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Properties
| Property Name | Value |
|---|
| Product | S-adenosyl-L-methionine-dependent methyltransferase-like protein |
| Orig transcript id | gnl|cribi|Naga_100006g26.8682.mrna |
| Orig protein id | gnl|cribi|Naga_100006g26.8682 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:1288009..1291009 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1141 ID=rna1141|Name=rna1141|organism=Nannochloropsis gaditana|type=mRNA|length=1514bp
TAACTAGATCTTTGCGTGGAATATCTCGACCCTGTGTAGTTTGGCGGGAG
AGCACAATTGCGCACACGGCGTGATACATGAAATGAAGGAACGTGTTTCG
GGGTCATATATACGGCGAGGGGTATCAAACAAAGTCTAAACCTCAGCTCA
CGTTGTCATCATGAAATCCAGATATTGATAAAGCCCTACACTTCCATTTG
GTGAATGGGATTGCTGGAACGCTACCATGCCTCGCCTCATCGACAAAAAA
TCAACAACGTTCTGATGGTGGCTGGGTTCCTATCTCTCTCCGTCCCTTTG
CTTGCAGAAGGCGTGCAATTCATTCTCCGCTTCCGTCGCCGCACTGACGA
CAAGACTGTGACCCGAAGAGCACCCAGCAAGATCTACCGTGTCGTCGTGT
CGGGCGGGCCATGTTCTGGCAAAACCTCGTCGCTTACTCACCTCCGTGAC
GCGTGCATGCATGCAGGATATGAAGTGTTAGTGGTCCCGGAGGTTCCCAC
GCTACTCATGCAAGGGGGAGCTCTTTACCCCGGGCTGGATGGTGGGCCTC
GCCTTGTTGCGTTCGAAGTTGCGCTTATTCAATTGCAAATCCAAATGGAG
GAGTCCTTCGCAATGATAGCGCGTTCGACGGGTCAACCTACTGTCATCCT
GCATGACAGAGGAAGTGTAGATGTAGCGGCTTACTTAATGCCGTCGGACT
GGCTAGCTGTCCTTTCGGCCTTGGGAGGACTCAGTACCTTAGACTTGGCG
TCGCGGTACCATCAAGTTGTTCATCTTGTGACGGCAGCAGACGGAGCGCC
TTCTTTTTACACCCTCAGCAATAATGCTTCCCGCACCGAGTCCGCAAAAG
ATTCCCGTGTTATTGACCGTCGCATTAAATCGGCATGGAGTCTGCACCCA
CACCAAGTGATAATAGGAAATGAGACTGATTTTGCAGGAAAACTCGCGAA
AGCCACAGATGTTGTACTAGTGGGGGCACACAAATTTTTCAGTGAGGCGT
CGAAAGAGACAGGCGATATCGAGGAGGGAGGCTGTGGAGGAGGGGAAAAT
TTTGGGAGAAGGAGATTTAAGTAGTACATACTCGTTTGGTCTCAGCAAGG
AATGTTTTCTTATTTTTCTTGGGATTGAGAGATACCTTCTATTATCAAGG
CATTGTGTCCATCTCTAAATGGGCAGTGTATACCTTGGACGAAGTTCTCT
TCCAGGACTTTTTGGTCGTCCCGATCGGCAATAAACTTGACTGAATGTTC
TTTGCAGCATATGTAGTACATCCACAAATCTAATCACGCTTCCTCAGCGC
AAAGGTTCCACTTTCTGGGGGGGGAGTGACGCGTACGTTACTGTCGGGTA
TTCGTCCGGGATTCGAGCTACACACTAAGCCAACCTGCAATGAAAGCTCT
