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Properties
| Property Name | Value |
|---|
| Product | dnaj-like sec63 |
| Orig transcript id | gnl|cribi|Naga_100006g57.8606.mrna |
| Orig protein id | gnl|cribi|Naga_100006g57.8606 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:1208380..1211268 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1110 ID=rna1110|Name=rna1110|organism=Nannochloropsis gaditana|type=mRNA|length=3100bp
ACCAGCGCACAAATGCATGGGCACGAAACGTCGCTAATGGGAGCACCGAT
GAGATGTTTTTCCAAGGTCCTTACCATATCCTCAACCATAATATTTCTTA
CGGGCTCTTAATTGGGAAGCCCGAACAATTCGGCACGTGATGACGGTCCC
ATTGGTACCCCGTGGGACCAGACTCCCGAGCGCGGACACGATGATCGAGA
GGCGCTACCGCTCTCAATTGAAACGGACCCTCGAATTACTGGATCATGAT
CCTCAGGTGTGTCGGCAGCGGCAGCGGGTTCCGTCGTCCATCGACGTGCA
TACGGCATTACCCAAGGTGTGGTCGCAAGTGACGGAGGCTCGTAAGGCGC
TGGCAGTCGAGTACATCACTCACTTAACAGACCATGATTCCGACAACACG
AGAGCTTCCAAAGGACTCGGCAATCGTCTATGGCTTCTCTTTTACAAGGA
AATAGAGGCACTGCAAAGCAAGCTCAGGACGCCAGCGTCGGGAGATGGGG
AGGGTGAGGGCGCGGAAATGCGTGCGTTGTGGAAAAAGCGGCTGGAGGCT
GTCATGTTGGAAGGAGCGAGTGTACTAACGGAGGCGTTGCAAAACGTTCG
CAAAGCCAGCAGCAACGGAGTGGACGTGCATGGGGAGGACTCCGTCGCTT
TGATGGTGGCCTTGGGCGACCTGGCTCGGTATGCGGGTCGGATGATGGAC
GCGGCGCGCGACGGAGAAAGGACCCAGAAATGCTTGGAGGAAGCAGAGGA
ATGGTACGTCCAGGCAGCCAAGACGCGGCCGGGCTTTGGTCGGACCTACA
ATCAGTTGGCCATCGTCTGCACGCTGAAATCGAGACGGGTGGGGGAGGGA
GAGGTCCTGACCGCCGCCTTCGAGTACACGCGGGCGTTCCTAGCGGCGAC
GGAGCCCTTTCCAGCCCAAGAGAATTTGATCGCGCTACTCGATCGGTGGC
GGCGGCTTCACGAGTCTGCACTCAATGCAGCGACGAAAGCCAAGTCGCTG
GCATGGCTCCGGCAATCAACGAGCAGACAGAAGGGCGGCGGGCACGGGAA
GGGAGACCCGACGTCGACTCTGAGCCCCGACAAGGTCTTCCTCCATGCCC
TCCTGAAAACGCTGCACATGATTTACAACCGCGTGGACCTGGATGCGGTT
CCAGCCTGTGCCCACCAAGTCGGGCAAGCGCTGGTTACCTTGGCACAGGG
CCTTGCGACCCCGTCGCGGAAGAAGAAGAAAGAAAGCGACCGAGGCGCCG
AGATCGTCGCTCAGACCTTGGATCGGCAGAATCTGGGTACCGGAGCCCAT
CCTTTGTCTTCACCTGCCCTTGGAAGCGAAGAACCTGCGGTTTGGAGCGG
GACAAAAGGGCTCGGGCCAGGCGTGCACGCCTCCGAGCCGCACGCCATGG
GGACTCTGTGCGCGCGTGTGGTGGTGGTGGTGACGGGCGCTTTGTGGACC
CGGGCCGAGGCGGCGGGCTTGTTCCTACGCGGGAGGGAGGTGGATGACGC
CTGCCACAACAGGAATGGCTTGCCCGTGCCCCCCACTCCGGCAAATTCTG
