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Properties
| Property Name | Value |
|---|
| Product | putative transporter |
| Orig transcript id | gnl|cribi|Naga_100033g34.8401.mrna |
| Orig protein id | gnl|cribi|Naga_100033g34.8401 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:294248..296135 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna110 ID=rna110|Name=rna110|organism=Nannochloropsis gaditana|type=mRNA|length=2016bp
ATGACGAGAAACAAAAGCCTATTGATGCATCGGACGAGAAATCGAGAGGG
AACGTCATGTTCGCGACCGCATCGATATCCTCCCTGTAGGGGATACTGTC
CTGGAATATCGTCGCCGTCGAACCCTCCCTCGTCTCTGTCTCAGGAGAAC
TTGTGGCAGCATATCTACACAAGCAGGTCATCGATGGATGAACGTCGAGT
GGGCGTGCTGGGAGGAGGCCAGCTTGGCCGCATGATGGCCGAAGCAGGGC
ATCGGTTGGGTATTCACTTGAACATCCTCGACCCTGCGGGGAAGGCCTCG
CCTGCAGGGCAGGTGGCGAGTACGAGTATCGAGGGTAGCTTCCGAGACGA
AGAAAAGGTGCTGGAATTGGCAAGTATCTCCGACCTACTGACGGTCGAAA
TTGAGCATGTGAATTGTGAGGCTTTGGACGCAGCCATCGCGGCAGGTACC
CCTGTTCAGCCCCTTCCGCAAACAATACGGGTCATTCAAGACAAATTTCA
GCAGAAAGTCTACTTGCAGGCGCGAGGTGTGCCGTTGCCAGAATTTTGCG
ACGTCCCCACATTAGAAGCAGCTTATGAGGCGGGCCGGATATTTGGGTAC
CCACTGATGCTGAAAGCGAAGCGGTTGGCCTATGATGGCAAAGGCAACGC
GATCGCAAAGACCAAGGACGATGTGGCTGCCGCCTTTGAACAGCTTGGAG
GGAGGGACGTGTACGCCGAGAAGTGGGCTCCTTTTAGGAAAGAACTGGCG
GTGATGGTAGTACGGTCCGCCACAGAAGTGCGTCCTTACCCAGTGGTGGA
AACAGTGCAGAAGGATAATATTTGCCATACTACAATAACACCCGCGCAAA
TCTCAGCGGCAGCGAGTAAGAAAGCCATGGAAGTTGCATCGGAGGCAATC
GCTGCGTTGGAAGGAACGGGCATATTCGGCGTGGAGCTCTTCCTCATGCC
CGATGATTCGATTCTCCTGAACGAGATCGCCCCCCGCCCCCACAATTCAG
GCCACTACACGATGGAAGCCTGCGAGACGGATCAGTTCGAAAATCATCTT
CGCGCCATTTTGGGCTTACCGTTGGGGGGCACCGCCCTCAAGGTGGGAGC
GGCAGTCATGTTGAACATCTTGGGGGAAGGGAGTACGGCAGAGACCAAGA
TGATGATGGAAAAGGCCCTAGCCATCCCTGGCGCGGGGATCCACTGGTAC
GGGAAGGGCGAGGCCAAGAAGGGCCGGAAGATGGCCCATATTACCTTCAC
AGGTCCCTCCCTCTTTGAAATACAGGCCCGTGCTTCGGCGTACGGGCTGC
TCGCCTCCTTTTCTCTGGCCTCGGCGGTCGGGATCATCATGGGGTCCGAC
TCGGATCTTCCCACCATGAAAGACGCCGCGGGCGTCCTGGAAACCTTCGG