TGAGAAACCAGGCAAAAATATACCATCTCTCCAAAACGTGAGATTAGGAT
TGGTACATTACCCAGGCAATATCTTCCACTATGATGCCCGCCTTGAAAGG
AAAAGAAAACGTCC back to topprotein sequence of rna1141 >rna1141-protein ID=rna1141-protein|Name=rna1141|organism=Nannochloropsis gaditana|type=polypeptide|length=446bp
MVTSSLPPQPAVSVEIAARQPDLPLLSSRQSPRTNTRIFRPRVLALQNRS
AESGPCRSFLKRDDRIRMGHLPSPSCTLHSTDSPSSSLLRSLSSSFRWQR
HAHGSYRAYYGARRRPVAASTFSTSSDTRAGNKDARLELLSPEWFVHKDC
LDVGTNTGKVAWEIYESYRPRCMVGVDIDEELIRVAREKLAWAKARDGKE
HDKYISFLCQDFAQDTLEEEETEDRRMEGSESEHGITNGGTERVPRMIWE
GREKRKKAGGETAYLSDGMKQSDEIHRDKGVELSGMKWTVQKDGLGVKKI
EGLERGEGRGKASRKFDVITCLSVTKHVHLQGGDSALLRLFRRMYEALRP
GGRLILEPQAWRTYRKRKNASKESRENFPLLRLRPPFTQDLLETIGFQSV
EELGIPPRAPEGFKRAMFCFVKKDALSHDEMPIDYKDMYIKKNSKV back to topmRNA from alignment at CM002456.1:1288009..1291009+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1141 ID=rna1141|Name=rna1141|organism=Nannochloropsis gaditana|type=mRNA|length=3001bp|location=Sequence derived from alignment at CM002456.1:1288009..1291009+ (Nannochloropsis gaditana)
tcctccacagcctccctcctcgataTCGCCTGTCTCTTTCGACGCCTCAC
TGAAAAATTTGTGTGCCCCCACTAGTACAACATCTGTGGCTTTCGCGAGT
TTTCCTGCAAAATCAGTCTCATTTCCTATTATCACTTGGTGTGGGTGCAG
ACTCCATGCCGATTTAATGCGACGGTCAATAACACGGGAATCTTTTGCGG
ACTCGGTGCGGGAAGCATTATTGCTGTTCCATGTTACGATACATAAAAGA
GGAAATAATGAGAGCATTGAACTGGCAGTtagaaaagaaataaaacGTTT
GTGAAAACGACGTGTCGTGCTGGATTGAAAGATGCCACAGTACAATTGCC
AGCTGTAGCACAGGACGAGGGCTACGTAACGAAGGTGAGAACATGCACAC
AAACATGTCAAGCGCACACCTCCGAGCCTCTCTCTACCTGGATCATCGAG
AACATGTCAAGCGCACACCTCCGAGCCTCTCTCTACCTGGATCATCGAGG
ATAAAGTCCAAGTCGGGAGCGGACAACGGGGAGACAAGACAGAGGGATAG
ATGCGAAAATACCTGAGGGTGTAAAAAGAAGGCGCTCCGTCTGCTGCCGT
CACAAGATGAACAACTTGATGGTACCGCGACGCCAAGTCTAAGGTACTGA
GTCCTCCCAAGGCCGAAAGGACAGCTAGCCAGTCCGACGGCATTAAGTAA
GCCGCTACATCTACACTTCCTCTGTCATGCAGGATGACAGTAGGTTGACC
CGTCGAACGCGCTATCATTGCGAAGGACTCCTCCATTTGGATTTGCAATT
GAATAAGCGCAACTTCGAACGCAACAAGGCGAGGCCCACCATCCAGCCCG
GGGTAAAGAGCTCCCCCTTGCATGAGTAGCGTGGGAACCTCCGGGACCAC