GGGCCAGCCCCTACCCTGAGGCTAGGGCAGCGGGGCGCTCGAAGAAGCCC
CCCGCCGACGTGCGAGGGGCATTGGCGCTGGTCATGGAGGTGGGTTTGGC
TCTGGCGAATAGAGGGGAAGGCAGCAAGGAGGGGTGGGACGTAGGAAAGG
GTCCTGCCTTGGTGTTGTTGTTGCGTTGGTTGTGTGCGAATCAAGCCTGG
GTGGAGGGCTTGCCAGGGGAGAGGACGGAGGCGATCGCCGGATTAGCCCG
GTCGCGGCTGAGGGAAGAGAGAGGGAAACGAGTGGTGGAAGGCGAGAATG
GGGACGACTGGGGGGGAAATGGAGGTGACGGTACACCAGGGGTGGTGCCA
GAGGGAGTCGGACGGCGAGAGCTGCCGTCTTCGGCCGGGCACGGCTTGGT
CTTGGCGGGGCTGCGGGGCTTTGGGTCGTGGGAGGAGGGAATGGGAGGCG
GTGTGGACCGAGAGTCTTTGGGCACCGTCCAGGAGAGGGAAGACACGAGG
CGGAATGGGGAAGATGACGGGGAAAAGGGGTGGAAACGAGAGAGGGATAT
GGCCGCCTGCCAGTATTGGTTACAGGCTTTGGACTTGAAGAAAAGTCGGG
CCGCGGTGCACCGCATCCATCAAAAAAGCTGCGAAGAGGAAGACAATAAT
TCGGTGAGACCTGCGGACAGTGTGCCGGAGGCTTTGAGGCCTCCATCCCC
GCCGTCAGATCTGCCGGCCAGGCTCTCGTCCCTCAGCTTGTCTCACTCCC
GACCAATGCCCATACAACGCACCCACTCCACGTCCCCCCCCTTGTCCTCC
TCCGCCGCGACCCCCTCCTCCGCTTCTTCCTTCTCCCTTTTCTCCTCCCC
CTTCGTCGCCCTGGTCCCCCCCACCCTCCCATCCCAAACGCCGGGTCTCC
TTTGTCCGGTCTGCTCCTATGCTGTGGAGGCAGAGCGGATGGGCCATCAA
GAGGCTTGCTGCGAATGCTGCGGGCACGTATTTGGGCAACGACGAAGTGC
GAGGCCTGAGCTCAACCCTGCATCAGGTGCGCTGGCGTCCGAGGTGGCGG
CTGCGGTTGCTACTGCGGCGGGCTACACACAAAGGATCGGGACGGACCCT
TATGCCCCTCAGGTCACCTTCCCTCCACGAACGTCCACCTCGACCTCGAA
CGGACCGACCAAGGCTGTGCTGCCCCCGCCCCCAGGTCTGGGCTGAGGGG
GCGTCGGTTTGAAAGGGTTGGTATGTTGGAGGCTGATGGTCTGAGGAAAA
TGTTGACAAAGACCTTAGGGGAGGGGGGGGGGGTTTGCGAGCGGACCCCC
GAGCTGAACGAAGCGGGTGGACAGGGGATATGGAGCGCTCAAAGGCCTGG
AAAAACAATGCTTCTGTCTCCTCAAGTCAGAACTTGGGTTAATTTGCGGT
TTCTATTGTCGCGGCTGTTGTCGATGTTGGTGCTCACTTGGCTGTCGCCT
GGTCCGTCCGTTCTGTTCCGTGGTATCATTTCAACAGCACTCACCCGTTC
CTCCGCGCGTACCAAACGACACACTCACGAAGATTTCATCCACGCTTCCC back to topprotein sequence of rna1110 >rna1110-protein ID=rna1110-protein|Name=rna1110|organism=Nannochloropsis gaditana|type=polypeptide|length=688bp
MGCLVSSMLDSFLPVHFFLICFIPHLTEQLLAYYCSCCLGSHPFFLRATM
LEYDDSAFYYFCMTMLSFYMLPGTYYLIFKQLLPSLIPSTDSDLVARTEV
ERRKAKQLKEEARSSNNLKSCGLVTNAVLLVMTYGLFVFLVLRVWNDAEI
AQFDPYAILEISTDAEDRAIRKAYRSLSLKWHPDKNMGNQYAEQMFMMVR
KAYEALTDEVAKENWQKYGNPDGKQALEVSIGLPTFLLEKDNHTTILLVY
LVVLVIAIPLAVYCWYSESQQYGEKNVMHRTYNDYAALLAEATPARYLPS
