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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101322g1.364.mrna |
| Orig protein id | gnl|cribi|Naga_101322g1.364 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:1430418..1431625 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1185 ID=rna1185|Name=rna1185|organism=Nannochloropsis gaditana|type=mRNA|length=4839bp
CGCCACACAGGGCGGGATCTAAAGGTTGGTGCCCCCGGACGGCCGTCAGG
GTGAAGTCGAAAAAGCGCCGTCTCGGAATGGATTTGTGATAAGAACCGCC
TGTACTAGCGTCCACATCTCGACTGTGCACCATTTTTGATCGTCGACTGT
TAGGCGTGTGATCGCACGTGACTGGGAGCCGCGCGAGGCGTGAGGGAAAT
CAGGCTTTTGATGCAACAGACTGAAAGGGCAGAGTGAGGCACATTTTTCA
TGGATTCGAACGCGCAAACCACCAGTGGCACCGTCGTTGAAAGCACGGCT
AGCAATGGAGAGGCTTCTGCGCCCGCGCCCATGCTTTCGTCCTCCCTTCC
TTCTCCAAGCTTTGAGTCCGGCCCAGACCCCCCCCCCCAGTTAGCAAGGC
GGGTCCCCGGGAACGTGCCGCTTGACCCCTCGGCCGCCGACGTGGACGAC
AAGGACCGCGCCTCCAGCGCCTACGGAGACGAACCTCCCCTCCCCCTCCC
CCTCCTCACGTCCACCTCGATGACAGCCTCAGAAGCGAGCAGCGGTCAAG
GAGGGGAAGCTGGGGCCGCCCCAGGGGTGCCCTCCCTTGCTTCCTCCCCT
GCCTTCGCCCCCGCAGCTACCGGCCTGTCCCCGTCTCACTCCGCCGGTTC
CGGCATGTCAGTGCTGATCCAAGTGCCTCAAAACGGGCCCAGCGAGGCTC
TGTCGCCTTTGCCCTTGCCGACCACTGCCTTGGACACTCCCTTGGACACC
CGGTCGTCCACCCCCCGCCCCGCGCCCGCCCCAGCCCCGCCTTCTCCTTA
CCAGACTGTTGGAGGCCTCCACGGCGGGGAGCACTCGTTCCTTCCTCCCG
TCAGTACGGAAGGGCTGGCCCCTCCGGCGATGGGCGCGGGGGAAGGAGGG
CTTGAGGGCGGGGATGGAGGGTCGGGAGGTTTCTACCCCCCCCTTGCCCA
GTCGCAGACGCAACTCGCGCCGTTGCCGGGCCCACCGCCTCCGCAGGCGC
AAGATTCGCTGCAGTACAAGCCTGGTTCGGTACCGGAGCCGACTAGGATG
ATGGAAGGGTCCAGTGATCCTCCATTTCATTCGTCGGAGACGCCCAGGGC
GATGGGGATCGGCCGGGGGGGAGGGACGTCGCAGATGGTTGCACCTGCCC
CCGCGCCATCGTTGCAACAGTCGGCGCCGTTGCAACAACGTCAGCAATTG
CAACCTCAGCAGCACCAACAGTTCCATTCGCGCTCCCACCCACAAGTAGC
GCCACTCCAGGTGCAGCAACGGCAGCAACCGCGGGCACTGGTGCCAGGGC
CCCAGCAGCAGCAGCAGCATCAGCAGCAGCAAGCTCTCTATGCATCTTCG
CAACAGCAGCAGCAGCAACAGCAGCAGCAGCAACAGCAGCAACAGCAGCA
GCAGCAGCAACAGCAGCAGCAGCAACAGCAGCAGAGACATCACCCGCACC
CACAGCAACTGCAGCAACAACAGCGACACAACCAGCAGCAGCCACTCCAG
CATCCACAAGCACAGCATCGAGTCCCACCCCAGGGCATGCCTCAGCACCA
GCACGTCCGGGCGCCACAGCAACAGCGGCAGCACCAACTCCTCCCTCTTC
CAACCGCGGGCAATGCCGTCCCAGGCGGGCAGGCAACCGGCACCCCGCAC
