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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100006g23.8664.mrna |
| Orig protein id | gnl|cribi|Naga_100006g23.8664 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:1301489..1302129 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1144 ID=rna1144|Name=rna1144|organism=Nannochloropsis gaditana|type=mRNA|length=2208bp
ATGTCGGCAAACTCTGAAGAGCAATCTCAAGTTTTTCCGCATACGTTCAC
AGGGCACTTGTGTCCCCTGCAATCGGATATTTGTCCTGAGAAGACCCTAT
GCTTGGCAGCGGCTTCGTGCTCCGCGGATACCCCACATTGTCCTACGGTA
GCTCAGCTCCTTTTTTTTCAAGAAAAGCACGTTTATGAATGTAGCAGTGA
AGCAGTGCTCACCTTTGGACGCGTCACCGCCCGATTAAAAACCTCTGGCG
AGCTTCAGCATGAGAGAGCCCTAGCCATAATTCATACATGGGACACAACT
TCACGTGCACAACGTGTCGACGTCTCTTGCGGTGCAGCCAATTTAATTCT
TCGTGCTCTGGCCAGTCTGAATAGTACCTACGCATCTCCTGTCCTGCAAG
TCCCCGTTCGTTTCGGTACCTCTGTTGCCTGTTGCCCTGCGGGTGAGCTT
TTAGAGGGCGTACACGTGCCCGCTTTTGTGGCTGAGTTAGATGAGGGAGC
TACATCAGCGTCATGTGGCTTCATTTACACCGGTGGAGAATTTCGAATTT
GGACTGATCTAAATTTCTCGGCAAGGTATTTTGATGCTGAGGAGGCAAAT
GTTTACCATATACAGGCAGGAGTCCTCCCATGCTACCTTTTTGGCTGCAT
AATCCATCGGACTTACCAAGAACAATTCTTTGACCGCTTAGCTGTACACA
TGCTGAAAGACAATACTGAAGAAAAAACCATGTCAATGGTGGCTCAAACG
CTAGGAAGGGACCAGGTCGTCACGCAGAACCTTTTGCGCATCCGGTACGT
GGTGCGAAATAGCGGCCATTACGCATGTCTAGCTTTGAATGTGCTTCCCA
TAGATTACCCTGGTGCCATGAACGGGGAATCGCCTGCTGCTACACCCTCT
GCTTTGTCGTCGGTGATGCCACCAGCTGGGTTTCCCGATCCAGTCACGCA
ATTTTGTGTGCAGAGGGCGGCGTTACGACTTGGAGGAGAGGGGGGAGGGA
TTGGAGAAGCAGAGCGATTACATCGGTGTACGGCGGAAAGGGAGGAAGGC
CTCTTACCTGATGGTCTTCAATTCTCAGCGACAGTAGAACCTGTACCGGT
GAAGGGCGTTGAGGTCCCGGTCTCGTGTGTTTTAGTCACGGTAGACAAAC
ACATGAACTCGGAGTTGTCGGCCACACCGGCTGGAATATACGATCAATAT
GCTAATACTAGCACTTCTACTGGGAGCACCTGTGGGAACAGAAGTCGAAG
GAATGCTGCTTCACTTCGTGGTAGCACGAGCGTCCATGACTTCTTAAATG
AATCTACCTTGCTTCGTGGGCAGACAGGAGCACACGTATCCGACGCAGCA
GAGATTATTTACTACGATGTATCGGGTTCAATATCGCGCGCCCCCCGCAA
CGATAAGCAAGCTTGCGATCTTGATCGTCATGAGTGGAAGCTGCGCACAT
CGTGTAACAGCCCTTATCAGGCTGAAGACCAGCTTTTGCCGCGACTTGTA
TCAAATTGCCGAAAGAGCTGGAAGCTCAAGTGTCTTAAAAAAAGGAAACG
GGACATTGGGATTGCACAGCAACGCAGTGATACTGAGTCAAACAGCCGGC
AGAAATTTGGAAACAATCCCTCTCAGCAAGATGAGGTTAATCAGCGCAAA
GAAGAAGAGGGCGAAAGAATGCAACGGCATTACGAGCTACAGTATCAGCA
TCTTCCCTCCAAAACCTCGGGCGATGAGACTAAGGAAACTCAAGATTCTA
GGAAGCCGGAGCAGGCCAAATACCAGCGAGAGCATACAAAGTCCCAATTA
AGTATCGCGGGTCTACAAAAAGTAGAGTCGAGTAAAGCCCTCGCCTCCGC
CAACTGTACCACATTCTCATCTCCTGCCTTGTCTACATATTGGCAAAAGG
GTTCTCCATCAGCACAGTATCGACACGCCCTCTATCCTGTGGTATTGGAT
CAAGCTGAGATTGACTTTGGAGCCATGCGTCTTCCTCTGTCCCCATCCTC
TGATAATTTGCGTGCTCATGCTGAAGAATCGCACCTATCTCAGCGCTACG
AACGATTAAATCTTGATATTCTTGACTATAATGACATTAATCTTGGTAGC
TGTAGCAATGGGAATGACGGACCGAGTACTCACAATAAGTGTGAAGCAAG