ILVTSNECVKANASSKASASPSPPPASAAGAVNGFAGMDPAEAEDLRRLV
TALGPTRLVKPKHEKHLKALAEVTKGNVLLHAYLYRLDIPPRFRPNLRKM
LLLSGDLIEAMLEILQKTRWLQTALGVLDLQQQLTQAIMVREPSDALYQL
PHLTATEVGHITKGKGSVKSISDYCRLPDDQKKGLATMTEGEKTDVLQVC
KLLPRVEVSTEVGVEDESEIAEGDLVTVKVSVTRVNLPEGASAGAVHAPY
FPATRREGWWVILAHGQKVIIAMERVENDARTFTHELKVFGPGMPLEAGH
YKFDLYVKSDCYVGLDVAQKVEFDVIKASELPEYVPHKDDLELDNEPTLF
ESLAGNLEDDSDSDLEMEEEEEGEEGEGPKDGVAKKDD back to topmRNA from alignment at CM002456.1:1208380..1211268- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1110 ID=rna1110|Name=rna1110|organism=Nannochloropsis gaditana|type=mRNA|length=2889bp|location=Sequence derived from alignment at CM002456.1:1208380..1211268- (Nannochloropsis gaditana)
ACGGCCCTCCTTCCATTGAAGACACGAGTAGTTTGTTTTACATGCACAAC
ACACAGCCCCGCCATTCACACAACCCGTGGATGAAGCGTGATCATCTTGA
GATATGAGAGCACATGGGGTGCCTAGTCTCAAGTATGCTGGATTCCTTCC
TCCCTGTCCACTTTTTTCTCATATGCTTCATCCCACATCTTACAGAGCAA
CTCTTAGCTTACTACTGCTCCTGTTGCCTGGGGTCTCACCCCTTCTTCCT
CCGTGCAACCATGTTGGAATACGACGATTCGGCGTTCTATTATTTCTGCA
TGACCATGCTTAGCTTCTACATGCTTCCAGGCACTTATTATCTAATATTT
AAGCAACTTCTTCCGTCGCTTATCCCCTCTACGGACTCGGATTTAGTCGC
GCGCACCGAAGTAGAACGCCGCAAGGCTAAGCAGTTAAAAGAAGAAGCAC
GGAGTAGCAATAACCTCAAATCCTGCGGCTTGGTGACAAACGCAGTGCTG
CTTGTTATGACCTACGGGTTGTTCGTCTTCCTCGTCCTGCGGGTCTGGAA
CGATGCGGAAATCGCCCAATTCGACCCGTACGCAATATTGGAAATAAGCA
CGGACGCGGAGGACCGTGCCATTCGTAAAGCCTACCGTTCGCTTTCCCTG
AAATGGCATCCGGACAAAAACATGGGGAACCAGTACGCCGAGCAGATGTT
CATGATGGTGCGGAAGGCCTACGAAGCCCTGACGGATGAGGTGGCGAAGG
AGAACTGGCAAAAATACGGCAATCCGGACGGGAAACAAGCTTTGGAAGTG
TCGATCGGCCTTCCCACCTTCCTCTTGGAAAAAGACAACCACACGACGAT
CCTTCTTGTGTATCTGGTCGTGCTGGTGATTGCCATCCCGCTGGCCGTGT
ACTGCTGGTACTCGGAGTCTCAACAATACGGAGAGAAGAATGTGATGCAC
CGAACCTACAACGATTATGCTGCCTTGCTCGCGGAAGCCACTCCTGCCCG
CTACCTTCCCTCCATCCTCGTCACCTCGAATGAGTGCGTCAAGGCCAACG
CCTCCTCCAAAGCTTCTGCCTCGCCTTCTCCTCCCCCAGCCTCCGCCGCG
GGTGCGGTAAACGGTTTCGCCGGCATGGACCCTGCGGAGGCCGAAGACCT
ACGCCGCCTAGTAACTGCCTTGGGTCCGACACGCTTGGTCAAGCCCAAGC
ACGAGAAACACCTCAAAGCGCTGGCGGAGGTGACCAAGGGCAACGTCCTT
CTCCATGCCTATCTCTACCGGCTCGACATTCCCCCCCGCTTTCGACCAAA