GCGTCGCAACTGTCTCACGCCCAGCTCTCCCAACAACAACAACCCGCGCA
TTCCTTGCCCCAACGGCAGGGCCTGGGCGCGCAGCCCCTCAACCCACAGG
ACACTGCCTTGCGGCCCGGAATGGTCAAGAACATCATGGTCTTGCTCCAA
CAACGCAAACCCGCTGCCGATCCTTCCAAACCCTTGGTCGAAACTCGGTT
GAAGGAGATGGCGATCCGGCTGGAGGACTACCTGTGGAAACGCTCGTCCA
CGCTGGCGGAGTACTCGGATCTGAGCACCCTCAAACACCGCCTGCAGTGT
TTGGCAGTCTACATGGGCAAGCACCAGCAGCGGAGTCAAACTGTACCGGC
GGGCGCAGGGGGCAGAGGGGGAGGGATGCCGAATCAAGCGCCCCAGCCAC
AGGGGGGGGGGCTCTCTGGGAACACGAACCAACTGCAACGTTTGGTGCCT
ACCGCCAATGCCAGCAATATTCACCTGCCCAACCCTCATCCCGGAGGTCT
TTCGGGTGGGATGGGGGCGGGCGGCGCGCGTGTGGGAGGGCGGGGCAGTG
GGATCGGCGGAGGGGGGTTGATCATGCAACCTGGGAGTGCCATCCACGGA
CATCCCCCCGGGCCCCAGTTGCGGGGCAGCTCTCTCCCCCACCAAGGGCA
AGTGCAACCGACCTCGCAGCAGGGAAGTCAGCAAAGAAGGGTGGGAACGG
GTCTGGCGCCTGCGCCTGGCACACAACCCGCGTTTTTACCACAGGAACAA
ACGCAAATGCAAGGTCGGCGGGTAGGGGGGGGAGGGATGCTGCCCGTAAA
TGGGGGTAACAGCCACCCTCCTCCCGCGCCAGGTCCTCCACAAGGCCATC
TGCAGCCGCCGCAGCAGTCATCAGGACAGGGGCAAGCCGCTCCCTTGAAC
GTGATGGGGGGGGCACAGCAAGTGGGGGGGGGCGGTAATGCGAACCGAGG
GCTCCCTATGCCTTTATCTTCAGGCCCCGGGGGTACCGCCTCCGCCAGTC
AGAAGAAACGCGTCCAGCACACGCCCGAACAACGTCAGCAAATCTTGCAC
CAGCAGCAGCAGCGGCTGCTTTACTTGCGCCATGCGTCCAAGTGCATTCA
TGTGGACGGCCGCTGTCCCCAGGGGTACCCGAACTGCATCGGGATGAAGG
AGCTTTGGAAGCACATCGCCTCCTGTAGGGAACAACGGTGCAAGTTCCCC
CACTGCGTTTCCTCGAGATACGTCCTGTCCCACTACCACAAATGCAAGGA
CACGCAGTGCCCGGTGTGTGGACCCGTACGAAACACGATCCGATCTTCTC
GCTCCTCGGCGCATCCCATGCCGCAACTTGGTCAGGGTGTGGCAGACGCC
GACGGAGGAGGCGAGGGGGGCGGATCTGGAGCCCAGCAGCAGCAGCAGCA
GCAGCAACAACAACAACAACAACAACAACAACAACAACAGCAATTGGTAG
CACAGAGTAATCAACGCACGCAGCAGCAACAAATGTTGATCGCCCAGCAG
CCCCCCCCCGCAGGGATGGGGGGAGGGAGGGTCGGAGGCATGACTGGGGC
CCTGGCGAATGGAGGCAGGGGTGGGAGGGTCGGAGGGAGGGCGCGGGGCA
GGGGGGGTCAAGTCGTGCTTCCTCAGCAGGTTGCGGCCGGGGGGCGGGGA
ATAGGCGGTCAGAATGTAGGTGGAAGTGGAATGAACCAGCAACAACAATT
GCAGCAACAGCAACAACAGCAGCAGCAGCAACAACAACAACAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAACGCCCACAAAATATGGCTTCCGTG
CCGGTTCCTGGGGTAGGACGCGGGGGAGGAGGGGTGCGAGCCGGCGGGGA
AGCCCTCGCCTTGGGCACTGCGGGTGGAGCGGGCAGCAAACCTGGGGCCC
GGAGCGGTTCGGGGAAAATGCCAGTCGTAGCCAAGACTCCGAATGGCCTC
ATGATCCAGACGGAAACGCATGGATGGGTGCCGGTAGAGCCCACGAAAAA