TAACACTTCATATCCTGCATGCATGCACGCGTCACGGAGGTGAGTAAGCG
ACGAGGTTTTGCCAGAACATGGCCCGCCCGACACGACGACACGGTAGATC
TTGCTGGGTGCTCTTCGGGTCACAGTCTTGTCGTCTAAGAGGAAcgcatg
gagggaaaaacgGCGCAGAGATTTGAAATTGAAAAAATCATTGCGAAAAC
CGCTTTCTTCTTATCACATGGCCTACAGAGTAAGTATACGATTGTTACAT
TTGATTTACCAGTGCGGCGACGGAAGCGGAGAATGAATTGCACGCCTTCT
GCAAGCaaagggacggagagagaTAGGAACCCAGCCACCATCAGAACGTT
GTTGATTTTTTGTCGATGAGGCGAGGCATGGTAGCGTTCCAGCAATCCCA
TTCACCAAATGGAAGTGTAGGGCTTTATCAATATCTGGATTTCATGATGA
CAACGTGAGCTGAGGTTTAGACTTTGTTTGATACCCCTCGCCGTATATAT
GACCCCGAAACACGTTCCTTCATTTCATGTATCACGCCGTGTGCGCAATT
GTGCTCTCCCGCCAAACTACACAGGGTCGAGATATTCCACGCAAAGATCT
AGTTAAAGACATAACGAAGCCCAGCTTTCTTGAAAACCCACACTTTCAGG
AGCTGGAAAAGCATTATCGTTTTATGGAAAGATGGtaacctcctcactcc
ctccccagcctgCTGTGTCTGTAGAAATTGCTGCAAGACAACCGGACCTA
CCACTTTTATCTTCACGTCAGTCACCGCGCACCAATACAAGGATATTTCG
ACCACGTGTCCTGGCGTTGCAAAACCGAAGTGCGGAAAGTGGGCCATGCA
GAAGCTTTTTAAAGCGCGACGATAGAATCCGTATGGGTCACTTGCCATCG
CCCTCCTGTACTTTGCACTCCACCGATAGCCCCTCTAGCTCGTTATTGAG
GTCTCTTTCCTCATCTTTCCGCTGGCAACGACATGCCCACGGATCGTACC
GTGCTTATTATGGTGCCCGTCGTCGACCTGTTGCAGCGTCTaccttctcc
accagctcggACACACGAGCGGGCAACAAAGATGCCCGACTCGAGTTACT
TAGCCCTGAATGGTTCGTCCATAAAGATTGTCTTGATGTTGGAACCAACA
CTGGAAAGGTGGCGTGGGAAATTTATGAGTCCTACCGGCCACGATGCATG
GTAGGGGTGGATATTGACGAGGAGCTGATCcgggtggcgagggagaagct
GGCATGGGCGAAagcaagggatggaaaggagcacGATAAGTATATCTCTT
TCCTGTGTCAGGATTTTGCCCAGGATAcgcttgaggaagaggagacagaa
gaCAGAAGAATGGAAGGAAGTGAGAGCGAGCATGGGATCACGAATGGCGG
GACAGAGCGGGTACCGAGGATGATTTGGGAGGGtcgggagaagaggaaga
aggcgggtgGTGAAACGGCTTACTTGAGTGACGGCATGAAGCAGAGTGAT
GAGATACACAGGGATAAAGGCGTGGAGTTAAGTGGTATGAAGTGGACGGT
CCAAAAAGATGGGTTGGGAGTGAAGAAGATTGAAGGGTTAGAGCGAGGTG
AAGGTAGAGGAAAAGCTTCTCGAAAGTTTGACGTCATCACATGTTTGAGC
GTGACAAAGCATGTACATCTTCAAGGGGGGGACTCAGCGCTGCTTCGGCT
GTTCCGTCGAATGTACGAGGCGCTCCGCCCTGGTGGCCGTCTCATACTAG
AGCCGCAAGCTTGGCGAACGTACCGCAAAAGGAAAAACGCTTCGAAGGAG
TCACGCGAAAACTTTCCCCTGTTGCGATTGCGACCGCCTTTCACCCAAGA
TCTGCTGGAGACGATCGGTTTCCAAAGTGTTGAAGAACTTGGGATCCCTC