GGTGAATTACGAGCTGACCATCGTCTCGGCGCACAGGACCCCGGGACGCA
TGTATGAATACGCGCGAAATGCAGTGCAGAGAGGGTTGCGAGTCATCATT
GCTGGGGCGGGGGGGGCTGCGCATCTTCCAGGTATGGTAGCAGCGCTCAC
CCCTCTTCCCGTGATCGGGGTGCCCGTGAAATCCTCGACTTTGTCAGGCG
TGGACTCGTTGTACTCCATTTGCCAAATGCCCAAAGGGGTCCCGGTCGCG
ACAGTGGCGATCGGAAACGCTGCGAACGCGGGGTTGCTGGCAGTGAGGAT
CTTGGGGAGCGGGGAGCGGGATATTTTGGAAAAGATGGAGGGCTGGCTGC
GGGAGCAGGAGGGACAAGTACTGGTCAAGGCGGAGAGACTGGAAAAAAAT
GGTTGGAAGGAGTATTTAGGGACCCCCAAGGCCCGCGTGGGTGGTCAAGG
CACAGACATTCGAGGAGATGTGGTCGGTGGTGGGATCGAAGGATCAGGCC
ATGTTTATGGCATCCAAAGCTTTTATCTTAAAAAAATACGCATACGCATG
GAACATGCGAGCGAGTCGATGGTATGGCTCCTTGGTTCCAAAATTTGCCG
GGACTGCCAGATTTAA back to topprotein sequence of rna110 >rna110-protein ID=rna110-protein|Name=rna110|organism=Nannochloropsis gaditana|type=polypeptide|length=587bp
MPLPLFVKQDSNVRSKAAPHHVNEGRTRPVHVFRSLLTGVALLGLATAIA
CVTTSDPVERTLTGTFVSCIVLAAIAYKEVLFSLGSMSFGSKTYDARKVD
ATSASLVLSPVQQQEFDNFQRRFLMVQLLATFVDFLQGPYLYKLYENYNY
DMNDIATLYLLGFCSSALSSPFAGILADMYGRRLGCMAFAVLQTASCLLL
HYPSFALLAMGRVLSGIATSFLSTCFEAWMISEHNRRSFPPALLTNTFSI
YVFMMGVAAVASGGVAGLAQEQGGVLAAFDVCAAAALGLAILIPLLWTEE
NYGSGRKGESGLRKTLVENAPTSIVDPSSVPAAAPPSTSPSWVPDSPNFL
SRKTFPRGLLNILEDGKREVVWLGLTQAFFEAAMFTWVFMWTPSLDTGEI
PSLNLGLVFATLMLGVMCGSSVFRILTGDGGEGKGWKGGGGWSPETVLRG
SLALGGVVLGIASWPRLSAKWLLVLFTIFEASVGVYFAAMGTIRARIIPE
EVRATVMNLIRLVLNLLVVSMYIGPVRLALPIEEKRPLVLGLCSAMIFIA
SVCHAQLLVGREMHGEEQKTADEKISHVERTDSHKAQ back to topmRNA from alignment at CM002455.1:294248..296135- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna110 ID=rna110|Name=rna110|organism=Nannochloropsis gaditana|type=mRNA|length=1888bp|location=Sequence derived from alignment at CM002455.1:294248..296135- (Nannochloropsis gaditana)
ATGCCCCTACCTTTGTTTGTTAAGCAAGATTCTAATGTGCGATCGAAGGC
CGCTCCACACCATGTCAATGAGGGGAGGACCCGCCCTGTGCATGTCTTCA
GAAGTCTACTGACAGGCGTCGCCCTCCTTGGTCTGGCCACAGCTATTGCT
TGTGTCACCACGAGTGATCCGGTTGAGCGCACCCTGACAGGGACGTTCGT
