rna1096, rna1096 (mRNA) Nannochloropsis gaditana

Overview
Namerna1096
Unique Namerna1096
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1851
Alignment locationCM002456.1:1172803..1173015 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100006g71.8627.mrna
Orig protein idgnl|cribi|Naga_100006g71.8627
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1172803..1173015 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100006g71gene1056Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29538.1cds1095Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna1096rna1096-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna1096 ID=rna1096|Name=rna1096|organism=Nannochloropsis gaditana|type=mRNA|length=1851bp
ATGGTTGGCTCGAATCCTACAGCGACAGAGCTTCCTATTATCACTCTAAC
GGAGGTTGAGTCGCATTTGTTTGGTTTGCTCAACGAAGCAGCGGCGCAAG
TGGGGCAGGGCACTGTGCTGAGGGTGGCTGGGGGTTGGGTGCGTGACAAA
CTCCTGGGAAAGGAGAGCGATGACGTGGACATCGCCCTAGATAACGTATC
TGGTGCTGCCTTTGCGGAATTGCTGAACAAATGCCTGCAGGACAAGGGAC
TGGAGACCCGATCCATTGGCGTCATTCAAGCGAATCCCGAGCAATCGAAG
CATCTGGAGACGGCGCGTGTACTTGTTCTGGGACACTGGATAGATTTTAC
CAATTTACGGACGGAGACATATCGAGCTGACAGTCGCATCCCTGAAATAA
GTTTTGGGACTGCTGTGGAAGATGCTTCTCGACGGGATTTTACCATTAAC
TCCTTGTTTTATAACCTCCAGACTGAATCGGTCGAGGATTGGACGGGCCA
AGGTTTGGCGGATCTCTTGGGGCCTGCTGGTGCTATTCGAACGCCTTTGC
CTGCGCTGACTACATTTTTGGATGATCCTCTGCGTTTGCTGCGCGCAATT
CGATTCTCGTCTCGATTCGCTTTGCCGTTGGATGCAAACATTGTGGCAGC
GGCCGAAAACGAGGAACTGCAACATGCCTTGTTCGGAAAAGTCAGTCGCG
AGCGTGTGGGGCTAGAAGTGGAAGGGATGCTTTCCGGAAAAGACGCGCGG
CCTGCCGTGGCGCTCGAGATGCTGGTGAATCTGGGGTTAAGCGACGTGGT
TTTTTGGATGCCAGAGGAGGTGAAGACGCGGGTGCTACCGGTGGGCGGGA
TGGAGGGATGGGCACAAAGAGGGCTTGCTAACGTGCGGATGGCGAACGCG
TTGTTGATGGAGAGGGAAAAACCGGGAATATGGCGCGACATTGCGGAAGG
CGGCACCGAGGGCAGCATGCAAGGCGCACAGGGCTCGATCCAGGGGTTTA
TGCAGGTTGTACGAGTCACCAGCGCCTACATGCAACCTCGACGAGAGCAT
CGCTTGTGTTTCCTCGCCGCGATGCTGGCGCCCTGGGAGAAGCACTGCAT
GACCGAGGATAGAAAACCTGTGGAGAAAAAGATAGGGGTCGTCCAATGGT
TCGTCCGGGAGGCCTTGAAGCACCGAGCCAAGGACGCGGAGGACCTGACC
GCGTTGTTCGGCGCGCTCGATCGCTGTCAGTCTTTGACGGAAACCATGGG
GGCATGGTCAGGGCGGGCGACGGGGCAAGAAGGCCGCAAGGTACAGAAGA
TGAGGCCCGGGGACGCTTGCGGGACCCGGGACGTAGAGAGGCGCCGTTCC
GAGGAGCAGGACAATCGATGGAGGGCGGCAAGATTGGAAGCGGGAAGGTT
GCTAAGAGATCTGAAGGGCTTGTGGAGGACCGGGCTTGATGTGGCTTGTG
CGCGGGAGTGTGCGTCGTTAAAAGGAGGGGAGAATCCGACCACAGAGTCT
CCCTCGAAGCGGGCATGCGACATCTCGGTCACCTTGAAAGCTCTTTATGA
AGTGCAAAACCGTTATCAGCATACCATCGACGCTGTGCAAGGCATGGGCT
TAGATGGAATTTGGAATTTGCGACCGTTACTGGACGGCAAGGCCGTCATC
AGCAATCTGGGCCTCCCGAAGGGCCCTCTCGTGGGTGCGGTCATGGACGC
TCAGATTGAGTGGCAGCTTCAACATCCACGTGGGAATGCGGAGGAGCTTA
CGAAGCATCTACAGACACTTGTGGCTGAAAGGGTGATAGGGACGAGAGAT
GAGGACGGTGTGACACATAAGGCGAGGAAGGAGAAAAAAACAGGCAAGTA
A
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protein sequence of rna1096

>rna1096-protein ID=rna1096-protein|Name=rna1096|organism=Nannochloropsis gaditana|type=polypeptide|length=70bp
MEQARAGHLITTQAKQCLMVQNDCKYTASRQKSIKFSWDAAAFPQRDANT
TEHIVDPCHIDDLTWLLVRE
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mRNA from alignment at CM002456.1:1172803..1173015-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna1096 ID=rna1096|Name=rna1096|organism=Nannochloropsis gaditana|type=mRNA|length=213bp|location=Sequence derived from alignment at CM002456.1:1172803..1173015- (Nannochloropsis gaditana)
ATGGAGCAAGCGCGTGCGGGCCACTTGATAACAACTCAGGCTAAGCAATG
TTTAATGGTACAGAATGATTGCAAATACACGGCAAGCAGGCAGAAATCGA
TTAAGTTTTCCTGGGACGCCGCAGCTTTTCCTCAAAGGGATGCCAACACG
ACGGAACACATCGTGGACCCGTGCCATATCGACGACCTTACCTGGTTGCT
GGTCAGGGAGTAA
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Coding sequence (CDS) from alignment at CM002456.1:1172803..1173015-

>rna1096 ID=rna1096|Name=rna1096|organism=Nannochloropsis gaditana|type=CDS|length=213bp|location=Sequence derived from alignment at CM002456.1:1172803..1173015- (Nannochloropsis gaditana)
ATGGAGCAAGCGCGTGCGGGCCACTTGATAACAACTCAGGCTAAGCAATG
TTTAATGGTACAGAATGATTGCAAATACACGGCAAGCAGGCAGAAATCGA
TTAAGTTTTCCTGGGACGCCGCAGCTTTTCCTCAAAGGGATGCCAACACG
ACGGAACACATCGTGGACCCGTGCCATATCGACGACCTTACCTGGTTGCT
GGTCAGGGAGTAA
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Synonyms
Publications