|
|
Properties
| Property Name | Value |
|---|
| Product | monooxygenase fad-binding protein |
| Orig transcript id | gnl|cribi|Naga_100033g45.8427.mrna |
| Orig protein id | gnl|cribi|Naga_100033g45.8427 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:314978..317924 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna119 ID=rna119|Name=rna119|organism=Nannochloropsis gaditana|type=mRNA|length=570bp
ATGAAGAATCGTAACGACAAGAAGGCCATGACCGCCGGTAATGGCAAGAC
AGCAATGCCTGGCTGCGAGGTATGTTGTGTTGCCGACAATCAGGGAAAAT
ACAAATGTCCAAATTGCCTCCTCCGCTATTGCAGCGTTTCCTGTTATCGA
GAGCACAAGAATGCGCCGTGTGAAAAGAAGGAGCCTGCGTCCACGGCCGC
GCACGGAAGAAAGCGGGCCCGTGAAAGCACGAGGGACGACTTCTTCCCTG
TCCCCTCGTCCATTGCACGGAAGCATCACAGCGATTTGGCCGCAACACAG
GCCGTCGACGACCAGGAAGAGGAAGAGGACGACGGGGCATTGCTAACGGA
TGACATGCGGAAGGCGTTGATGGGCAGTAAGTGGTTGCAGGGTGCTCTGG
AAGACTCCACTTTGTGTAGTCTCTTGACGGATATCGACAGCGATAGGCAC
CGGGCGCAGAGACTGAGCGAGGAGTTGAACAAGTATCCTGAACTGAAATC
CTTCGTGGACCGGGTGCTGCTGGAAATAGGTGCATTGAAGTACGAGGAGG
GTCATCTGGTACTCACGTGA back to topprotein sequence of rna119 >rna119-protein ID=rna119-protein|Name=rna119|organism=Nannochloropsis gaditana|type=polypeptide|length=690bp
MFHRNSNRFGRLRSSGSAAAADTATEEHEIASASEKVTILVCGAGPVGLT
ATLECARHGLQVKIIDKSLTKDPHSKAFGIHALTMEKFLAMGVAPAVLEQ
AHCVDRLRIRGDFTTVVEDFCHIPSRFKGVFMLSQRKLEDILEAHIHMYG
IEVERGVELLDFVQAEDQSDASGTPSVGKGPMTANLRDVKTGEERNLTCK
YVIGCDGCHSRVRKLLKLPFLGAPYEEDFLLLDVHFSVKPGQRFQGSSVL
LGDPVIALFELDCGLLRFISKRCAGDGIPASQDDKRIADVENAAVEAAIL
KRFQDLVLSRCPELAGLHDVKWASIFRIHRRVVPQYNVGHVFLAGDAAHI
HSPLGGQGLNTGIHDAVNLAWKLGAVERLGADPGILLPSYNAERHPVGEQ
TLAWTDSLTSYTMTRGFLSGVAQKVLFPIASPLLNRSTWAMKAITSRMSM
LSLSYRGTPSPLLPSAALPASSLPPIGSPQPGDRVPDGPLVRFSSGAATG
LLEVVCRGLDHTLLMFGEPEGMEGLEGVEDGLTVEKAVRSKLDPEVEAWR
RLRDMVSFVHISRRFRSASKSVTKVDARGSSSRSHPRSSDQGSNGGAQVR
ERSDPIDKKSSGGRHQVRQPVALTSMYDESGRVSEAFGLNTSGQSGSRGN
