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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100006g6.8663.mrna |
| Orig protein id | gnl|cribi|Naga_100006g6.8663 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:1358281..1358637 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1160 ID=rna1160|Name=rna1160|organism=Nannochloropsis gaditana|type=mRNA|length=2677bp
TCACAGGAACCATCTGAAATACCCGTACAAAGCTCATAGAATGACTGCTT
CAGAAGAACTTTCTCTCCGATACTATGAAGTGTGTTGCATGCTTCTCCAA
CGATGGCGGTACTCCACTCAAAACAACCGGGAGGATATGAATGATGCCTG
TATCGAGAGCGGTGCATCCTACGACGAATTGCGCTCCATTCTCAAGCACC
TCCGTGCCAAGTACATGGCTGGTTTCAACAATGCCCAGAAGCAAGGTCGA
TTTATCGACGATTTCTACGGCTACTACACTTCTACCAAGCGGCCTCGGGG
ACGGCCTCCGACCGCAGCGGGTGGGACTGGAAACGGGGTGAAACTGCCGT
CGAGCAACATCCGTGCCCAGCAACCGTCGCAGCCTGCCTCCTCAGACATG
GTCACTGGAGCCGGAGATTTGATGGTCGAGAGCGACAGCCAAAGCAGCAA
TGACGGAAATGCTCCTGTGGGTGGCACAGGGCGTTTGAGGATGCCTTCAG
CCCGGGCCCGCAAAGCCACAGCACCCTATGAGGCCCCTCTGGCCAGCACG
CACAGCCGCTCTTCCTCGTCCTCCTCGGCCTCATCCACCTCTTCGAGTCG
CTCTCGGAAAGCAAGCAAAAGCCAACCGCTCGCCAAACGCTACCGGCACG
GGAGCAGTGAGATGGTCGGCTACGTCGGGCCGGAAGGAAATGATTACGAC
AACCTGCAGGCGTACCAAGAGAAAGCAGGAAGGAACCAAGCAGAGTTCGA
GAGAATAGATGTCGGGGGCTCCACACGGTGCCGGATGGAGGGGAAAGCAG
GGGAAGAATTGGAGGATGAGGATGCGGTTGTGGTTATGTTGGCACCCACT
GGGCAGCATGAACGGCAAAGTTCGCTTTTCGATTTGGTGACGGCCGTCGA
AGAAGCCTCCGGGAAAACCGATGGTAACCCCGTCGCAAAAAGTCGGGCCA
TTAGCCCTGCTCTGGATGATCACGGGCTCCTCCTACTCGGCCTGAAGGCA
CACCCCGTCACATTCTCACACGCCAAAACTTCTCCATCCACGACGGCGGG
CACAAATTCCGCGAAATCTTTGCTGGAGACGCAGTCCAAGCAAGAAGCGA
CGCCCAGCGAACGCACCAGCTGCAACAACAGCGTCGGCAGCTCGGGGGAA
ACCAGCTTGACCAAAGTGCCCCCATCCTCCTCCTCGTTGCAATCCGCCCT
GGGCGGGAAAGCTTTGGAAGGTCGCGTCTCCGCATCTTTCCATACACAGC
CAGCCAAGACAAGCAGTATCTACCCGGGCCACCCCCTACCCCCGCAGCTG
GCCAACATGCCTCCTCGCCTGCCCTACCCCCCTGTGACTTTTCAAGGGCA
TGCCTCCCATCCTCAATACTACCATCCGCACCACTACTTCCACAACTTGA
GTACCCCTTATAATCAGCAGCCTCAGCAGTCTGTAGCCTACTATAATCAG
TACCCTCCCCAGAAGCATGAGCGTAAAACCTCAGAAGAACAGCCCGCCTA
CTGCCCACAACCGCATCAGCAGAACAGCAGCAGTCAAGCAGACTTGCTGC
ATGCGTCCTACTCCTCCACCATGAGCACGCATTCTTTGCCGGCCATGTCA
GGGCACGCAGTTGTCGACGTGGTCGGCCCTGCGGACACCCCTACGGCCCT
CTCTGGTACGAAAATAGGCACGTGCAAGACCGTCGGCAGCAACAGGGGGC
AAGGGCAGGAACACCACTCGCGAAGAGAGGGTACAGACCGCACGGCCCAA
CACATTGTAGGCAGCATGGTGCGCGACATGAGCGGAGCTGCCCCTGCTGC
GACTGTCTCTTACTAATCGTCAAACCTGAGGATGCTGCCGCATTCTACTG
TCACCTGCTTTACCATAAAATCCCGCAAGTTCAAGAAGAGAAACGGAGGA
AGGATGTTAACAGGATGTAGGGTATTTTTTAGAAACTTTGGGGATGTCAT
CTTTGACATGCTGTCGACCTGTCAGATCACGCACTCACGCACATCTACTC
ATAGCAAATTTGACGAAGTACGTACGTCTGAATAGAGATTCAAAGGTACA
TGCTACCAAACCCGTCGCAATTTTTACGCGCGTGCTTATCTATTCATGAA