CCAAACGTATCTCGTTCCGTCCTGTAAGACTCCTCAGCACAACGTTGAGA
CCGCCTAA back to topprotein sequence of rna1144 >rna1144-protein ID=rna1144-protein|Name=rna1144|organism=Nannochloropsis gaditana|type=polypeptide|length=109bp
MSNHLAISGLKKEHHESSYPHLHMSDSEHMHGQKLTCNLNPGNDVVARLS
TKNQAWCYILRRRANLSNVLLSYFVIYKKWWLLKTKRAECGRRCSFLLHA
RLASASCCK back to topmRNA from alignment at CM002456.1:1301489..1302129+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1144 ID=rna1144|Name=rna1144|organism=Nannochloropsis gaditana|type=mRNA|length=641bp|location=Sequence derived from alignment at CM002456.1:1301489..1302129+ (Nannochloropsis gaditana)
ATGTCAAATCATCTCGCAATCTCAGGCCTCAAGAAGGAACATCACGAATC
ATCGTACCCACATTTACACATGTCTGATTCAGAACATATGCATGGGCAAA
AGTTAACGTGCAACTTGTTCGTATCCCTTAACTGATTGTTATAAATACAA
GCCTATAAGGCTAAACCAATCCTTTGCAGAGAATTTCTGAGACTAAATAC
ACATATTATGTCTGACATCTACAAAATGAAGACGTTGAATCGCCCAAAAA
TTCACTGCACTTTCAATGCCCAAGAAATCCCGGTAATGATGTGGTGGCCC
GTTTAAGTACCAAAAACCAGGCATGGTGCTACATTCTTGTAAGTTAGGTC
GTAAATGTTGGGCCTCATGATGTGACAAAGGGTATCGTGTATGACCATTT
CCACGTAACACGATTTTTGAGTCGTGGTTTTGTGTATGAGAACGAATCCA
GTTTTGCTAAATTATCAATTTTCCATGATACGTTGTGATAGCGGCGACGC
GCAAACTTGAGCAACGTCCTTCTTAGTTACTTTGTTATCTACAAGAAGTG
GTGGCTTTTAAAGACGAAACGAGCTGAATGTGGACGACGGTGctcatttc
tcctccatgcgcGTCTGGCATCCGCTTCATGCTGTAAGTAA back to topCoding sequence (CDS) from alignment at CM002456.1:1301489..1302129+ >rna1144 ID=rna1144|Name=rna1144|organism=Nannochloropsis gaditana|type=CDS|length=990bp|location=Sequence derived from alignment at CM002456.1:1301489..1302129+ (Nannochloropsis gaditana)
ATGTCAAATCATCTCGCAATCTCAGGCCTCAAGAAGGAACATCACGAATC
ATCGTACCCACATTTACACATGTCTGATTCAGAACATATGCATGGGCAAA
AGTTAACGTGCAACTTAAATCCCGGTAATGATGTGGTGGCCCGTTTAAGT
ACCAAAAACCAGGCATGGTGCTACATTCTTCGGCGACGCGCAAACTTGAG
CAACGTCCTTCTTAGTTACTTTGTTATCTACAAGAAGTGGTGGCTTTTAA
AGACGAAACGAGCTGAATGTGGACGACGGTGctcatttctcctccatgcg
cGTCTGGCATCCGCTTCATGCTGTAAGTAAATGTCAAATCATCTCGCAAT
CTCAGGCCTCAAGAAGGAACATCACGAATCATCGTACCCACATTTACACA
TGTCTGATTCAGAACATATGCATGGGCAAAAGTTAACGTGCAACTTAAAT
CCCGGTAATGATGTGGTGGCCCGTTTAAGTACCAAAAACCAGGCATGGTG
CTACATTCTTCGGCGACGCGCAAACTTGAGCAACGTCCTTCTTAGTTACT
TTGTTATCTACAAGAAGTGGTGGCTTTTAAAGACGAAACGAGCTGAATGT
GGACGACGGTGctcatttctcctccatgcgcGTCTGGCATCCGCTTCATG
CTGTAAGTAAATGTCAAATCATCTCGCAATCTCAGGCCTCAAGAAGGAAC
ATCACGAATCATCGTACCCACATTTACACATGTCTGATTCAGAACATATG
CATGGGCAAAAGTTAACGTGCAACTTAAATCCCGGTAATGATGTGGTGGC
CCGTTTAAGTACCAAAAACCAGGCATGGTGCTACATTCTTCGGCGACGCG
CAAACTTGAGCAACGTCCTTCTTAGTTACTTTGTTATCTACAAGAAGTGG
TGGCTTTTAAAGACGAAACGAGCTGAATGTGGACGACGGTGctcatttct
cctccatgcgcGTCTGGCATCCGCTTCATGCTGTAAGTAA back to top
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