:82828..84826 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1218 ID=rna1218|Name=rna1218|organism=Nannochloropsis gaditana|type=mRNA|length=3630bp
AACCGCAAATTCGTACCTCTCATACATGTATACACAGGCAATATCTGGCA
AAGTACATGCACTAAAATTACAAATTCCATTGTAAATAAAGGTATTAAGG
CATTTTGCTTTCATTGGTTGCCCTTCCGAGGATCTGAATGCTAGCATTGA
CAACTCTTTGGAATCGAAGAAGACTGATAACGACGCCTCCAACTGAAACT
CTGTGACATTTTTTGGGGTACATTATCTCCTGCGAAAAGCTTGTTATAAG
CCATGAAAACTTCAAGCCTACATTCAACCAAACAATTGAGAAAAATTCCT
TGCACATTGCCGGAGCTGTGGTCAAATGATCCACAGTTGGCAGATCATCA
AGATGTGCTTGAGGATGTCATGGCCGAAGTCTACGATTGGGCAGACCTAT
TTGATATGCCTTTGGAGACCTTGAACAAGTGCTTCCAAATCTCGGTGGAA
GAAAACCGAAAACGATCCATGCATCCCGATCTTTGGGCCCCCGTGCCCGA
CATCATGGACGCGCTTCGAAGAACGGCAGAAGACATGGGCGACGAGGTGT
TTGCGACTTGGATAGAAGCTGGCGGTAAAGAGACACGGCATTGGTCTTTC
CGGGATACTTGGGAAGCGGCGGGGGCCGTGGCCCATGCCTTGGTGCATGA
CTGGGGAGTACAGCCCGGGGATCGAGTCATGTTGTGCTATAATTTTAGTT
TTGAGTATTTCCCTGCCTTTCTAGGCTGCTTGCGGGCGGGTGCCGTGGCC
TGTCCAGTGTATCCGATCGATCCGGGGAAGATGGAAATCGCGCTAAAGAA
ATTTAAGCTGGTGGTGGAGGATACGGGGGCCCGATTAGTCTTGACGGACA
ACTTGATCAACTGGATCAGGATCGGATGTGGGCTCTTTTATTCCCATCTG
ATGCCGAAAGGCCTTGAATGGAGGGTCACTGACCAGCTCGTCCAGCGCCC
TCCCTCCTCCCACCCCTTGCCTCCTCCTTCGTACGATTACCCCGACCGTG
CGCCATCCGACATTGCCTTTCTTCAGTACACGAGCGGCTCCACGGGAGAC
CCCAAGGGCGTGATGATTACCTATGCAAACTTAGGCGCCAATGTTGGCCT
CATTGCCGGTGCCCAACGCTTCGCCTTTTCCTATGCCGACCTGATCCCGG
TCATGCACGTGAACGGCGACCGCTCTTGGTTCACGCGCTCGCGTTCTGTG
TCCTGGCTGCCCATGTATCATGACATGGGCTTGGTCTATGGTGTGGTGGC
GCCTTTTTTCATGGGCGCACGCATGCATTACCTGTCGCCGATCACCTTTT
TGAAAGACCCATGCCTGTGGATCCGCTTGTTAGCCAAGAAGAAGGCAACA
TGGGCGGCGGGGCCAGATTTCGCCTACCGACTGTGCTCGAAAAAGTGGGA
CGCCAAGAAATGGCCGGTGGATGAATACTCCCTCACGCACATCATCTACA
TGCACACGGGGGCGGAGCCAATTCAATCCACGACGCTGGTGGATTTCAAC
CGTGTCTTCCGTCCTTATCGCTTGCATGCCCGGGCTCTTTCTCCGTGCTA
CGGCTTAGCGGAGAGTGTGGTGTGCGTCTCCTGGTTTGATCCGGTAGCCA