PACLFLVRPDGYVGWRAGDWDLGGLLTYLEPLYPRGLCDL back to topmRNA from alignment at CM002455.1:314978..317924+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna119 ID=rna119|Name=rna119|organism=Nannochloropsis gaditana|type=mRNA|length=2947bp|location=Sequence derived from alignment at CM002455.1:314978..317924+ (Nannochloropsis gaditana)
GTAAGGATTGTGAGCGCGACAACGGGAAGAATAcaaggggaggcaggaag
tCATGCCTACGAAATCGAGCCAGGATACTACTTGAAGCAACACGACTGCT
ATGCCCGTTCGGACAATTGACTATGTCACAGAGTGTCTGTCTGAGCCTAC
CAGCACTCGAGCTCTACGACAAACAAGACTTGCTCATTTTTTACAAGCTT
GTAGCGCATTAATTATTGAACAAATGCCAAGGAGCTAAGAAAATAGTGGA
AAATTGAGTCAAGGCTCCAGGCGCGTAAACCAGACGGAACAAGGAGAGAC
AACTCAACCGCAACAAGAGGAacgagaggaaaggcagTGTGGTGAACAAA
CATGCCTGCATTTGTACTACAAGAAGCATTACCAAAAAGGACAATTTGAC
CCTCAGATTCCCACTATCAACCGAACTATTCACAATGTACGTGCAGGACA
CGTCGAATATAGCAGGATCGGCGTCCGCAGATACCGCAGTCACGCATGTT
CCATCGGAACAGTAATCGGTTTGGTAGATTGCGCTCTTCCGGCAGTGCTG
CCGCAGCCGACACAGCCACGGAGGAGCATGAAATTGCTTCCGCCTCGGAA
AAAGTGACGATTTTGGTATGCGGTGCTGGTCCCGTGGGGCTGACGGCGAC
GCTTGAATGTGCACGGCACGGGCTGCAGGTCAAAATAATTGATAAATCCT
TGACGAAAGATCCCCACAGCAAAGCTTTTGGCATTCATGCATTGACGATG
GAGAAATTTCTTGCCATGGGTGTTGCTCCTGCCGTCCTGGAACAAGCCCA
TTGCGTCGACCGCCTGCGGATCCGAGGGGACTTTACGACCGTCGTGGAGG
ATTTTTGCCACATACCTTCTCGATTCAAGGGCGTCTTCATGCTGTCCCAA
CGAAAATTAGAGGACATTCTTGAGGCCCACATACACATGTATGGAATTGA
GGTGGAACGCGGCGTGGAGCTTCTCGATTTTGTCCAAGCAGAAGACCAAA
GTGATGCCTCAGGCACCCCCAGCGTCGGCAAAGGACCTATGACAGCCAAT
TTGCGGGACGTaaagacgggggaggaacgcAACCTCACGTGCAAGTACGT
GATAGGCTGCGATGGATGCCACAGCCGCGTCCGGAAGCTCCTCAAACTGC
CCTTCCTTGGCGCCCCCTATGAGGAAGATTTCCTCTTGCTCGACGTGCAT
TTCAGCGTGAAACCCGGCCAGCGGTTTCAGGGCTCCTCAGTGCTCTTAGG
GGACCCGGTGATCGCCTTATTTGAGCTGGACTGCGGCTTGTTGCGCTTCA
TATCCAAGCGCTGCGCCGGGGACGGTATCCCCGCCAGCCAGGATGACAAG
CGCATCGCCGACGTGGAAAACGCGGCCGTGGAAGCCGCCATCCTGAAGCG
CTTCCAAGACCTCGTCCTGAGCCGATGTCCTGAGCTCGCCGGCCTTCACG
ATGTAAAGTGGGCGAGCATATTCCGCATTCACCGTCGCGTGGTGCCGCAG
TATAATGTCGGGCACGTCTTCTTGGCGGGAGACGCGGCGCACATCCATTC
CCCCCTGGGCGGGCAGGGATTGAACACGGGTATACACGATGCGGTGAATT
