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Properties
| Property Name | Value |
|---|
| Product | stomatin prohibitin-family membrane protease subunit |
| Orig transcript id | gnl|cribi|Naga_100006g80.8674.mrna |
| Orig protein id | gnl|cribi|Naga_100006g80.8674 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:1153579..1155296 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1086 ID=rna1086|Name=rna1086|organism=Nannochloropsis gaditana|type=mRNA|length=2142bp
ATGGACGATGAGGACATCCTCCTCGACAGTCGTGCTGTAGGGGGCAAGCG
TGGAGCAGATTTGGGGGCTCCTCTTTTGCTGCCGAGCTCATCAGCAAGTG
GAGGAGACCAAGGGGGTTTTGGTGCAGCGTACGTCCCTGCCACGGTGCGG
CGGCGACGGCTATGGTTCGACAACGTGTTTGGGGTGATCTTTGGTATATT
TGCCTTCGTCATGACTCTTTTGGCCTTGACGATAGGCGTCAAGGCGGTGA
TCAACAGGCGGACGCCGGCTGTGGTTGTATTGGATGAAGGTACCTCAAGC
GTGGACGACCCCGCCCATCCCGGCACTCGGCACGCCACCTACGAGGGCTT
CAAGCTCTTCTCGGGCCTCGCACTGATTTGTACTCTGGGCGTGGTGCTTT
CTGCGTTATGGTTGCAGGTGATGGTGACTTGCTCCTCTGCCCTCTTGACC
TATACCCTCATGGCTGTGGCCCTCCTTGGTCTTTTGGCTGGCACAGCGTT
CTTCGCAGGCGCCAACCCTTGGGCGGGCGTTGTCACCCTTCTTGTGACAG
TGATCGCTCTGGTCTATTTCCAGCAGCTCCGGAGGCGCATGGCCTTTGCA
ACAGCCAATTTGAAAATCGCGTGCAGGGCCCTATGGGATAGCCCCCCCTT
GTTGGGCGTCGGAGTGGGTCTCCTGCTTCTGCAAGTGTGCTGGGGGATAC
TCTGGGCACTGGCTTTGATGGGTGCGGCGACAAATGCGGACCTGGCGACC
CTGCGGGACCCGGTTTCGGGCCAGGTGTACCCCATGAGTCAATGCACGAC
CTATGAGACCCTGGGTCCCAACGGGAATTTTACGGCCGCCTGTCTCCACA
CGGGTCAGACCTGTCTGAAATGCGTGTGTGGGAGCGGGATTAGCGCCGTG
ACCGTCTGGGAGGATCGTTCGTGTTTTGCCTACAAGCTGTACGCGGGCTG
GCTCGTGGTTCTGCTGGCTGGCTTCTTGTGGGGAGGCGCGGTGGTCCGCA
ACGTGGGGCATTGCACCGTGTCCGGGACGGTGGGGACCTGGTGGGTGTCG
GGGAGGGAGCGGGGAGCTGCGTCGGTGGGGAGTCATTTCCGACGGTCCTT
GTCCACCTCGTTTGGATCCATTTGTCTGGGTTCCCTGCTTGTGGCGCTCG
TGCAGACGGCCCGGCATGTTCTCTTGAACGCCCACCGGGCCAACCAACGG
ACGGTGCAGAGCAACACCATCACGGCCATGCTGGGCTGTCTCCTCGTCCT
GGTCGACCGGGCGCTGGCCTGGTTCAACCGATACGCCCTCGTGTATGTGG
CTCTGTACGGGTTGGATTTCATGTCGGCGGGCAAGGCGACGACGGAGCTC
TTTCGTGCCCGCGGGGTCACCGCCCTGGTCAACGACACCATGATCGAAGG
CGTCCTATCCCTTGGCGTGGTGATCGTGGGCTTGCTCTGTGCGTTGACGG
GGTACTTGTACGGGAGGGATTGGGGCATAAGCCAGGCGAACGTGGCGATT
CTGGGAGTGTCCGGCGCTTTTATCGGCGTGGGACTTGCAGGGGTGGTGTC
