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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100006g17.8644.mrna |
| Orig protein id | gnl|cribi|Naga_100006g17.8644 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:1314302..1314696 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1151 ID=rna1151|Name=rna1151|organism=Nannochloropsis gaditana|type=mRNA|length=4715bp
CCAGTGTAATCTCTCCGTCGGAATGCTTGTGAATGCAAGCCCTACGAGGT
AATTTCCCGTTTAATGTGGTATTTCTTTGCCCTCTTGACCCAGAAAAGCT
CGGGTGGTGTAAGCCCGAACGGAATCGGAGAAGCGTTGCGCCTCAAATTT
AACACGCCGTCTTCGAGAAGGACTGCATACAACACCAGACTAGTGTGTTT
TGGTACGGTCTAGACCTCCAAAAATGTTGGAGAAATGTAAAATACTTCCG
TAACGGCGATATCAGGCCTTACCGGAAAAGGAACACTCCTCTAAGACACG
TGGCAACATATCACACATGGCGAGAAGGTTTGTTCTCAGGTAAAACTGTG
CCTGTGGCCAAAGTATACAGATCAAACAAACCGGACATACATTGACAACA
TTTTGCCGTGAGAATGCCAATGCACTACCAGCAACATGCTGCGCATGCAA
ACACAGACCTGTCTCGTCCGCTTTGCCTAGAAGTGCGAGACTTTGCAATG
AGGCCCGAGAAGCATTTGCCATGACGTGCTAACGACATGCACTGGAAAGT
ATGATCGCGATGATGCGCGAGCGAAGTCATCAACTCCATTGATATAGCAA
GCATGATCTGCGCTGTGCTCGATGTGTAGAGGCAGGGGGCGGATCTCAGG
CGTGCTTGAGAAAGGTTGCACCTTGAGCTGTTTCAGCGAGGCTGTGTTGG
GGGCCCTGATCCCAAACGACGAAGTGTATTTCCTTTGCTTGGCTCCTGCC
TCTGAGTAATGAAGTGTGCTGGTGTCTTTGTCTTGTCAGCCATGATATAC
GACTCACAACACGGTGAAATTGTCCTCCCCTTGTCAAGTGGCAAGGATTT
GGTAATGTCGATGCGCTGTTTGCTGTGCGGGGATCTCGTATTGCCGATCC
AACCATCCAAGAAAGGTCGGGTCGAAATGACTTTGAAAGGGCTGATGACC
TGTATAGGAGTACATGAACATCCATGCGTGCAGTGTAGCGTGTTACGTGG
CTGCGTGCATGCGGAAAAAACGACACTGCATGTCTCTTGCGGACAATCGG
GCGCTTTCAGCCGGCCTGGGTCTACGTGGCATTATGTCATGAGGTCCTGC
ACTAGATCTCCGTGCAGGTCAAGTTGGTTGATCAAATAGGCGCACGGCTC
GACTTCTTCCCTAAGCTGGAATCGGACTGTGTCACGTGCTTTCCTACTAC
TCTACCACCACTACTCATACTGGCCTTTCGGCGCGGACCATTTTTCCCTA
CAGATGCAAGGAGATGCCGGTCCACCCTTAAGTGCCTGGTGCGCACGCAG
CATGTCAGCACAGCGTCTCTTGAGGTTGCGACCGCTATGAACGCCGTCAG
AGACGGTGGGCCTCCTGGCTGGGCTCTGGTGGGCGAGCTCCAGTCAGCAC
CAGGATTGGACCGTCTAAGCCATTGTCGTCTAGCGGCGACGACCTTTACG
TACATCGGATACCGACTGCGCAAAGCCGGACGCCTTCAGCACTATAAATT
GCAAGGGATCCTGCGTGCATGGGATGTGTACTGTTACCGAACCAAGACTG
ACGTGACATGCGGGGCTTTGCTGGGCCTGTATCGTATCCTGGCATCGCCT
ATACCTCATGGCGTTCCAATCTGTTATCAGGCGTCATTACAGGAGAACAT
TTCAATGTACGATGATCGACCGATTGAAGAGAAATTGTCCCCTCACCACA
TGCCGGAGTACGTGTTGAGGCTTTGCATGGAAAGCCGCAAGGAAGGTGCT
GCTGTATGCGGATACACGTACGTGAACGGGCACTTCCAACTGTGGACGGA
CACTCTCTTTGCGGAGAAGTACTACACTGCGACCGAGGCGAACGCACGTT
TCACGCAGTTTGCAGTCCTGCCTTGTTATCTGTACGGGTGTTTATTCCAT
CCTCGAGATCGGCCCTGTTTTTACGAGCTCCTGGTCGAGTACTTGTTGAC
AAAGGGGGACGAGAGGCGTCGTCTAGCCATGGTGGCGGAGGTGCTAAGGA