ACCCTCCTGGGAGCCTTATCGCTGGAGGGGACAAGCCAGGATACGTCTGT
TGTGCAGCGGATTTCCGGGTGGATCTGAGAATTGTGGATCCGGACACGTG
CGAAGAAATGCAAGACGGTACGGCGGGGGAACTTTGGGTGTCGGGACCCT
CCGTCGCTTTGGGGTACTGGAACCAGCCAGCGCTGACCAAGACTGCATTC
CGGGCCAGACTAAGCCGGGCAGCGCCCTTAGAGGCTCGGCCGTGGGCGAG
GTTTGGGAACGGGGAGTACCTGAGGACCGGGGACGTCGCCTTTATGCAAG
ATGGCCGACTTTACTTTTCTGGTCGTTTAAAGGACATGATGATCATCCAT
GGGAAGCGTTACTATGCCCAGGATATTGAATTTCCGGCTCAGGACGCCTG
GTCCGCCGTGCGGGGCGGATGCATCGCCGCGTTTTCTATGCTAGCCGAGG
GCAAAGACGAGGAAGAGTTGCATTTGGTTTTTGAAGTGGCTCCCGCCCGA
TATTCTCAGCACGCTTTTCGAGAGCATGTGAACGAAGTGGTACAGGCGGT
GAGGAAGAAGACAGGTTTGACTGTGTTTCGAGCTATCGCCGTTCGAGATC
GCACAATCCCCAAGACTACCTCAGGCAAAATCCGACGGCGTGCGACGAAA
GAGGCTTTGCGTACCGGTCATCTGTGGGTCTTGTACGATTCTCTCTGCCT
CTTATCTCCGGGAAAAGGGAGAGGTGCGACCACTCTAGAAAGGGCAGAAA
CTGTCTGCGCTGCTTCTCTCCCTCGGTCGTATCGTCCGCTCTTGAAAAGG
TCAACAAGCATGGGTTATTTGAGCAGCATGGCTGAGTCGATCGGTGAAAT
TTGGGACTGTCTGTTCAATGCGTTGGCTGAACATGTGGGGGCCTACGTGG
GGCTGGACACAGAATTAATCATGGGATCGTTGAGGAGAAACATAAGTGGA
TCGTCGGAGCAGTTGGATGAAAAGAGAAAGGGAGAAGGGAAGGATGGAGC
AGTCAGGAAACAGGATGGGAGCGGCATGATTGATAACGAGCCATCTTCAA
AGGATAGAATGGTACGCTGCGGTCCGACTGGTGCCGGGGAGATTGTTGTT
CCCACTTCACCTTGCCACCTGCCGTCGGGCTCATTCACGTCCTCCTGGCA
GGAGCAGGAATACTGCAAAGCGGCAAAACTCAGCGAAAAAGGGCCCGTGG
ATCGGCCGGAGCCATGCAAACAAGTTACTTATTTACCCTTTCCTGCTTTA
TCTCTCGTGTCTTCCTGGATCAATGGTGCCGCTTCTGATTTGCGGAAAGA
GCAGCCACTGTGGGCAAATGGAAGGTGGAAATTGGCAGCTGCCTCGGAAG
TGAAAGCAGGCTAAGTCCATCGAAACAGCAATACATGTGGCTAGGGAACT
CTGGAAAGCGTTAGTACAAGCAGCTGCGGAATAAATGCAAGAGGAGTGGG
GAATAGGGAGCAGGATGTGGGAAGCTACACAAAAAGATCGGAGGGGTATC
GAAATCGAGGACATGTAGGATACCTCTACAATCATGAGACAAGTAAAAGG
ACGCTGTCTGCACGAAAGAAATTTCTGCTACCATTTGAGGGCCAATACAC
CTCAAAACCCAGAATATTGCCATCCTATGGCACACCAGCGTCTTGGCCAT
GGGTCAGCAAACGTTCCGCACGCAGGAATCCAGTAACAAAGATTGTGTGA
CGACCGTCAGACACATTCCCAAAGAGACAGATGCGCGCATGACAATGTCT