AGGTTTAGTGGAAAGCGCCGTTTGCACCACCTTTGTCCTTTTCGCGGAAG
ACCCGCAGTCCTTGGAGATCAGCCATGGAGGGGAGGCGTGCGAGGAGCTG
GTGCAGGCCTGGGAGGATGTGTTGCAGGGGCCCTTGTCGGGGATGGGAGG
GATGGTGGGAGGGGCCGAAGGAGGGCGTGGACAGGGAGGCTTCAAGCCAC
CGGTGCCGTCTCCTTCGCCACTTGAGGGCGATCGACCCTCGCCCTCCTCG
CAGGCCCCCTCCTCGTCCGCTGTGGGCCCGGGCATGGTCCCGCCTTACCC
CTCTTCGGCCTCGGTGAATCCTGCGGGAAAAGGGAAACGAGCGAGTCCGC
CCCCGGCGCCCGCGACAGCCGTAGAGAGGGCTGTGGCGAATTTTGGAGGT
GGGTCCTCTTTGTTGTTCGGGAGGGGTGGAGGGAGTGTGAGTCGGACGCC
GACCCTGGATGTGGGGGAGGAGGAGCAAGAGGAAGAAGGGGAGGGCGGGG
GGGAGGGCGGGAGGGAAGGAGGGCGGGAGGGCGAGGGAGAAGGAGGGATG
GAGACAGGGATGCATGGGGAGGAGGACGTGGAGGAGGTGTGA back to topprotein sequence of rna1086 >rna1086-protein ID=rna1086-protein|Name=rna1086|organism=Nannochloropsis gaditana|type=polypeptide|length=447bp
MLSHGGTVTLRSKQFLPLAHAAFSTLRTPACSSVATNVAPRLLRRRVTMP
VTALGENLRLVPRRSLASMPHSSYQFSTMYEDVWPLGSTNTILNVCPQGE
RFVVERFGKLLDIKESGWFLAIPYVDRIAYRIDMRERAMAIAPQPAITKD
NVSVDVSGILYVQFVDPAQAAYGSYNPLYAVRQCAQSAMRAALGELELDE
ILHARSRLNEMIRKSIQDACTAWGMEVKRYEITEIRPDKTITHAMDKQAA
AERHRRELVIKAEGEKRAQELQSEGVKIKLRNESEGDLIKTTNEAEARKQ
QYILEGEGEAKAIRVKAEAFAESIRVVAESLGEAQGQDAAKLQVAKEYIS
MYGLMGSQSHTMLFSDRPGDVNALFAQAALALQAAGQSSVTGKAPSPVSV
VPAPTYTGERVQGGGGGGLGGGRGALEGVRRGNEGGGGLERASLWRF back to topmRNA from alignment at CM002456.1:1153579..1155296- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1086 ID=rna1086|Name=rna1086|organism=Nannochloropsis gaditana|type=mRNA|length=1718bp|location=Sequence derived from alignment at CM002456.1:1153579..1155296- (Nannochloropsis gaditana)
ATGCTCTCTCATGGCGGAACGGTAACTCTGCGCAGTAAGCAGTTCTTGCC
GTTAGCCCATGCTGCATTTTCAACATTGCGCACTCCTGCTTGCTCCTCCG
TCGCGACCAATGTAGCTCCACGTTTGCTTCGACGACGAGTCACCATGCCT
GTAACCGCACTGGGTGAGAATTTACGCCTTGTGCCGCGACGTTCTTTGGC
ATCCATGCCCCACTCAAGCTACCAATTTTCCACAAGTAAGTCCATCCATC
TCTATCTATCATTTCACTGCCTATAATGTAGCGTTTTTTGACTCAATCCA
TGTATGTCACGTCCAGTGTACGAGGACGTGTGGCCCCTGGGTAGCACGAA
CACCATCCTCAACGTCTGCCCACAGGGCGAGCGCTTCGTAGTGGAACGCT
TTGGAAAACTTCTGGATATCAAGGAGTCGGGGTGGTTTCTAGGTAAGTTG
TCCCTCGGCCGGGTAGACCTATGTTTTTCCCTTTCTCACATTGATGTTGT
CTCCCGGCTCGTAATGACGTGCCTGCTCTACGCCCCCATCTTCCTCTCTT