CGCGTGCACCAGAAGGCTTTAAGCGCGCAATGTTTTGTTTTGTCAAGAAA
GATGCACTATCGCACGATGAGATGCCGATAGATTACAAAGATATGTATAT
CAAGAAAAATAGTAAAGTGTAACTTAACTGCAAACGATTGAGAAAAATGC
TCGAGATATCATAGAAATAAGCACAAGGAAATAACTCTGGCATATCTACG
G back to topCoding sequence (CDS) from alignment at CM002456.1:1288009..1291009+ >rna1141 ID=rna1141|Name=rna1141|organism=Nannochloropsis gaditana|type=CDS|length=1341bp|location=Sequence derived from alignment at CM002456.1:1288009..1291009+ (Nannochloropsis gaditana)
ATGGtaacctcctcactccctccccagcctgCTGTGTCTGTAGAAATTGC
TGCAAGACAACCGGACCTACCACTTTTATCTTCACGTCAGTCACCGCGCA
CCAATACAAGGATATTTCGACCACGTGTCCTGGCGTTGCAAAACCGAAGT
GCGGAAAGTGGGCCATGCAGAAGCTTTTTAAAGCGCGACGATAGAATCCG
TATGGGTCACTTGCCATCGCCCTCCTGTACTTTGCACTCCACCGATAGCC
CCTCTAGCTCGTTATTGAGGTCTCTTTCCTCATCTTTCCGCTGGCAACGA
CATGCCCACGGATCGTACCGTGCTTATTATGGTGCCCGTCGTCGACCTGT
TGCAGCGTCTaccttctccaccagctcggACACACGAGCGGGCAACAAAG
ATGCCCGACTCGAGTTACTTAGCCCTGAATGGTTCGTCCATAAAGATTGT
CTTGATGTTGGAACCAACACTGGAAAGGTGGCGTGGGAAATTTATGAGTC
CTACCGGCCACGATGCATGGTAGGGGTGGATATTGACGAGGAGCTGATCc
gggtggcgagggagaagctGGCATGGGCGAAagcaagggatggaaaggag
cacGATAAGTATATCTCTTTCCTGTGTCAGGATTTTGCCCAGGATAcgct
tgaggaagaggagacagaagaCAGAAGAATGGAAGGAAGTGAGAGCGAGC
ATGGGATCACGAATGGCGGGACAGAGCGGGTACCGAGGATGATTTGGGAG
GGtcgggagaagaggaagaaggcgggtgGTGAAACGGCTTACTTGAGTGA
CGGCATGAAGCAGAGTGATGAGATACACAGGGATAAAGGCGTGGAGTTAA
GTGGTATGAAGTGGACGGTCCAAAAAGATGGGTTGGGAGTGAAGAAGATT
GAAGGGTTAGAGCGAGGTGAAGGTAGAGGAAAAGCTTCTCGAAAGTTTGA
CGTCATCACATGTTTGAGCGTGACAAAGCATGTACATCTTCAAGGGGGGG
ACTCAGCGCTGCTTCGGCTGTTCCGTCGAATGTACGAGGCGCTCCGCCCT
GGTGGCCGTCTCATACTAGAGCCGCAAGCTTGGCGAACGTACCGCAAAAG
GAAAAACGCTTCGAAGGAGTCACGCGAAAACTTTCCCCTGTTGCGATTGC
GACCGCCTTTCACCCAAGATCTGCTGGAGACGATCGGTTTCCAAAGTGTT
GAAGAACTTGGGATCCCTCCGCGTGCACCAGAAGGCTTTAAGCGCGCAAT
GTTTTGTTTTGTCAAGAAAGATGCACTATCGCACGATGAGATGCCGATAG
ATTACAAAGATATGTATATCAAGAAAAATAGTAAAGTGTAA back to top
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