CAAATCCTCGTAATTCCATTAAAGCAGAAAAATTCTTTGAACGAGTGGGC
CAGACGGGCCCCACTGGTTTTAAAAAAAACACAATTCCCACCCAAAAATG
CGAGACAGCTGTGACCATGAGGGGCTATCGACATGCACTGAGGGCCTTGG
CGTGTGAAACGTATGTTTTCTACCGTCACTGCCATCGGTTTAACTCAATA
CACATACATACTAACATGCGTGCTTCTGGGTGCTAGATGTTCGCCTGCAC
ATCTTCGCTGTAAGTTTTCCCTACTGTTTC back to topprotein sequence of rna1218 >rna1218-protein ID=rna1218-protein|Name=rna1218|organism=Nannochloropsis gaditana|type=polypeptide|length=397bp
MPGNRRSFLTTALVFVLLPYLATSFSLAAPYRMRSISTGPTRTGTVSSIS
ATSSTTSSPVDQIMGFFNTGAKGSVTNLSLGGGKKEYTVVITGASGMIGR
ALTKALQGGTIAGKSVKVVEISRRSGATSWDPATGAINAAALEGADAVVH
LAGENVGSGSSESLTGRLGAWTEQKKERILNSRRDGTALLVRTIQGLKNP
PKVFLTASAVGYYGFDEGDRVFDETGALGKGFLAEVTRVWEAEAAKLQGK
RGIRVVNARFGVVLSKEGGIIKKLLPIFQLGGGGIIGDGQQYLSWISLTD
AVRAIQFLLGASRLSGPVNVVAPEPATNAEFTAAMGKALFRPTILPFPAP
AAQLLFGEMGDEMLLGGQKAIPKKLLAAGFTFEDPDILSGVQSALKN back to topmRNA from alignment at CM002457.1:82828..84826- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1218 ID=rna1218|Name=rna1218|organism=Nannochloropsis gaditana|type=mRNA|length=1999bp|location=Sequence derived from alignment at CM002457.1:82828..84826- (Nannochloropsis gaditana)
TCCGATCACCTGACGACTCCATCTTACGCTAACCAGTTCCAACAGAATTT
CAGCATGCCTGGTAATAGACGTAGCTTTTTGACCACGGCGTTGGTCTTCG
TGCTGCTGCCATACCTCGCAACGAGCTTTTCTCTCGCAGCGCCATATCGT
ATGCGCTCAATAAGGTACGTCCATCGAAAAGCGGCGTCGAAGTGAGTCAG
AGACGTTGGTGCGCTCTTCCTGCTTGTTAACATTCTCAGTGCATTTCTCG
AAATTTTTCTTGTATACTTGGTATTTATATAGATTAAATGTTGTTGTTGT
GCGTTTCTGGGGATGTGTGGGTTTAAGGTAATCATTCATGCACGCTCATG
TATGCACGCTCACTTTTGAACCATTTCGACATAAATTATAATAGCACCGG
GCCGACGCGTACAGGTACCGTAAGTAGCATATCTGCGACCTCGTCTACCA
CCAGCAGCCCAGTCGATCAAATCATGGGTTTCTTCAACACCGGTGCGAAG
GGTAGCGTCACAAACCTCTCCCTTGGGGGCGGAAAAAAAGAATATACCGT
CGTCATTACAGGGGCCTCTGGGATGATCGGTCGCGCCCTGACCAAAGCGC
TTCAAGGTGGTACTATCGCAGGTAAATCTGTGAAAGTGGTAGAAATTTCG