CGGCGGCTACCGTCCCCTGGTGCCTCTGCCCGGCTCCGGTCAAAGCTTCT
CACAGGCTGCCGGCGGGGCTGGCGCGGGCGGACGTCCTGGCGGCGTTGGG
AGAGGGGTGCCCGGCGTACCTGCCCCACCTTCCGCGGCGGCGTTGCAGCG
GTTCGAAGACTCCGTGTCCTTGGTGAACTCCTTCACGGACGCACAAATTA
AGGCGCACATGGCCTCTCTGCGTTCAGGGGGAGGGTTTTGGACTCCCGCC
AAGTTGAAACTTAAGGTTCTCCCCCTCGTGGTAAAACAGCTGAAATCGGA
GTATGGATGGATTTTTGAAGAACCCGTGGACCCCGTGAAGCTCGGGCTCC
CGGATTACTTCGATGTGATCAAGCACCCTATGGATTTGGGCACTGTGAAG
CGTCGTTTGGAAAACGGCTCCTACACAGAGCTGGAAAAGGTGGCGGTGGA
CGTGAAGCTCACCTTCGACAATGCCATCCTTTACAACCCCCCGGGGCAAG
AAATCCACAAGATGGCCAAGGACATGCGGGACAGTTTCTTCAAGGACTTC
AGGCAGCTGGAGGAGGAGGTTAAGAGGGAACAGCAGCTGACTGTCAACAG
GGGGGAGTCTTGCCTACTATGTGGCTGCGAGAAACTCTATTTTGAGCCGC
CTGTCTACTATTGTAACGGATCATGCAACAGCAGTCGCATACGTCGAGGC
TCCTATTTCTACAGCGGCGGGCGGAACCAGTACCATTGGTGTGTCCCCTG
CTACCAGGAAATCAAAGGAGAGGAGATCCATATCGGCGGGACCGTGCTGA
AGAAAAGCGAGCTCATCAAGGATAAGAACGACAAGCTTCGGGAGGAATTT
TGGGTCGGCTGCGATTCGTGCTCCCAGTGGGTGCACCAAGTCTGCGCACT
CTACAACGGGCGGAACGATCAAGGCGAGCAAGTCAAGTACTATTGCCCTC
CCTGTACCCTGAAACGTCGAAAGAGCATGCCGAACGGGGGAATTCCCTCC
ACGCCTCCCCTGTCCGCCAAGTTTATCAAGCATAACAAATTCTCGGCCTT
CATCGAGAAGAGAGTGCATGCCAGGTACAAGGAGTGCTATGAGGGGCGGG
TCAGGGACGCCAAGAAGGAGCAACGCCACAAGATCGTGGAAGAAATGGAG
CGCAACGCCGTCTACATTCGGCAAGGAGACGAAGGGTAG back to topprotein sequence of rna1185 >rna1185-protein ID=rna1185-protein|Name=rna1185|organism=Nannochloropsis gaditana|type=polypeptide|length=220bp
MPATRNGATGSQVTRRSKTRHTPADGTTPAADEVQEMQDPPSAPKSPVRR
ARAGGGKGRGAPTVVEEGASQTKETAPNDPASPSKKTRAKGASRQAARNG
EAAEMGRGEEDARQAPPEVEGPVGGSPSRKKRSVKDISFPPTEEEGDDRE
EGGEGGAEGGLPWAESEQRQQKRTKHAAVTREEETIAGLNTGVFPEVMGA
EEYQAPFPTREAVLEGTPVE back to topmRNA from alignment at CM002456.1:1430418..1431625- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1185 ID=rna1185|Name=rna1185|organism=Nannochloropsis gaditana|type=mRNA|length=1208bp|location=Sequence derived from alignment at CM002456.1:1430418..1431625- (Nannochloropsis gaditana)
AACCACCGCAGGATGATCAGAAATGCCTGTCTCGACCATCCACAAGCACT
ACCCACCCACATGCCCACGATTTTCCGCTGGCTTATGGAGGGCACCGGTT
AGAAATTCGCCCATGGTGCACATCAGCTTGAAAGTGGGATGATTTTACGT