ATCATGCATAGTTCTGGCTGCGATAGCGTACAAGGAGGTCCTCTTCTCGC
TAGGAAGTATGTCATTCGGAAGCAAGACTTACGATGCAAGAAAAGTTGAC
GCAACTTCTGCATCGCTGGTATTAAGTCCAGTGCAGCAGCAGGAGTTTGA
CAATTTCCAAAGGCGGTTTTTAATGGTGCAATTGCTGGCGACTTTTGTGG
ATTTTCTTCAGGGGCCATACCTGTACAAGCTGTACGAAAACTACAACTAT
GACATGGTAGGTGCGAAAAGCATTGACCAGTGGAATGCCGCGCATTACTA
TTTTGATCAAATATTGACTTAATTTTTGCTCGACTGGTGTCTGACGCATG
CCTGCGCCCTCTTCCTGTCCCCTTCTGTAGAACGACATCGCGACCCTGTA
CCTGCTCGGTTTCTGCTCCTCCGCCCTCTCCTCCCCCTTCGCGGGCATCC
TTGCCGACATGTACGGCCGGCGCCTTGGATGCATGGCCTTTGCCGTCCTC
CAGACCGCCTCGTGCCTTCTGCTTCACTACCCCTCCTTCGCGCTCCTGGC
CATGGGCCGCGTGCTCTCGGGCATTGCCACGTCCTTCTTGTCGACCTGCT
TTGAAGCCTGGATGATCTCGGAGCACAACCGGCGTTCCTTTCCCCCGGCT
CTCCTGACCAATACCTTCTCCATTTACGTCTTCATGATGGGGGTGGCGGC
GGTGGCCAGTGGGGGGGTGGCGGGGCTAGCGCAGGAACAGGGCGGGGTAC
TGGCCGCCTTTGATGTGTGTGCCGCCGCCGCGCTCGGGCTGGCAATACTC
ATCCCTCTGCTTTGGACGGAAGAGAACTATGGCAGTGGAAGGAAAGGGGA
GAGCGGCTTGAGGAAAACATTGGTGGAAAATGCGCCCACGTCCATAGTGG
ATCCAAGTTCAGTACCTGCGGCTGCTCCTCCCAGCACTTCCCCTTCCTGG
GTACCCGACTCCCCCAATTTTTTATCTCGAAAGACTTTCCCTCGCGGTTT
GCTCAATATTCTAGAAGATGGCAAAAGAGAGGTTGTCTGGCTGGGGCTGA
CGCAAGCGTTTTTTGAAGCTGCAATGTTCACTTGGGTCTTCATGTGGACC
CCCTCCCTTGACACGGGCGAGATCCCCTCCTTGAACCTTGGCCTTGTCTT
CGCCACTCTCATGCTAGGAGTCATGTGCGGGTCCTCTGTCTTTCGGATTT
TGACAGGGGATGGAGGGGAAGGGAAGGGATGGAAAGGAGGAGGGGGTTGG
AGTCCAGAAACTGTACTACGTGGTTCGTTAGCATTGGGCGGAGTCGTGTT
GGGGATCGCATCTTGGCCACGACTGTCAGCTAAGTGGCTTCTAGTCTTAT
TCACAATCTTTGAAGCGTCGGTTGGTGTGTATTTTGCTGCGATGGGCACT
ATACGCGCACGTATTATACCTGAAGAAGTGCGAGCAACGGTTATGAATCT
TATCCGCCTCGTTCTGAACCTGTTGGTTGTATCCATGTACATAGGCCCTG
TGCGACTGGCACTTCCAATAGAGGAGAAGAGACCGCTGGTATTGGGTCTG
TGCAGTGCCATGATTTTTATCGCCAGTGTATGTCATGCTCAGTTGTTAGT
TGGGAGGGAGATGCATGGTGAAGAACAGAAAACGGCGGATGAAAAAATCA
GCCATGTAGAACGTACAGACTCGCATAAAGCACAATAA back to topCoding sequence (CDS) from alignment at CM002455.1:294248..296135- >rna110 ID=rna110|Name=rna110|organism=Nannochloropsis gaditana|type=CDS|length=3528bp|location=Sequence derived from alignment at CM002455.1:294248..296135- (Nannochloropsis gaditana)