TTTGCGGAAGATGCTGCTACTCTCCGGGGACCTGATCGAGGCCATGCTTG
AAATCTTGCAGAAGACGCGGTGGCTGCAAACGGCGCTGGGTGTCCTCGAC
CTCCAACAGCAACTCACGCAAGCCATCATGGTACGGGAGCCGTCCGATGC
CCTTTACCAACTTCCCCACCTGACGGCCACGGAGGTGGGGCATATCACCA
AGGGCAAAGGCTCCGTGAAGTCTATTTCGGACTACTGCCGGCTGCCTGAC
GACCAGAAGAAGGGGCTCGCCACCATGACCGAGGGCGAGAAGACCGATGT
CTTGCAGGTGTGCAAGCTGCTGCCCCGGGTGGAGGTATCGACGGAGGTAG
GGGTGGAGGACGAGTCCGAGATCGCGGAGGGAGATTTGGTAACCGTCAAG
GTATCCGTCACCCGTGTGAATTTGCCGGAAGGGGCATCAGCGGGGGCGGT
GCACGCGCCATACTTCCCCGCGACGCGCAGAGAAGGATGGTGGGTCATAC
TCGCCCACGGTCAGAAAGTAATCATTGCCATGGAGCGGGTGGAGAATGAT
GCGCGCACGTTTACGCACGAGTTGAAAGTGTTCGGGCCCGGCATGCCCTT
GGAAGCGGGGCACTACAAGTTCGATTTGTACGTGAAAAGCGACTGCTATG
TGGGTCTGGACGTGGCGCAGAAGGTGGAGTTCGACGTGATCAAGGCCTCG
GAACTACCAGAGTACGTCCCACATAAGGATGATCTGGAGCTGGACAACGA
GCCAACGCTGTTTGAGTCCCTGGCGGGCAACCTGGAGGACGACTCGGACT
CGGATTTGGAGATGGAGGAGGAGGAGGAGGGGGAGGAAGGAGAGGGTCCA
AAGGATGGGGTAGCGAAGAAAGACGATTAATGAGGAAGAAATATACAGCT
GAAAGGGAAGGGGTGTTTGGGAAGCGTGGATGAAATCTTCGTGAGTGTGT
CGTTTGGTACGCGCGGAGGAACGGGTGAGTGCTGTTGAAATGATACCACG
GAACAGAACGGACGGACCAGGCGACAGCCAAGTGAGCACCAACATCGACA
ACAGCCGCGACAATAGAAACCGCAAATTAACCCAAGTTCTGACTTGAGGA
GACAGAAGCATTGTTTTTCCAGGCCTTTGAGCGCTCCATATCCCCTGTCC
ACCCGCTTCGTTCAGCTCGGGGGTCCGCTCGCAAACCCCCCCCCCCTCCC
CTAAGGTCTTTGTCAACATTTTCCTCAGACCATCAGCCTCCAACATACCA
ACCCTTTCAAACCGACGCCCCCTCAGCCCAGACCTGGGGGCGGGGGCAGC
ACAGCCTTGGTCGGTCCGTTCGAGGTCGAGGTGGACGTTCGTGGAGGGAA
GGTGACCTGAGGGGCATAAGGGTCCGTCCCGATCCTTTGTGTGTAGCCCG
CCGCAGTAGCAACCGCAGCCGCCACCTCGGACGCCAGCGCACCTGATGCA
GGGTTGAGCTCAGGCCTCGCACTTCGTCGTTGCCCAAATACGTGCCCGCA
GCATTCGCAGCAAGCCTCTTGATGGCCCATCCGCTCTGCCTCCACAGCAT
AGGAGCAGACCGGACAAAGGAGACCCGGCGTTTGGGATG back to topCoding sequence (CDS) from alignment at CM002456.1:1208380..1211268- >rna1110 ID=rna1110|Name=rna1110|organism=Nannochloropsis gaditana|type=CDS|length=2067bp|location=Sequence derived from alignment at CM002456.1:1208380..1211268- (Nannochloropsis gaditana)
ATGGGGTGCCTAGTCTCAAGTATGCTGGATTCCTTCCTCCCTGTCCACTT
TTTTCTCATATGCTTCATCCCACATCTTACAGAGCAACTCTTAGCTTACT
ACTGCTCCTGTTGCCTGGGGTCTCACCCCTTCTTCCTCCGTGCAACCATG
