|
|
Properties
| Property Name | Value |
|---|
| Product | cytochrome p450 |
| Orig transcript id | gnl|cribi|Naga_100006g75.8645.mrna |
| Orig protein id | gnl|cribi|Naga_100006g75.8645 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:1164860..1166801 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1092 ID=rna1092|Name=rna1092|organism=Nannochloropsis gaditana|type=mRNA|length=1960bp
GTGGTAGTCGAATGTTGGGACGATTGCTCATTCGCAAGCGGCCGAGTCCT
AACTTTGTCATTCGTCCGCCACTCGTACAACCTCCTGGCTGCCTGGTATT
ACCCTCTACAAAGCAACACTCTTCCAGCACCTCCCCCACACCCGCCCTCA
AGCATGTCTCTCTCGTCCCTGCTGACAATGACAATGAAGAACGTGAGGCG
GATTTGCGGGAGGAGCGGACTGCGCTTGGGAAAGCCTTGCTCGATCCAGC
TTGGATGCACGGGAGGCGGGCGCTTGCCGCTCCCCCTGTTGAAGGTCTCG
ACAGAATAAACGACGTCTCACGACTGCTGTCTGGCAGACAAATTCGTCTT
CATGCCAGCCGTCTCAATAGGAGCAAGCGTGAAAGCGGATTGGCTACGGA
AAGAAGTAGGAGGCCCTTAAAATTGAAAGACGGGGGCCTACAGGAAGAGG
AGGATGCGGGGGGCGAGTCGGGCGAAAGCATTGACAAGGGCACCAAAAAC
AAGAGTCATGGGCCCAAGTATGTTAAGGAGGAAAAGACAACGATTGAAGG
GCATGATGCGGAGGAAGAGAGGCAAATGATCGAGGGCGAAAGTGAAAAGC
CGGGATACACCATCCGCAAGCCCGCGTGGACGGGGCGAGTGGCTTCCCCC
CCCGAGGCGTTGGCTTACCTGTCCACTCGCTCCTTGCTGAACTTCTCGAT
CAATCTTCGCGTGCTCCGCGACGTGGCCGTTGCCGCTCGTTCGCCCCTTT
TCGCGTCGTCTGAGGCACGTCCCAGGTCGTTTTTGGACGTGGGGTGCGGG
CCGGGGAGTGCTCTCCTTGCTGCACACACCCTCTGGCCCGACATCCCGCG
GTTGGACGGCGTGGACCACAGCCAAGCCATGCAGGATCTCACCAAGCACG
TGGTCGAAACGGGGGGGAAAGACCAGGCCGGGCGGGGCGACAGGCTTGTC
CTCCATCGGCACCTCCCCCCCCTCCTCGCCCAGTCCGGGCGTTCGCAGCT
CCGCTTCGACGTGGTGTTTGCTTCATGGACCCTGTCGGAGCTCCCGTCGG
ACGCCAGCCGGGCCTTGGCCACCTCCATCATGTGGGAGCTGGTGGCGGAG
AACGGGGGCTTCCTGGTCGTGGTGGAAGATGGGTCACCGGAGGGATCTCG
GCTCGTGCGCTCGGTCAGGAAATTGGTCTTGGAGGGGGGCGATCCGGGCA
CTCAAGCAGGAACGACAGGGCCACAGGCGCGTGCTAGGACGGTGGGGCCT
TGCCAGCACGACCGTCCCTGCCCCTTGCCAAGGGAAGAATGGTGCCGTTT
TTCCCAGCGGATCCCGATCGGACGCCTGCACCGGCGGATAGGCAAGCCGG
GGTCGGGATACAAGGACGTGGCCTTCTCCTACACCATCCTCAAAAAGCTA
CCCGGCACGGGGGAGGACGGGGAAGGAGACAAGGAGGGACGGAAATGGGG