ATTACCCTGTCCCCCGCGCCAGCCATCCCCTACGTGGACCGCATCGCCTA
CCGCATCGATATGCGCGAGCGAGCCATGGCCATCGCCCCGCAACCGGCCA
TCACCAAGGACAACGTCTCGGTGGACGTGAGTGGCATCCTCTACGTGCAA
TTTGTGGACCCAGCCCAGGCCGCCTACGGCTCTTACAATCCCTTGTACGC
CGTGCGTCAATGCGCGCAGTCGGCGATGCGGGCGGCCCTCGGTGAGCTGG
AGCTGGACGAGATTTTGCACGCCCGGAGTCGGTTGAACGAAATGATCCGA
AAGAGCATTCAAGACGCGTGTACGGCCTGGGGTATGGAGGTGAAGCGGTA
CGAGATCACGGAGATCCGCCCGGACAAGACGATCACGCATGCCATGGACA
AGCAGGCGGCGGCGGAGCGGCACCGGCGGGAGTTGGTCATCAAGGCGGAG
GGGGAGAAGCGGGCACAAGAGTTGCAGTCGGAGGGGGTGAAGATCAAACT
CAGGAACGAATCCGAGGGCGACCTGATCAAGACCACCAACGAGGCTGAGG
CCCGCAAGCAGCAGTACATCCTGGAAGGGGAGGGAGAAGCCAAGGCGATC
CGTGTGAAGGCGGAGGCCTTCGCCGAGTCCATCCGGGTGGTGGCGGAGAG
CCTGGGCGAGGCGCAAGGTCAGGACGCCGCCAAGCTGCAGGTGGCCAAGG
AGTATATCAGCATGTACGGTCTGATGGGTTCCCAGTCCCACACCATGCTT
TTCTCGGACCGGCCTGGGGACGTGAACGCCCTCTTCGCCCAGGCGGCATT
GGCTCTGCAGGCAGCAGGGCAGAGCAGCGTGACCGGAAAGGCGCCCAGTC
CCGTGAGCGTGGTGCCGGCGCCTACCTACACGGGAGAGAGGGTTCAAGGA
GGGGGCGGGGGAGGGCTTGGGGGAGGAAGGGGGGCATTGGAAGGAGTGAG
GCGAGGCAATGAAGGGGGGGGGGGGCTGGAGAGAGCTAGGTCGGAGGTAG
AGGCCTGGCGTGGCCCGCGGGGTGGAATGAGAGCATGGTGCTCTACCGCG
CCTACGGCACGTTGGGGGCGAAAAAGAAGAGAAAAGACCCGTCAAGTGCC
CGTAGCGGGGTTGCAAGTTATACAGCCTCAATGTACGATAAGCGACGCCC
AGCTTGTGGAGATTCTGA back to topCoding sequence (CDS) from alignment at CM002456.1:1153579..1155296- >rna1086 ID=rna1086|Name=rna1086|organism=Nannochloropsis gaditana|type=CDS|length=5376bp|location=Sequence derived from alignment at CM002456.1:1153579..1155296- (Nannochloropsis gaditana)
CTTGTGGAGATTCTGACCATCCCCTACGTGGACCGCATCGCCTACCGCAT
CGATATGCGCGAGCGAGCCATGGCCATCGCCCCGCAACCGGCCATCACCA
AGGACAACGTCTCGGTGGACGTGAGTGGCATCCTCTACGTGCAATTTGTG
GACCCAGCCCAGGCCGCCTACGGCTCTTACAATCCCTTGTACGCCGTGCG
TCAATGCGCGCAGTCGGCGATGCGGGCGGCCCTCGGTGAGCTGGAGCTGG
ACGAGATTTTGCACGCCCGGAGTCGGTTGAACGAAATGATCCGAAAGAGC
ATTCAAGACGCGTGTACGGCCTGGGGTATGGAGGTGAAGCGGTACGAGAT
CACGGAGATCCGCCCGGACAAGACGATCACGCATGCCATGGACAAGCAGG
CGGCGGCGGAGCGGCACCGGCGGGAGTTGGTCATCAAGGCGGAGGGGGAG
AAGCGGGCACAAGAGTTGCAGTCGGAGGGGGTGAAGATCAAACTCAGGAA
CGAATCCGAGGGCGACCTGATCAAGACCACCAACGAGGCTGAGGCCCGCA
AGCAGCAGTACATCCTGGAAGGGGAGGGAGAAGCCAAGGCGATCCGTGTG