TTGGAATACGACGATTCGGCGTTCTATTATTTCTGCATGACCATGCTTAG
CTTCTACATGCTTCCAGGCACTTATTATCTAATATTTAAGCAACTTCTTC
CGTCGCTTATCCCCTCTACGGACTCGGATTTAGTCGCGCGCACCGAAGTA
GAACGCCGCAAGGCTAAGCAGTTAAAAGAAGAAGCACGGAGTAGCAATAA
CCTCAAATCCTGCGGCTTGGTGACAAACGCAGTGCTGCTTGTTATGACCT
ACGGGTTGTTCGTCTTCCTCGTCCTGCGGGTCTGGAACGATGCGGAAATC
GCCCAATTCGACCCGTACGCAATATTGGAAATAAGCACGGACGCGGAGGA
CCGTGCCATTCGTAAAGCCTACCGTTCGCTTTCCCTGAAATGGCATCCGG
ACAAAAACATGGGGAACCAGTACGCCGAGCAGATGTTCATGATGGTGCGG
AAGGCCTACGAAGCCCTGACGGATGAGGTGGCGAAGGAGAACTGGCAAAA
ATACGGCAATCCGGACGGGAAACAAGCTTTGGAAGTGTCGATCGGCCTTC
CCACCTTCCTCTTGGAAAAAGACAACCACACGACGATCCTTCTTGTGTAT
CTGGTCGTGCTGGTGATTGCCATCCCGCTGGCCGTGTACTGCTGGTACTC
GGAGTCTCAACAATACGGAGAGAAGAATGTGATGCACCGAACCTACAACG
ATTATGCTGCCTTGCTCGCGGAAGCCACTCCTGCCCGCTACCTTCCCTCC
ATCCTCGTCACCTCGAATGAGTGCGTCAAGGCCAACGCCTCCTCCAAAGC
TTCTGCCTCGCCTTCTCCTCCCCCAGCCTCCGCCGCGGGTGCGGTAAACG
GTTTCGCCGGCATGGACCCTGCGGAGGCCGAAGACCTACGCCGCCTAGTA
ACTGCCTTGGGTCCGACACGCTTGGTCAAGCCCAAGCACGAGAAACACCT
CAAAGCGCTGGCGGAGGTGACCAAGGGCAACGTCCTTCTCCATGCCTATC
TCTACCGGCTCGACATTCCCCCCCGCTTTCGACCAAATTTGCGGAAGATG
CTGCTACTCTCCGGGGACCTGATCGAGGCCATGCTTGAAATCTTGCAGAA
GACGCGGTGGCTGCAAACGGCGCTGGGTGTCCTCGACCTCCAACAGCAAC
TCACGCAAGCCATCATGGTACGGGAGCCGTCCGATGCCCTTTACCAACTT
CCCCACCTGACGGCCACGGAGGTGGGGCATATCACCAAGGGCAAAGGCTC
CGTGAAGTCTATTTCGGACTACTGCCGGCTGCCTGACGACCAGAAGAAGG
GGCTCGCCACCATGACCGAGGGCGAGAAGACCGATGTCTTGCAGGTGTGC
AAGCTGCTGCCCCGGGTGGAGGTATCGACGGAGGTAGGGGTGGAGGACGA
GTCCGAGATCGCGGAGGGAGATTTGGTAACCGTCAAGGTATCCGTCACCC
GTGTGAATTTGCCGGAAGGGGCATCAGCGGGGGCGGTGCACGCGCCATAC
TTCCCCGCGACGCGCAGAGAAGGATGGTGGGTCATACTCGCCCACGGTCA
GAAAGTAATCATTGCCATGGAGCGGGTGGAGAATGATGCGCGCACGTTTA
CGCACGAGTTGAAAGTGTTCGGGCCCGGCATGCCCTTGGAAGCGGGGCAC
TACAAGTTCGATTTGTACGTGAAAAGCGACTGCTATGTGGGTCTGGACGT
GGCGCAGAAGGTGGAGTTCGACGTGATCAAGGCCTCGGAACTACCAGAGT
ACGTCCCACATAAGGATGATCTGGAGCTGGACAACGAGCCAACGCTGTTT
GAGTCCCTGGCGGGCAACCTGGAGGACGACTCGGACTCGGATTTGGAGAT
GGAGGAGGAGGAGGAGGGGGAGGAAGGAGAGGGTCCAAAGGATGGGGTAG
CGAAGAAAGACGATTAA back to top
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