GGACGCACGGTTGGAGGCGCTGCATCGGCTTCGCTACGGCGACAGCGGGA
AGGGCGAAGAGGATGGGGCAGCATACCCGTATCGACCCAAAGACCGGGAC
TGGGAGGTGGCTCTCCAGGCTGATCCTGGCCGGGAGGGGTGGGGGCGGCT
GATCCGAAACCCGAAAAAGAAAAAGGGCCACGTGCATCTGGACTTGTGCA
CGCCCGCAGGGGAGTTGGAGCGAGTCATGGTGGCGAAAAGGGCGACCAGG
GCCTTGCCGGGGAAGTACATGGCTGCGCGGAAGGCACAGTGGGGAGGGCT
GTGGCCTTTCCCAGATGTGTGATGTGCAGGCAAGGGGGGGGGGGGTCGAA
GAGGTAAAGCAACCGACACGACGACATCGGCTTTGGGAGGAAAGGTTTGT
CGCAACACATTTCTTTAAGGTACCCGCCGCCGATGCTCAAAATTCTGACT
TTTTCTTTTGTTTTAGCAATAAGAGGTGCTGCTACCCCCATTATTTGTAC
TTTGAGACCT back to topprotein sequence of rna1092 >rna1092-protein ID=rna1092-protein|Name=rna1092|organism=Nannochloropsis gaditana|type=polypeptide|length=581bp
MAGSLAYFRRVLFDSSSRIACLSWPLFFALPRPCSRVLSTWTMPTKYIIA
EILRLMPDLESFSRPSSAEAPEISIDRDLATKVLFALIAMVATWKICLYV
DRARKIGRMNMPVVPGGLPFFGQVLELIRLPPWDLMVQWMERLGPIYRFT
LFGESCVVVADPGLLREVLQTSMKAFQKDLGFTYKPFMPLLGTGLVTSEG
QLWYTQRAMVSSVFRIEILEIIPDIAKRAVERLCTKLESVRNTDQAVEIG
EMFRHLTLQVIAEAVLSLSPEESDQTFARMYLPIVTEGNRRTWYPHRAYL
PTPAFWAFRKDVKVLNDYITSVIEKRWQLRQCEAKEPSHLPPPASAASPP
HRQHDILDRILDGVHPKTWGSATVRQIRDEIKTFILAGHETSASMLTWAL
YEATQSQGVADRVAAEAAVVFGPDASATTPLPAADKLGSLIYTQCCLKEA
LRKYSVVPIVTRETVREVSLGSGRYLIPKGTRMMILIQGVHHRKDLWPSP
LTYRPERFLKKGPEPFTFLPFIDGPRNCLGQHLALLETKIVLATLLQRFR
FEAIGGERAGRKHPSMVPVIPDDPGLMVVVR back to topmRNA from alignment at CM002456.1:1164860..1166801- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1092 ID=rna1092|Name=rna1092|organism=Nannochloropsis gaditana|type=mRNA|length=1942bp|location=Sequence derived from alignment at CM002456.1:1164860..1166801- (Nannochloropsis gaditana)
AACACATCAACGCTCTGGCACATTTTATTTATTTTTATGGCAGGTTCTCT
AGCCTATTTTAGGCGTGTTCTCTTCGACAGCTCTTCGAGGATCGCCTGTC
TCAGTTGGCCTTTGTTTTTCGCTCTGCCCCGTCCTTGCAGCCGCGTGCTG
TCCACCTGGACAATGCCCACCAAGTACATAATAGCCGAAATACTGAGGCT
CATGCCAGATCTTGAGAGTTTTTCGCGCCCATCTTCGGCTGAAGCGCCCG