CGACGTAGCGGGGCCACCTCGTGGGACCCGGCCACGGGCGCCATCAATGC
GGCCGCCCTGGAAGGCGCAGATGCTGTCGTGCACTTGGCGGGCGAGAACG
TGGGCTCTGGTTCGAGCGAGTCCTTGACTGGTCGATTGGGGGCCTGGACA
GAGCAAAAAAAGGAGCGTATCCTCAACAGTCGTCGAGATGGCACGGCCTT
ATTGGTTCGCACTATCCAAGGGTTGAAAAATCCCCCCAAAGTCTTCCTTA
CTGCCAGTGCGGTGGGGTACTATGGTTTCGACGAGGGAGACCGGGTTTTC
GATGAGACGGGAGCCTTGGGAAAGGGCTTTTTAGCCGAAGTGACACGTGT
GTGGGAAGCAGAAGCGGCTAAGCTGCAGGGAAAGCGCGGTATCCGTGTGG
TGAATGCCCGATTCGGTGTCGTATTGAGCAAGGAAGGCGGAATTATCAAG
AAACTGCTGCCTATCTTTCAGCTGGGCGGGGGAGGCATCATCGGCGACGG
CCAACAGTACCTCTCGTGGATAAGCCTCACTGATGCCGTGCGTGCCATCC
AATTTTTGTTAGGGGCATCCCGGCTGTCAGGACCTGTGAATGTGGTGGCC
CCAGAACCTGCCACGAACGCCGAGTTCACGGCGGCGATGGGCAAGGCCTT
GTTTCGACCAACGGTACGTGAGCTTAGATATCTACTTTTTCTTTCTTTTT
TTCCCTGTGGCTCAGGAGGTGGTTGACTGGACAAACGCAGCAAGATCGCT
CACATATTCCACCTTTGTTAACCTCTTCAGATTCTGCCTTTCCCTGCTCC
TGCTGCGCAACTTCTTTTCGGGGAAATGGGGGACGAGATGCTTCTTGGCG
GTCAGAAGGCCATCCCGAAGAAGTTGCTGGCGGCAGGTTTCACATTTGAG
GACCCGGACATCCTTTCAGGGGTGCAGAGCGCGTTGAAAAATTAAGGGTG
CGGCATGAAAGCATCGGGGGGTATAGAAACAGTAGGGAAAACTTACAGCG
AAGATGTGCAGGCGAACATCTAGCACCCAGAAGCACGCATGTTAGTATGT
ATGTGTATTGAGTTAAACCGATGGCAGTGACGGTAGAAAACATACGTTTC
ACACGCCAAGGCCCTCAGTGCATGTCGATAGCCCCTCATGGTCACAGCTG
TCTCGCATTTTTGGGTGGGAATTGTGTTTTTTTTAAAACCAGTGGGGCCC
GTCTGGCCCACTCGTTCAAAGAATTTTTCTGCTTTAATGGAATTACGAGG
ATTTGAGACATTGTCATGCGCGCATCTGTCTCTTTGGGAATGTGTCTGAC
GGTCGTCACACAATCTTTGTTACTGGATTCCTGCGTGCGGAACGTTTGC back to topCoding sequence (CDS) from alignment at CM002457.1:82828..84826- >rna1218 ID=rna1218|Name=rna1218|organism=Nannochloropsis gaditana|type=CDS|length=3582bp|location=Sequence derived from alignment at CM002457.1:82828..84826- (Nannochloropsis gaditana)
ATTCTGCCTTTCCCTGCTCCTGCTGCGCAACTTCTTTTCGGGGAAATGGG
GGACGAGATGCTTCTTGGCGGTCAGAAGGCCATCCCGAAGAAGTTGCTGG
CGGCAGGTTTCACATTTGAGGACCCGGACATCCTTTCAGGGGTGCAGAGC