TCATATGTCCTTTCCAGAGACCAGCTTGCATTTTGAATGAGGTTCCCCTC
CGAGGAAGACGCCGCCATTCCCTCCCTCACTGTTTTATCACTTTTCTTTC
CTTTGACGCCACCCCGTCTAGCTTAGGACAGGTGGGTGACACTGGCCAAG
AATACGGTGAGTGCTTAACAATTATGGAGAGTTTTAGTTTGTTTGAACGC
GTGGTGGATGACAGAGGTCCTTCTACCCATAAACCTACGCTCGGCTGCTG
GTGTGGGATACTTGGGGTTGGGAGCGTTTTCAAGCTTGCTAGCTCCGCGA
CGCGTGTAGAGACTTTGCCATGGCATTTTGACAGTATTTTTGAGGCTTCT
GTTTCTGTTTTTTTCCTGTCCCCCCGCTCTGCAGCACAACTTTGAGCATG
CCCGCGACACGGAATGGGGCTACGGGCAGCCAAGTGACACGCCGGTCAAA
GACACGTCACACTCCGGCCGATGGAACAACGCCTGCAGCGGATGAGGTAC
AGGAAATGCAGGACCCTCCCTCGGCGCCCAAATCCCCCGTGCGAAGGGCC
CGTGCGGGGGGAGGAAAAGGCCGGGGCGCGCCGACGGTGGTGGAGGAGGG
AGCAAGCCAGACAAAGGAAACGGCACCGAACGATCCCGCGTCCCCTTCCA
AGAAGACAAGGGCGAAGGGTGCTTCACGCCAAGCGGCAAGAAACGGGGAG
GCGGCGGAGATGGGACGGGGAGAGGAGGATGCTAGGCAGGCACCTCCGGA
GGTGGAGGGACCAGTGGGGGGCTCGCCGTCGCGGAAAAAACGGAGCGTGA
AGGACATCAGCTTCCCGCCCACAGAAGAAGAAGGCGACGACCGGGAGGAA
GGGGGAGAAGGCGGGGCGGAGGGAGGGTTGCCCTGGGCCGAATCGGAACA
ACGGCAGCAGAAACGGACAAAACACGCAGCCGTTACTCGGGAGGAGGAAA
CGATCGCGGGGTTGAACACCGGTGTATTCCCGGAAGTGATGGGGGCGGAG
GAGTACCAGGCGCCCTTCCCCACGCGCGAGGCAGTGTTGGAAGGCACCCC
GGTGGAGG back to topCoding sequence (CDS) from alignment at CM002456.1:1430418..1431625- >rna1185 ID=rna1185|Name=rna1185|organism=Nannochloropsis gaditana|type=CDS|length=661bp|location=Sequence derived from alignment at CM002456.1:1430418..1431625- (Nannochloropsis gaditana)
ATGCCCGCGACACGGAATGGGGCTACGGGCAGCCAAGTGACACGCCGGTC
AAAGACACGTCACACTCCGGCCGATGGAACAACGCCTGCAGCGGATGAGG
TACAGGAAATGCAGGACCCTCCCTCGGCGCCCAAATCCCCCGTGCGAAGG
GCCCGTGCGGGGGGAGGAAAAGGCCGGGGCGCGCCGACGGTGGTGGAGGA
GGGAGCAAGCCAGACAAAGGAAACGGCACCGAACGATCCCGCGTCCCCTT
CCAAGAAGACAAGGGCGAAGGGTGCTTCACGCCAAGCGGCAAGAAACGGG
GAGGCGGCGGAGATGGGACGGGGAGAGGAGGATGCTAGGCAGGCACCTCC
GGAGGTGGAGGGACCAGTGGGGGGCTCGCCGTCGCGGAAAAAACGGAGCG
TGAAGGACATCAGCTTCCCGCCCACAGAAGAAGAAGGCGACGACCGGGAG
GAAGGGGGAGAAGGCGGGGCGGAGGGAGGGTTGCCCTGGGCCGAATCGGA
ACAACGGCAGCAGAAACGGACAAAACACGCAGCCGTTACTCGGGAGGAGG
AAACGATCGCGGGGTTGAACACCGGTGTATTCCCGGAAGTGATGGGGGCG
GAGGAGTACCAGGCGCCCTTCCCCACGCGCGAGGCAGTGTTGGAAGGCAC
CCCGGTGGAGG back to top
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