AAATTAGCATCGATAGAGGTGGGTGTAGCTAGCTTAGCCAATTTCATCAA
GGCCCTAACCACTTCTTCTACTCTTGACAGATTTAGCCACCAAGGTGCTT
TTTGCACTCATCGCCATGGTTGCGACCTGGAAAATTTGTCTGTATGTGGA
TCGAGCACGCAAAATCGGGAGAATGAACATGCCCGTCGTCCCCGGTGGTC
TGCCTTTCTTTGGCCAAGTATTGGAATTAATCCGCTTGCCTCCTTGGGAT
CTTATGGTGCAATGGATGGAACGCTTAGGGCCCATCTATCGTTTCACCCT
CTTTGGAGAGAGCTGCGTAGTGGTGGCGGATCCCGGATTGCTCCGAGAGG
TGCTGCAGACAAGCATGAAAGCTTTTCAGAAGGACCTGGGCTTCACGTAC
AAGCCCTTCATGCCCCTTTTAGGAACGGGACTGGTCACATCCGAGGGCCA
GCTGTGGTACACACAACGTGCGATGGTCTCTTCTGTCTTCCGGATCGAGA
TCCTCGAGATTATTCCCGACATTGCCAAACGGGCAGTGGAGCGCTTGTGC
ACCAAGCTAGAGTCTGTCCGTAACACGGACCAGGCAGTGGAGATCGGGGA
GATGTTCCGTCACTTGACCCTCCAGGTCATTGCCGAAGCAGTGCTGAGTC
TCTCGCCCGAGGAGTCTGACCAGACCTTCGCACGCATGTATCTACCCATT
GTCACCGAGGGGAACCGCCGGACCTGGTACCCCCATCGCGCCTACCTCCC
CACCCCCGCCTTCTGGGCCTTCCGCAAAGATGTCAAAGTGCTCAACGACT
ACATCACCAGCGTCATAGAAAAACGATGGCAACTTCGCCAGTGCGAAGCG
AAAGAGCCTTCCCACCTCCCTCCCCCGGCGTCCGCTGCCTCTCCCCCCCA
CCGGCAGCACGACATCTTGGACCGCATTCTGGACGGCGTGCACCCCAAGA
CATGGGGTTCGGCGACTGTCCGACAGATCCGAGACGAGATCAAGACCTTC
ATCCTGGCCGGGCACGAGACGTCGGCCTCCATGCTGACATGGGCCCTGTA
TGAGGCCACGCAGAGCCAAGGCGTCGCGGACAGGGTCGCTGCGGAGGCCG
CCGTCGTCTTCGGCCCGGATGCCAGCGCCACGACCCCGCTCCCTGCGGCC
GATAAATTGGGAAGCTTGATCTACACGCAATGCTGCCTGAAAGAGGCCTT
GCGGAAATACAGCGTGGTTCCGATCGTGACGCGCGAGACAGTACGGGAGG
TTTCCCTGGGGTCTGGGAGATATTTGATACCCAAGGGAACGAGGATGATG
ATCTTGATCCAGGGCGTGCACCACCGGAAAGATTTGTGGCCTTCGCCGCT
CACCTACCGCCCGGAGCGCTTCCTGAAAAAAGGACCCGAGCCTTTCACCT
TCTTGCCCTTCATCGACGGCCCTCGAAACTGCTTGGGACAGCACTTGGCG
TTGCTGGAGACCAAGATCGTCCTGGCGACCCTCTTGCAGCGGTTTCGCTT
CGAGGCAATCGGGGGGGAGAGGGCCGGGAGGAAACACCCGTCCATGGTTC
CCGTGATCCCTGACGACCCCGGGTTGATGGTTGTGGTGAGATAGGGGGAG
GGAGGGAAAGCTCGCAGGGGGCATCTTAGGTCTCAAAGTACAAATAATGG
GGGTAGCAGCACCTCTTATTGCTAAAACAAAAGAAAAAGTCA back to topCoding sequence (CDS) from alignment at CM002456.1:1164860..1166801- >rna1092 ID=rna1092|Name=rna1092|organism=Nannochloropsis gaditana|type=CDS|length=3492bp|location=Sequence derived from alignment at CM002456.1:1164860..1166801- (Nannochloropsis gaditana)