TATATCTATAAAAATATATACATGTATATCCATTTATAGAGAGGTAGATG
TGTGTCCCAGTATGTGTACATACATGTTTCGACATGTTTGTACACATTCT
CTCTTATATCTTATACGGTGCTTGCGGCTATGTCCGTGCGCGTTGTCGCC
CGGTATTGATCGGTCTTCTCTATCTGTGACAAGATTTTCCTATTGTTATT
TTTGTCGGATGTGTCCGTCAAAAGAAATGATAAAGGTGTCGAAAGGACTG
ATGGGACCTTTTTTTGGATTGTCTTTCTCTGACCAGTGAGGGATCTAGGC
GTTGCGGACGCGCAGTCAATTGATGCAAACAACATAAACAAAAGTCATGG
ATGCATTTCACAGATATCATTGAATAATTAATGCTGAGGAAAAAGAAATT
GAGACCCGAAATCTTGGTCTGTGCATAACAAAAGTAAAATTGTCTTAGTG
CACTGACAAAGGTTGGCGGGCATGTTGTCCGACCAAAGCGAAGAGTTAAT
GCTATTGAATACAACCATATAGGAAGAGGGGAAAAGCCAGGTTTAAACAA
AGAGGAAAAAGTCCTTGCAACCTCAGC back to topprotein sequence of rna1160 >rna1160-protein ID=rna1160-protein|Name=rna1160|organism=Nannochloropsis gaditana|type=polypeptide|length=78bp
MILCGGNCQRRQRPEFQALEIEYVIKSHESLINRACPQDIARVFCQKAPK
FRCGSYESSAKAKLFKAFLKGCVSIRRG back to topmRNA from alignment at CM002456.1:1358281..1358637+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1160 ID=rna1160|Name=rna1160|organism=Nannochloropsis gaditana|type=mRNA|length=357bp|location=Sequence derived from alignment at CM002456.1:1358281..1358637+ (Nannochloropsis gaditana)
ATGATTCTGTGCGGGTTCGTACGCCCTTTGTACTGCCCGGGCCTACGTAC
AACGGCTTTTTCTCATGAAAGAAATATTTCACTATCATCCAGGGGCAATT
GTCAGAGGCGTCAACGGCCAGAATTTCAAGCTTTGGAAATTGAGTATGTT
ATTAAATCTCATGAGTGTCGAATACATTTTAACATGTCAGTGCTTTCGCT
CTAAATAGCCCTGATCAATAGGGCATGTCCACAGGACATTGCACGAGTTT
TTTGTCAAAAAGCCCCCAAGTTTAGATGTGGCTCATACGAGTCTTCTGCA
AAAGCTAAGCTTTTCAAGGCGTTTTTAAAAGGATGTGTAAGCATTAGACG
AGGTTGA back to topCoding sequence (CDS) from alignment at CM002456.1:1358281..1358637+ >rna1160 ID=rna1160|Name=rna1160|organism=Nannochloropsis gaditana|type=CDS|length=711bp|location=Sequence derived from alignment at CM002456.1:1358281..1358637+ (Nannochloropsis gaditana)
ATGATTCTGTGCGGGGGCAATTGTCAGAGGCGTCAACGGCCAGAATTTCA
AGCTTTGGAAATTGAGTATGTTATTAAATCTCATGAGTCCCTGATCAATA
GGGCATGTCCACAGGACATTGCACGAGTTTTTTGTCAAAAAGCCCCCAAG
TTTAGATGTGGCTCATACGAGTCTTCTGCAAAAGCTAAGCTTTTCAAGGC
GTTTTTAAAAGGATGTGTAAGCATTAGACGAGGTTGAATGATTCTGTGCG
GGGGCAATTGTCAGAGGCGTCAACGGCCAGAATTTCAAGCTTTGGAAATT
GAGTATGTTATTAAATCTCATGAGTCCCTGATCAATAGGGCATGTCCACA
GGACATTGCACGAGTTTTTTGTCAAAAAGCCCCCAAGTTTAGATGTGGCT
CATACGAGTCTTCTGCAAAAGCTAAGCTTTTCAAGGCGTTTTTAAAAGGA
TGTGTAAGCATTAGACGAGGTTGAATGATTCTGTGCGGGGGCAATTGTCA
GAGGCGTCAACGGCCAGAATTTCAAGCTTTGGAAATTGAGTATGTTATTA
AATCTCATGAGTCCCTGATCAATAGGGCATGTCCACAGGACATTGCACGA
GTTTTTTGTCAAAAAGCCCCCAAGTTTAGATGTGGCTCATACGAGTCTTC
TGCAAAAGCTAAGCTTTTCAAGGCGTTTTTAAAAGGATGTGTAAGCATTA
GACGAGGTTGA back to top
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