ACGACGGGACCAGCGAGGCTTGCTTGGTACAGGCACGACACACGGTGATG
AATGACGGTCAGTACCTGGCCTTCGCCATGAGCTTTCTTCCCTTGGCCAA
CGCCAGCGCGAGCTCGTACACGGTTCATCATCTCCGCAAGTGCAGTGCCT
GGCATGCAGAGCGGCTGGACCTTCCTGACCTGGAGAACGAGGGGGAGAAA
GTGCTTGGGCTTACTCCGTCCATACTGGGAGCCTCGGGTTTGTCAAGAAT
AGAGCCCGAAGGGGCAGCTCAGGGAGGCTGTCAGTCACATGTAAGCGGGC
TGGACGTCGGGCATGGGGCGGGAGACCTGAGTACAGCAAAACTACGAGGA
GGACTACGAGGGGGAGAACATGGCATTAGGGCGGAAGGGAGGGGAGCGCG
CAAGCAAGGAAGGAGAGAGGCAGATAGAGGAGAATCAATGGCAGGGGGAG
GTAAGGCAGCAAACCAAAAAGGCGCCGCATCCAAACGTAGTACTGCTCAG
TCTCGTGGCGGGAGACATGGATGTGGACGAGGCAGCACCGATGCGACCGC
AGGAGGGGAAGGATCTCATGAAGACAGAGAGCCCTTCAACCAACGATCTT
ACACGAGACCCTTCGCTGACGGACAGATGCCAGCTCGGGCTTCACAAGCG
TACGTCCTACCATCCTCGACATCCTTCGCCGTGGGTGACGCACAGCGACA
AGTGCACTCTCTATCACAGCAGAGGCAGCCTGGACAACTGCAAATGGGCG
TCGGATCGAGCTGGCAAAGCATGGCTTGGCCTCGCACGACGTCCACAGGA
GAGCGAAGTCGGGATAAGGAAGGAGGAGAGAAAAATCAAGGAGGAGAAGG
GCGAAGAGACGAGCTACAAGGGGCCACAGGAGAGCTCGATCCTGCTGGGG
GACGACAAGGAGTGAGAGAGTACTTGTACGCACAGGATACACACGGCAGC
ACAGCGTTTGACCCGGCGGGGACGATATCGCCGCCTGTACCGATGCACCC
CCTATCGCTTGTCTCGCGTCCATTGCAAGACCAGCAGTATTTGTATCGCC
ACCCACAGCATCGACATCAGTGGCAACCGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCATCAAGGCCAAGCGCACAAGGCCAAGCGCAACACATGTTGCAG
CAACAAGAACAAGGGCAACCAAATCATCAGCAACAACAGCCACTGCTGCA
ATACCACCACTAGCAGCAACAACTGCAACTACAGCAACAGCAACATGAGC
AGCGACACCAGCAGCAGCAGCAGCACCACCATCGCCACGATCAAGAGCAA
CTACAGGAGCACCATCGTCAGCAACAAATTGAGGGCTTACGGCAACCACG
TTATCATCATCATCATTCACAACCACGACAACCCCGACAACAACAACAAC
AACAGCCACAACAACAACAACAACCACAACAACAACAACGACAAGAAGTT
TATCAGCCGCACCGACAATACCATGGGGCTTATTCGGGTAGGAATACGCA
CGAAGGTGATGCCGGAGCAAGAGCAAGACAAGGACGCTACCAGGAGGAGG
AAGAAGAACCGCTTGCGCATTCCTCGCTCATGGGGGGTATCCCGCGCGAC
GACATGGCCACGCTTTGTGGGCTTGAGGCCTATTTGAACGCAAATGACAG
GGAAGAGGAGGGATACATTGAGGACAGACAAGAACGTGAGACGAGAGGAA
TGGAGGACGACGGTGAGGAAAGGAAAAGTGAGTGACAGGAGGAACCTGAC
CCTCGTTCCCACCACCATGTGCGTCCTCGATTCAAAAGCCCATCATTGGA
TATGGCGAGAGGCTTAATGGAATAGCAATTTGTTGAAAGCGATGTAATAC
GGCTCGCGCGGAGTTAGACCAAAAACCTCACGTACGGTGATTGTACAAAA
CAAGGGTACAGCAAGGATCGAGCAAGCAGTGAGAAGCTAATGACAAGGCA
AGGGCAGGGAGTCGTGCGTGGCTGATAGAAGTCTTTTCTGTTCTCCGGGT
AAGACTTCCTTGGCTGCGAGCATTTCACAATGTTCTACACTCTTTACTAT
GTCCCTTATTGGGTCGAAAATATACTGCAGGTTTGCCCTGAAAATGATAT
TCCATGATTCTCGACCGTCTATTTAAATACTGATCACGCTCTGGTTGCTT
TCAAAAGGAAATTCTGAGGGAACAGAAGCATAAGACGGATTTCATTAAGA
TTCACATGGCCATAGACAACTAATATCTTGTTTTCTCCTCTCCTCTATTA
TCACACTCATTTATCGGCATCTTCGCGGAGGCTGTCGTCGCTGCCGGCTC
ACTCACGAGTGCACGGTACTTCATTCTACACCGCATCAAGTTTCTTCTCC