TGGCCTGGAAattgggggcggtggaacgTCTGGGTGCCGATCCGggcatc
cttcttccctcctacaACGCGGAACGACACCCAGTTGGAGAGCAAACCTT
GGCGTGGACGGATTCCTTGACCAGCTACACGATGACGCGGGGTTTCTTGT
CCGGGGTAGCCCAGAAAGTTCTCTTCCCTATTGCCAGCCCCCTCTTGAAC
CGCTCCACCTGGGCGATGAAGGCCATCACCTCCAGGATGAGCATGCTCAG
TCTCTCCTACCGaggcacgccctcccccctcctcccctccgccgccttgc
cTGCGTCGAGCTTGCCCCCAATAGGGAGTCCCCAGCCTGGGGACCGGGTG
CCGGATGGACCTCTGGtccgcttttcctccggTGCGGCCACGGGTCTACT
CGAGGTTGTCTGTCGCGGCCTGGACCACACCCTTCTTATGTTCGGGGAGc
cggaggggatggagggcttGGAAGGGGTCGAGGACGGGCTGACGGTGGAG
AAAGCCGTCAGATCGAAGCTGGATCCGGAGGTGGAAgcttggcggcggct
gcgAGACATGGTCAGCTTTGTGCACATTTCCCGCCGCTTCAGAAGCGCTT
CCAAGTCCGTGACCAAGGTCGATGCCCGGGGTAGCTCAAGCCGATCCCAC
CCGAGATCCAGTGACCAGGGGTCAAACGGCGGTGCTCAGGTGCGCGAACG
CTCTGATCCTATAGACAAGAAGTCTTCGGGCGGTCGCCACCAGGTCCGCC
AGCCCGTTGCCCTCACCTCCATGTACGACGAGTCGGGACGCGTCAGCGAG
GCGTTTGGGCTGAACACCTCAGGACAGTCAGGGTCCCGCGGCAACCccgc
ctgccttttccttgtTCGCCCCGATGGCTACGTGGGCTGGCGGGCAGGGG
ATTGGGATCTGGGCGGGCTGCTCACGTACTTGGAGCCGCTGTACCCTAGG
GGACTATGTGACCTCTGAGGTTCACGAACTCAGATAATTGGATCGTGGAG
GCTGGTAAGGCACTATCTACATTTTGAACAAATGCGAGGACCTGATTtaa
aaaaggagagggaggcctcaGGCGTGGGTCGACATGAAAGGGAAATTGCA
GACATCTGGTAAAATACAAGCACCCGTAAATGGAAGGTACTCCAGACCGC
GGAACCGGGAAATGACACAAAAATAAATCGCAGCATTCGATGGCTTGTCT
GCAGCATCGTCTTATTTTTACACGACTCGTTACTCTTATATCGCTTTTGC
ACGGTCAGTGCTTGGCACCCCTGAAATTGCTTTTCAGGATGTAGAATCCT
TGCAGGCACAAGCTTCTTTTCAAGCAAAATAAATTCATCTTTCAACA back to topCoding sequence (CDS) from alignment at CM002455.1:314978..317924+ >rna119 ID=rna119|Name=rna119|organism=Nannochloropsis gaditana|type=CDS|length=2073bp|location=Sequence derived from alignment at CM002455.1:314978..317924+ (Nannochloropsis gaditana)
ATGTTCCATCGGAACAGTAATCGGTTTGGTAGATTGCGCTCTTCCGGCAG
TGCTGCCGCAGCCGACACAGCCACGGAGGAGCATGAAATTGCTTCCGCCT
CGGAAAAAGTGACGATTTTGGTATGCGGTGCTGGTCCCGTGGGGCTGACG
GCGACGCTTGAATGTGCACGGCACGGGCTGCAGGTCAAAATAATTGATAA
ATCCTTGACGAAAGATCCCCACAGCAAAGCTTTTGGCATTCATGCATTGA