AACGACATCGCGACCCTGTACCTGCTCGGTTTCTGCTCCTCCGCCCTCTC
CTCCCCCTTCGCGGGCATCCTTGCCGACATGTACGGCCGGCGCCTTGGAT
GCATGGCCTTTGCCGTCCTCCAGACCGCCTCGTGCCTTCTGCTTCACTAC
CCCTCCTTCGCGCTCCTGGCCATGGGCCGCGTGCTCTCGGGCATTGCCAC
GTCCTTCTTGTCGACCTGCTTTGAAGCCTGGATGATCTCGGAGCACAACC
GGCGTTCCTTTCCCCCGGCTCTCCTGACCAATACCTTCTCCATTTACGTC
TTCATGATGGGGGTGGCGGCGGTGGCCAGTGGGGGGGTGGCGGGGCTAGC
GCAGGAACAGGGCGGGGTACTGGCCGCCTTTGATGTGTGTGCCGCCGCCG
CGCTCGGGCTGGCAATACTCATCCCTCTGCTTTGGACGGAAGAGAACTAT
GGCAGTGGAAGGAAAGGGGAGAGCGGCTTGAGGAAAACATTGGTGGAAAA
TGCGCCCACGTCCATAGTGGATCCAAGTTCAGTACCTGCGGCTGCTCCTC
CCAGCACTTCCCCTTCCTGGGTACCCGACTCCCCCAATTTTTTATCTCGA
AAGACTTTCCCTCGCGGTTTGCTCAATATTCTAGAAGATGGCAAAAGAGA
GGTTGTCTGGCTGGGGCTGACGCAAGCGTTTTTTGAAGCTGCAATGTTCA
CTTGGGTCTTCATGTGGACCCCCTCCCTTGACACGGGCGAGATCCCCTCC
TTGAACCTTGGCCTTGTCTTCGCCACTCTCATGCTAGGAGTCATGTGCGG
GTCCTCTGTCTTTCGGATTTTGACAGGGGATGGAGGGGAAGGGAAGGGAT
GGAAAGGAGGAGGGGGTTGGAGTCCAGAAACTGTACTACGTGGTTCGTTA
GCATTGGGCGGAGTCGTGTTGGGGATCGCATCTTGGCCACGACTGTCAGC
TAAGTGGCTTCTAGTCTTATTCACAATCTTTGAAGCGTCGGTTGGTGTGT
ATTTTGCTGCGATGGGCACTATACGCGCACGTATTATACCTGAAGAAGTG
CGAGCAACGGTTATGAATCTTATCCGCCTCGTTCTGAACCTGTTGGTTGT
ATCCATGTACATAGGCCCTGTGCGACTGGCACTTCCAATAGAGGAGAAGA
GACCGCTGGTATTGGGTCTGTGCAGTGCCATGATTTTTATCGCCAGTGTA
TGTCATGCTCAGTTGTTAGTTGGGAGGGAGATGCATGGTGAAGAACAGAA
AACGGCGGATGAAAAAATCAGCCATGTAGAACGTACAGACTCGCATAAAG
CACAATAAATGCCCCTACCTTTGTTTGTTAAGCAAGATTCTAATGTGCGA
TCGAAGGCCGCTCCACACCATGTCAATGAGGGGAGGACCCGCCCTGTGCA
TGTCTTCAGAAGTCTACTGACAGGCGTCGCCCTCCTTGGTCTGGCCACAG
CTATTGCTTGTGTCACCACGAGTGATCCGGTTGAGCGCACCCTGACAGGG
ACGTTCGTATCATGCATAGTTCTGGCTGCGATAGCGTACAAGGAGGTCCT
CTTCTCGCTAGGAAGTATGTCATTCGGAAGCAAGACTTACGATGCAAGAA
AAGTTGACGCAACTTCTGCATCGCTGGTATTAAGTCCAGTGCAGCAGCAG
GAGTTTGACAATTTCCAAAGGCGGTTTTTAATGGTGCAATTGCTGGCGAC
TTTTGTGGATTTTCTTCAGGGGCCATACCTGTACAAGCTGTACGAAAACT