ATTTAGCCACCAAGGTGCTTTTTGCACTCATCGCCATGGTTGCGACCTGG
AAAATTTGTCTGTATGTGGATCGAGCACGCAAAATCGGGAGAATGAACAT
GCCCGTCGTCCCCGGTGGTCTGCCTTTCTTTGGCCAAGTATTGGAATTAA
TCCGCTTGCCTCCTTGGGATCTTATGGTGCAATGGATGGAACGCTTAGGG
CCCATCTATCGTTTCACCCTCTTTGGAGAGAGCTGCGTAGTGGTGGCGGA
TCCCGGATTGCTCCGAGAGGTGCTGCAGACAAGCATGAAAGCTTTTCAGA
AGGACCTGGGCTTCACGTACAAGCCCTTCATGCCCCTTTTAGGAACGGGA
CTGGTCACATCCGAGGGCCAGCTGTGGTACACACAACGTGCGATGGTCTC
TTCTGTCTTCCGGATCGAGATCCTCGAGATTATTCCCGACATTGCCAAAC
GGGCAGTGGAGCGCTTGTGCACCAAGCTAGAGTCTGTCCGTAACACGGAC
CAGGCAGTGGAGATCGGGGAGATGTTCCGTCACTTGACCCTCCAGGTCAT
TGCCGAAGCAGTGCTGAGTCTCTCGCCCGAGGAGTCTGACCAGACCTTCG
CACGCATGTATCTACCCATTGTCACCGAGGGGAACCGCCGGACCTGGTAC
CCCCATCGCGCCTACCTCCCCACCCCCGCCTTCTGGGCCTTCCGCAAAGA
TGTCAAAGTGCTCAACGACTACATCACCAGCGTCATAGAAAAACGATGGC
AACTTCGCCAGTGCGAAGCGAAAGAGCCTTCCCACCTCCCTCCCCCGGCG
TCCGCTGCCTCTCCCCCCCACCGGCAGCACGACATCTTGGACCGCATTCT
GGACGGCGTGCACCCCAAGACATGGGGTTCGGCGACTGTCCGACAGATCC
GAGACGAGATCAAGACCTTCATCCTGGCCGGGCACGAGACGTCGGCCTCC
ATGCTGACATGGGCCCTGTATGAGGCCACGCAGAGCCAAGGCGTCGCGGA
CAGGGTCGCTGCGGAGGCCGCCGTCGTCTTCGGCCCGGATGCCAGCGCCA
CGACCCCGCTCCCTGCGGCCGATAAATTGGGAAGCTTGATCTACACGCAA
TGCTGCCTGAAAGAGGCCTTGCGGAAATACAGCGTGGTTCCGATCGTGAC
GCGCGAGACAGTACGGGAGGTTTCCCTGGGGTCTGGGAGATATTTGATAC
CCAAGGGAACGAGGATGATGATCTTGATCCAGGGCGTGCACCACCGGAAA
GATTTGTGGCCTTCGCCGCTCACCTACCGCCCGGAGCGCTTCCTGAAAAA
AGGACCCGAGCCTTTCACCTTCTTGCCCTTCATCGACGGCCCTCGAAACT
GCTTGGGACAGCACTTGGCGTTGCTGGAGACCAAGATCGTCCTGGCGACC
CTCTTGCAGCGGTTTCGCTTCGAGGCAATCGGGGGGGAGAGGGCCGGGAG
GAAACACCCGTCCATGGTTCCCGTGATCCCTGACGACCCCGGGTTGATGG
TTGTGGTGAGATAGATGGCAGGTTCTCTAGCCTATTTTAGGCGTGTTCTC
TTCGACAGCTCTTCGAGGATCGCCTGTCTCAGTTGGCCTTTGTTTTTCGC
TCTGCCCCGTCCTTGCAGCCGCGTGCTGTCCACCTGGACAATGCCCACCA
AGTACATAATAGCCGAAATACTGAGGCTCATGCCAGATCTTGAGAGTTTT