ACTGTATGCATAGCCACGTGCTCTTTACTCGCTTATATTCCTGTTCTTTT
TGACGTAGCGTCTTCTATCGGCGAAAGTGTCGAAATGGAAGATGCCAAGG
CGGACTGGGGCCCATTTTCTGCGAGCTTCCAGTCATCCGGCGACAAAAGA
TTCTCATCCAAAGGAAAAGTAACATCAAAACCCGCCTTTAATCCGAGGAG
GTGTTTGACATCGCGGGCGATCGTCTCAGTCATAGAAATTAAAGGCAACT
GTTTGGTGCTTGCACAAAAGGGCTCCTCAATCAGATGTCCGATCTCCTCG
CTGGTTATTAGGAGAAAAAATAGAATGATATGATAATATTAGATAATCGA
GATTGTACAATTATC back to topprotein sequence of rna1151 >rna1151-protein ID=rna1151-protein|Name=rna1151|organism=Nannochloropsis gaditana|type=polypeptide|length=85bp
MHTVEKKLDARRGENKILVVYGHVNLNEIRLMLLFPQNFLLKATRAANLQ
YIFDPIRDIVKSVEHCEMLAAKEVLPGEQKRLLSA back to topmRNA from alignment at CM002456.1:1314302..1314696- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1151 ID=rna1151|Name=rna1151|organism=Nannochloropsis gaditana|type=mRNA|length=395bp|location=Sequence derived from alignment at CM002456.1:1314302..1314696- (Nannochloropsis gaditana)
ATGCATACAGTGGAGAAGAAACTTGATGCGGTGTAGAATGAAGTACCGTG
CACTCGTGAGTGAGCCGGCAGCGACGACAGCCTCCGCGAAGATGCCGATA
AATGAGTGTGATAATAGAGGAGAGGAGAAAACAAGATATTAGTTGTCTAT
GGCCATGTGAATCTTAATGAAATCCGTCTTATGCTTCTGTTCCCTCAGAA
TTTCCTTTTGAAAGCAACCAGAGCGTGATCAGTATTTAAATAGACGGTCG
AGAATCATGGAATATCATTTTCAGGGCAAACCTGCAGTATATTTTCGACC
CAATAAGGGACATAGTAAAGAGTGTAGAACATTGTGAAATGCTCGCAGCC
AAGGAAGTCTTACCCGGAGAACAGAAAAGACTTCTATCAGCCTAA back to topCoding sequence (CDS) from alignment at CM002456.1:1314302..1314696- >rna1151 ID=rna1151|Name=rna1151|organism=Nannochloropsis gaditana|type=CDS|length=774bp|location=Sequence derived from alignment at CM002456.1:1314302..1314696- (Nannochloropsis gaditana)
GGCAAACCTGCAGTATATTTTCGACCCAATAAGGGACATAGTAAAGAGTG
TAGAACATTGTGAAATGCTCGCAGCCAAGGAAGTCTTACCCGGAGAACAG
AAAAGACTTCTATCAGCCTAAAGGAGAGGAGAAAACAAGATATTAGTTGT
CTATGGCCATGTGAATCTTAATGAAATCCGTCTTATGCTTCTGTTCCCTC
AGAATTTCCTTTTGAAAGCAACCAGAGCATGCATACAGTGGAGAAGAAAC
TTGATGCGGGCAAACCTGCAGTATATTTTCGACCCAATAAGGGACATAGT
AAAGAGTGTAGAACATTGTGAAATGCTCGCAGCCAAGGAAGTCTTACCCG
GAGAACAGAAAAGACTTCTATCAGCCTAAAGGAGAGGAGAAAACAAGATA
TTAGTTGTCTATGGCCATGTGAATCTTAATGAAATCCGTCTTATGCTTCT
GTTCCCTCAGAATTTCCTTTTGAAAGCAACCAGAGCATGCATACAGTGGA
GAAGAAACTTGATGCGGGCAAACCTGCAGTATATTTTCGACCCAATAAGG
GACATAGTAAAGAGTGTAGAACATTGTGAAATGCTCGCAGCCAAGGAAGT
CTTACCCGGAGAACAGAAAAGACTTCTATCAGCCTAAAGGAGAGGAGAAA
ACAAGATATTAGTTGTCTATGGCCATGTGAATCTTAATGAAATCCGTCTT
ATGCTTCTGTTCCCTCAGAATTTCCTTTTGAAAGCAACCAGAGCATGCAT
ACAGTGGAGAAGAAACTTGATGCG back to top
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