GCGTTGAAAAATTAACACCGGGCCGACGCGTACAGGTACCGTAAGTAGCA
TATCTGCGACCTCGTCTACCACCAGCAGCCCAGTCGATCAAATCATGGGT
TTCTTCAACACCGGTGCGAAGGGTAGCGTCACAAACCTCTCCCTTGGGGG
CGGAAAAAAAGAATATACCGTCGTCATTACAGGGGCCTCTGGGATGATCG
GTCGCGCCCTGACCAAAGCGCTTCAAGGTGGTACTATCGCAGGTAAATCT
GTGAAAGTGGTAGAAATTTCGCGACGTAGCGGGGCCACCTCGTGGGACCC
GGCCACGGGCGCCATCAATGCGGCCGCCCTGGAAGGCGCAGATGCTGTCG
TGCACTTGGCGGGCGAGAACGTGGGCTCTGGTTCGAGCGAGTCCTTGACT
GGTCGATTGGGGGCCTGGACAGAGCAAAAAAAGGAGCGTATCCTCAACAG
TCGTCGAGATGGCACGGCCTTATTGGTTCGCACTATCCAAGGGTTGAAAA
ATCCCCCCAAAGTCTTCCTTACTGCCAGTGCGGTGGGGTACTATGGTTTC
GACGAGGGAGACCGGGTTTTCGATGAGACGGGAGCCTTGGGAAAGGGCTT
TTTAGCCGAAGTGACACGTGTGTGGGAAGCAGAAGCGGCTAAGCTGCAGG
GAAAGCGCGGTATCCGTGTGGTGAATGCCCGATTCGGTGTCGTATTGAGC
AAGGAAGGCGGAATTATCAAGAAACTGCTGCCTATCTTTCAGCTGGGCGG
GGGAGGCATCATCGGCGACGGCCAACAGTACCTCTCGTGGATAAGCCTCA
CTGATGCCGTGCGTGCCATCCAATTTTTGTTAGGGGCATCCCGGCTGTCA
GGACCTGTGAATGTGGTGGCCCCAGAACCTGCCACGAACGCCGAGTTCAC
GGCGGCGATGGGCAAGGCCTTGTTTCGACCAACGATGCCTGGTAATAGAC
GTAGCTTTTTGACCACGGCGTTGGTCTTCGTGCTGCTGCCATACCTCGCA
ACGAGCTTTTCTCTCGCAGCGCCATATCGTATGCGCTCAATAAGATTCTG
CCTTTCCCTGCTCCTGCTGCGCAACTTCTTTTCGGGGAAATGGGGGACGA
GATGCTTCTTGGCGGTCAGAAGGCCATCCCGAAGAAGTTGCTGGCGGCAG
GTTTCACATTTGAGGACCCGGACATCCTTTCAGGGGTGCAGAGCGCGTTG
AAAAATTAACACCGGGCCGACGCGTACAGGTACCGTAAGTAGCATATCTG
CGACCTCGTCTACCACCAGCAGCCCAGTCGATCAAATCATGGGTTTCTTC
AACACCGGTGCGAAGGGTAGCGTCACAAACCTCTCCCTTGGGGGCGGAAA
AAAAGAATATACCGTCGTCATTACAGGGGCCTCTGGGATGATCGGTCGCG
CCCTGACCAAAGCGCTTCAAGGTGGTACTATCGCAGGTAAATCTGTGAAA
GTGGTAGAAATTTCGCGACGTAGCGGGGCCACCTCGTGGGACCCGGCCAC
GGGCGCCATCAATGCGGCCGCCCTGGAAGGCGCAGATGCTGTCGTGCACT
TGGCGGGCGAGAACGTGGGCTCTGGTTCGAGCGAGTCCTTGACTGGTCGA
TTGGGGGCCTGGACAGAGCAAAAAAAGGAGCGTATCCTCAACAGTCGTCG
AGATGGCACGGCCTTATTGGTTCGCACTATCCAAGGGTTGAAAAATCCCC
CCAAAGTCTTCCTTACTGCCAGTGCGGTGGGGTACTATGGTTTCGACGAG