CGATGGAGAAATTTCTTGCCATGGGTGTTGCTCCTGCCGTCCTGGAACAA
GCCCATTGCGTCGACCGCCTGCGGATCCGAGGGGACTTTACGACCGTCGT
GGAGGATTTTTGCCACATACCTTCTCGATTCAAGGGCGTCTTCATGCTGT
CCCAACGAAAATTAGAGGACATTCTTGAGGCCCACATACACATGTATGGA
ATTGAGGTGGAACGCGGCGTGGAGCTTCTCGATTTTGTCCAAGCAGAAGA
CCAAAGTGATGCCTCAGGCACCCCCAGCGTCGGCAAAGGACCTATGACAG
CCAATTTGCGGGACGTaaagacgggggaggaacgcAACCTCACGTGCAAG
TACGTGATAGGCTGCGATGGATGCCACAGCCGCGTCCGGAAGCTCCTCAA
ACTGCCCTTCCTTGGCGCCCCCTATGAGGAAGATTTCCTCTTGCTCGACG
TGCATTTCAGCGTGAAACCCGGCCAGCGGTTTCAGGGCTCCTCAGTGCTC
TTAGGGGACCCGGTGATCGCCTTATTTGAGCTGGACTGCGGCTTGTTGCG
CTTCATATCCAAGCGCTGCGCCGGGGACGGTATCCCCGCCAGCCAGGATG
ACAAGCGCATCGCCGACGTGGAAAACGCGGCCGTGGAAGCCGCCATCCTG
AAGCGCTTCCAAGACCTCGTCCTGAGCCGATGTCCTGAGCTCGCCGGCCT
TCACGATGTAAAGTGGGCGAGCATATTCCGCATTCACCGTCGCGTGGTGC
CGCAGTATAATGTCGGGCACGTCTTCTTGGCGGGAGACGCGGCGCACATC
CATTCCCCCCTGGGCGGGCAGGGATTGAACACGGGTATACACGATGCGGT
GAATTTGGCCTGGAAattgggggcggtggaacgTCTGGGTGCCGATCCGg
gcatccttcttccctcctacaACGCGGAACGACACCCAGTTGGAGAGCAA
ACCTTGGCGTGGACGGATTCCTTGACCAGCTACACGATGACGCGGGGTTT
CTTGTCCGGGGTAGCCCAGAAAGTTCTCTTCCCTATTGCCAGCCCCCTCT
TGAACCGCTCCACCTGGGCGATGAAGGCCATCACCTCCAGGATGAGCATG
CTCAGTCTCTCCTACCGaggcacgccctcccccctcctcccctccgccgc
cttgccTGCGTCGAGCTTGCCCCCAATAGGGAGTCCCCAGCCTGGGGACC
GGGTGCCGGATGGACCTCTGGtccgcttttcctccggTGCGGCCACGGGT
CTACTCGAGGTTGTCTGTCGCGGCCTGGACCACACCCTTCTTATGTTCGG
GGAGccggaggggatggagggcttGGAAGGGGTCGAGGACGGGCTGACGG
TGGAGAAAGCCGTCAGATCGAAGCTGGATCCGGAGGTGGAAgcttggcgg
cggctgcgAGACATGGTCAGCTTTGTGCACATTTCCCGCCGCTTCAGAAG
CGCTTCCAAGTCCGTGACCAAGGTCGATGCCCGGGGTAGCTCAAGCCGAT
CCCACCCGAGATCCAGTGACCAGGGGTCAAACGGCGGTGCTCAGGTGCGC
GAACGCTCTGATCCTATAGACAAGAAGTCTTCGGGCGGTCGCCACCAGGT
CCGCCAGCCCGTTGCCCTCACCTCCATGTACGACGAGTCGGGACGCGTCA
GCGAGGCGTTTGGGCTGAACACCTCAGGACAGTCAGGGTCCCGCGGCAAC
CccgcctgccttttccttgtTCGCCCCGATGGCTACGTGGGCTGGCGGGC
AGGGGATTGGGATCTGGGCGGGCTGCTCACGTACTTGGAGCCGCTGTACC
CTAGGGGACTATGTGACCTCTGA back to top
|