TCGCGCCCATCTTCGGCTGAAGCGCCCGAAATTAGCATCGATAGAGATTT
AGCCACCAAGGTGCTTTTTGCACTCATCGCCATGGTTGCGACCTGGAAAA
TTTGTCTGTATGTGGATCGAGCACGCAAAATCGGGAGAATGAACATGCCC
GTCGTCCCCGGTGGTCTGCCTTTCTTTGGCCAAGTATTGGAATTAATCCG
CTTGCCTCCTTGGGATCTTATGGTGCAATGGATGGAACGCTTAGGGCCCA
TCTATCGTTTCACCCTCTTTGGAGAGAGCTGCGTAGTGGTGGCGGATCCC
GGATTGCTCCGAGAGGTGCTGCAGACAAGCATGAAAGCTTTTCAGAAGGA
CCTGGGCTTCACGTACAAGCCCTTCATGCCCCTTTTAGGAACGGGACTGG
TCACATCCGAGGGCCAGCTGTGGTACACACAACGTGCGATGGTCTCTTCT
GTCTTCCGGATCGAGATCCTCGAGATTATTCCCGACATTGCCAAACGGGC
AGTGGAGCGCTTGTGCACCAAGCTAGAGTCTGTCCGTAACACGGACCAGG
CAGTGGAGATCGGGGAGATGTTCCGTCACTTGACCCTCCAGGTCATTGCC
GAAGCAGTGCTGAGTCTCTCGCCCGAGGAGTCTGACCAGACCTTCGCACG
CATGTATCTACCCATTGTCACCGAGGGGAACCGCCGGACCTGGTACCCCC
ATCGCGCCTACCTCCCCACCCCCGCCTTCTGGGCCTTCCGCAAAGATGTC
AAAGTGCTCAACGACTACATCACCAGCGTCATAGAAAAACGATGGCAACT
TCGCCAGTGCGAAGCGAAAGAGCCTTCCCACCTCCCTCCCCCGGCGTCCG
CTGCCTCTCCCCCCCACCGGCAGCACGACATCTTGGACCGCATTCTGGAC
GGCGTGCACCCCAAGACATGGGGTTCGGCGACTGTCCGACAGATCCGAGA
CGAGATCAAGACCTTCATCCTGGCCGGGCACGAGACGTCGGCCTCCATGC
TGACATGGGCCCTGTATGAGGCCACGCAGAGCCAAGGCGTCGCGGACAGG
GTCGCTGCGGAGGCCGCCGTCGTCTTCGGCCCGGATGCCAGCGCCACGAC
CCCGCTCCCTGCGGCCGATAAATTGGGAAGCTTGATCTACACGCAATGCT
GCCTGAAAGAGGCCTTGCGGAAATACAGCGTGGTTCCGATCGTGACGCGC
GAGACAGTACGGGAGGTTTCCCTGGGGTCTGGGAGATATTTGATACCCAA
GGGAACGAGGATGATGATCTTGATCCAGGGCGTGCACCACCGGAAAGATT
TGTGGCCTTCGCCGCTCACCTACCGCCCGGAGCGCTTCCTGAAAAAAGGA
CCCGAGCCTTTCACCTTCTTGCCCTTCATCGACGGCCCTCGAAACTGCTT
GGGACAGCACTTGGCGTTGCTGGAGACCAAGATCGTCCTGGCGACCCTCT
TGCAGCGGTTTCGCTTCGAGGCAATCGGGGGGGAGAGGGCCGGGAGGAAA
CACCCGTCCATGGTTCCCGTGATCCCTGACGACCCCGGGTTGATGGTTGT
GGTGAGATAGATGGCAGGTTCTCTAGCCTATTTTAGGCGTGTTCTCTTCG
ACAGCTCTTCGAGGATCGCCTGTCTCAGTTGGCCTTTGTTTTTCGCTCTG
CCCCGTCCTTGCAGCCGCGTGCTGTCCACCTGGACAATGCCCACCAAGTA
CATAATAGCCGAAATACTGAGGCTCATGCCAGATCTTGAGAGTTTTTCGC
GCCCATCTTCGGCTGAAGCGCCCGAAATTAGCATCGATAGAG back to top
|