GGAGACCGGGTTTTCGATGAGACGGGAGCCTTGGGAAAGGGCTTTTTAGC
CGAAGTGACACGTGTGTGGGAAGCAGAAGCGGCTAAGCTGCAGGGAAAGC
GCGGTATCCGTGTGGTGAATGCCCGATTCGGTGTCGTATTGAGCAAGGAA
GGCGGAATTATCAAGAAACTGCTGCCTATCTTTCAGCTGGGCGGGGGAGG
CATCATCGGCGACGGCCAACAGTACCTCTCGTGGATAAGCCTCACTGATG
CCGTGCGTGCCATCCAATTTTTGTTAGGGGCATCCCGGCTGTCAGGACCT
GTGAATGTGGTGGCCCCAGAACCTGCCACGAACGCCGAGTTCACGGCGGC
GATGGGCAAGGCCTTGTTTCGACCAACGATGCCTGGTAATAGACGTAGCT
TTTTGACCACGGCGTTGGTCTTCGTGCTGCTGCCATACCTCGCAACGAGC
TTTTCTCTCGCAGCGCCATATCGTATGCGCTCAATAAGATTCTGCCTTTC
CCTGCTCCTGCTGCGCAACTTCTTTTCGGGGAAATGGGGGACGAGATGCT
TCTTGGCGGTCAGAAGGCCATCCCGAAGAAGTTGCTGGCGGCAGGTTTCA
CATTTGAGGACCCGGACATCCTTTCAGGGGTGCAGAGCGCGTTGAAAAAT
TAACACCGGGCCGACGCGTACAGGTACCGTAAGTAGCATATCTGCGACCT
CGTCTACCACCAGCAGCCCAGTCGATCAAATCATGGGTTTCTTCAACACC
GGTGCGAAGGGTAGCGTCACAAACCTCTCCCTTGGGGGCGGAAAAAAAGA
ATATACCGTCGTCATTACAGGGGCCTCTGGGATGATCGGTCGCGCCCTGA
CCAAAGCGCTTCAAGGTGGTACTATCGCAGGTAAATCTGTGAAAGTGGTA
GAAATTTCGCGACGTAGCGGGGCCACCTCGTGGGACCCGGCCACGGGCGC
CATCAATGCGGCCGCCCTGGAAGGCGCAGATGCTGTCGTGCACTTGGCGG
GCGAGAACGTGGGCTCTGGTTCGAGCGAGTCCTTGACTGGTCGATTGGGG
GCCTGGACAGAGCAAAAAAAGGAGCGTATCCTCAACAGTCGTCGAGATGG
CACGGCCTTATTGGTTCGCACTATCCAAGGGTTGAAAAATCCCCCCAAAG
TCTTCCTTACTGCCAGTGCGGTGGGGTACTATGGTTTCGACGAGGGAGAC
CGGGTTTTCGATGAGACGGGAGCCTTGGGAAAGGGCTTTTTAGCCGAAGT
GACACGTGTGTGGGAAGCAGAAGCGGCTAAGCTGCAGGGAAAGCGCGGTA
TCCGTGTGGTGAATGCCCGATTCGGTGTCGTATTGAGCAAGGAAGGCGGA
ATTATCAAGAAACTGCTGCCTATCTTTCAGCTGGGCGGGGGAGGCATCAT
CGGCGACGGCCAACAGTACCTCTCGTGGATAAGCCTCACTGATGCCGTGC
GTGCCATCCAATTTTTGTTAGGGGCATCCCGGCTGTCAGGACCTGTGAAT
GTGGTGGCCCCAGAACCTGCCACGAACGCCGAGTTCACGGCGGCGATGGG
CAAGGCCTTGTTTCGACCAACGATGCCTGGTAATAGACGTAGCTTTTTGA
CCACGGCGTTGGTCTTCGTGCTGCTGCCATACCTCGCAACGAGCTTTTCT
CTCGCAGCGCCATATCGTATGCGCTCAATAAG back to top
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