ACAACTATGACATGAACGACATCGCGACCCTGTACCTGCTCGGTTTCTGC
TCCTCCGCCCTCTCCTCCCCCTTCGCGGGCATCCTTGCCGACATGTACGG
CCGGCGCCTTGGATGCATGGCCTTTGCCGTCCTCCAGACCGCCTCGTGCC
TTCTGCTTCACTACCCCTCCTTCGCGCTCCTGGCCATGGGCCGCGTGCTC
TCGGGCATTGCCACGTCCTTCTTGTCGACCTGCTTTGAAGCCTGGATGAT
CTCGGAGCACAACCGGCGTTCCTTTCCCCCGGCTCTCCTGACCAATACCT
TCTCCATTTACGTCTTCATGATGGGGGTGGCGGCGGTGGCCAGTGGGGGG
GTGGCGGGGCTAGCGCAGGAACAGGGCGGGGTACTGGCCGCCTTTGATGT
GTGTGCCGCCGCCGCGCTCGGGCTGGCAATACTCATCCCTCTGCTTTGGA
CGGAAGAGAACTATGGCAGTGGAAGGAAAGGGGAGAGCGGCTTGAGGAAA
ACATTGGTGGAAAATGCGCCCACGTCCATAGTGGATCCAAGTTCAGTACC
TGCGGCTGCTCCTCCCAGCACTTCCCCTTCCTGGGTACCCGACTCCCCCA
ATTTTTTATCTCGAAAGACTTTCCCTCGCGGTTTGCTCAATATTCTAGAA
GATGGCAAAAGAGAGGTTGTCTGGCTGGGGCTGACGCAAGCGTTTTTTGA
AGCTGCAATGTTCACTTGGGTCTTCATGTGGACCCCCTCCCTTGACACGG
GCGAGATCCCCTCCTTGAACCTTGGCCTTGTCTTCGCCACTCTCATGCTA
GGAGTCATGTGCGGGTCCTCTGTCTTTCGGATTTTGACAGGGGATGGAGG
GGAAGGGAAGGGATGGAAAGGAGGAGGGGGTTGGAGTCCAGAAACTGTAC
TACGTGGTTCGTTAGCATTGGGCGGAGTCGTGTTGGGGATCGCATCTTGG
CCACGACTGTCAGCTAAGTGGCTTCTAGTCTTATTCACAATCTTTGAAGC
GTCGGTTGGTGTGTATTTTGCTGCGATGGGCACTATACGCGCACGTATTA
TACCTGAAGAAGTGCGAGCAACGGTTATGAATCTTATCCGCCTCGTTCTG
AACCTGTTGGTTGTATCCATGTACATAGGCCCTGTGCGACTGGCACTTCC
AATAGAGGAGAAGAGACCGCTGGTATTGGGTCTGTGCAGTGCCATGATTT
TTATCGCCAGTGTATGTCATGCTCAGTTGTTAGTTGGGAGGGAGATGCAT
GGTGAAGAACAGAAAACGGCGGATGAAAAAATCAGCCATGTAGAACGTAC
AGACTCGCATAAAGCACAATAAATGCCCCTACCTTTGTTTGTTAAGCAAG
ATTCTAATGTGCGATCGAAGGCCGCTCCACACCATGTCAATGAGGGGAGG
ACCCGCCCTGTGCATGTCTTCAGAAGTCTACTGACAGGCGTCGCCCTCCT
TGGTCTGGCCACAGCTATTGCTTGTGTCACCACGAGTGATCCGGTTGAGC
GCACCCTGACAGGGACGTTCGTATCATGCATAGTTCTGGCTGCGATAGCG
TACAAGGAGGTCCTCTTCTCGCTAGGAAGTATGTCATTCGGAAGCAAGAC
TTACGATGCAAGAAAAGTTGACGCAACTTCTGCATCGCTGGTATTAAGTC
CAGTGCAGCAGCAGGAGTTTGACAATTTCCAAAGGCGGTTTTTAATGGTG
CAATTGCTGGCGACTTTTGTGGATTTTCTTCAGGGGCCATACCTGTACAA
GCTGTACGAAAACTACAACTATGACATG back to top
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