AAGGCGGAGGCCTTCGCCGAGTCCATCCGGGTGGTGGCGGAGAGCCTGGG
CGAGGCGCAAGGTCAGGACGCCGCCAAGCTGCAGGTGGCCAAGGAGTATA
TCAGCATGTACGGTCTGATGGGTTCCCAGTCCCACACCATGCTTTTCTCG
GACCGGCCTGGGGACGTGAACGCCCTCTTCGCCCAGGCGGCATTGGCTCT
GCAGGCAGCAGGGCAGAGCAGCGTGACCGGAAAGGCGCCCAGTCCCGTGA
GCGTGGTGCCGGCGCCTACCTACACGGGAGAGAGGGTTCAAGGAGGGGGC
GGGGGAGGGCTTGGGGGAGGAAGGGGGGCATTGGAAGGAGTGAGGCGAGG
CAATGAAGGGGGGGGGGGGCTGGAGAGAGCTAGTGTACGAGGACGTGTGG
CCCCTGGGTAGCACGAACACCATCCTCAACGTCTGCCCACAGGGCGAGCG
CTTCGTAGTGGAACGCTTTGGAAAACTTCTGGATATCAAGGAGTCGGGGT
GGTTTCTAGATGCTCTCTCATGGCGGAACGGTAACTCTGCGCAGTAAGCA
GTTCTTGCCGTTAGCCCATGCTGCATTTTCAACATTGCGCACTCCTGCTT
GCTCCTCCGTCGCGACCAATGTAGCTCCACGTTTGCTTCGACGACGAGTC
ACCATGCCTGTAACCGCACTGGGTGAGAATTTACGCCTTGTGCCGCGACG
TTCTTTGGCATCCATGCCCCACTCAAGCTACCAATTTTCCACAACTTGTG
GAGATTCTGACCATCCCCTACGTGGACCGCATCGCCTACCGCATCGATAT
GCGCGAGCGAGCCATGGCCATCGCCCCGCAACCGGCCATCACCAAGGACA
ACGTCTCGGTGGACGTGAGTGGCATCCTCTACGTGCAATTTGTGGACCCA
GCCCAGGCCGCCTACGGCTCTTACAATCCCTTGTACGCCGTGCGTCAATG
CGCGCAGTCGGCGATGCGGGCGGCCCTCGGTGAGCTGGAGCTGGACGAGA
TTTTGCACGCCCGGAGTCGGTTGAACGAAATGATCCGAAAGAGCATTCAA
GACGCGTGTACGGCCTGGGGTATGGAGGTGAAGCGGTACGAGATCACGGA
GATCCGCCCGGACAAGACGATCACGCATGCCATGGACAAGCAGGCGGCGG
CGGAGCGGCACCGGCGGGAGTTGGTCATCAAGGCGGAGGGGGAGAAGCGG
GCACAAGAGTTGCAGTCGGAGGGGGTGAAGATCAAACTCAGGAACGAATC
CGAGGGCGACCTGATCAAGACCACCAACGAGGCTGAGGCCCGCAAGCAGC
AGTACATCCTGGAAGGGGAGGGAGAAGCCAAGGCGATCCGTGTGAAGGCG
GAGGCCTTCGCCGAGTCCATCCGGGTGGTGGCGGAGAGCCTGGGCGAGGC
GCAAGGTCAGGACGCCGCCAAGCTGCAGGTGGCCAAGGAGTATATCAGCA
TGTACGGTCTGATGGGTTCCCAGTCCCACACCATGCTTTTCTCGGACCGG
CCTGGGGACGTGAACGCCCTCTTCGCCCAGGCGGCATTGGCTCTGCAGGC
AGCAGGGCAGAGCAGCGTGACCGGAAAGGCGCCCAGTCCCGTGAGCGTGG
TGCCGGCGCCTACCTACACGGGAGAGAGGGTTCAAGGAGGGGGCGGGGGA
GGGCTTGGGGGAGGAAGGGGGGCATTGGAAGGAGTGAGGCGAGGCAATGA
AGGGGGGGGGGGGCTGGAGAGAGCTAGTGTACGAGGACGTGTGGCCCCTG
GGTAGCACGAACACCATCCTCAACGTCTGCCCACAGGGCGAGCGCTTCGT
AGTGGAACGCTTTGGAAAACTTCTGGATATCAAGGAGTCGGGGTGGTTTC
TAGATGCTCTCTCATGGCGGAACGGTAACTCTGCGCAGTAAGCAGTTCTT
GCCGTTAGCCCATGCTGCATTTTCAACATTGCGCACTCCTGCTTGCTCCT
CCGTCGCGACCAATGTAGCTCCACGTTTGCTTCGACGACGAGTCACCATG
CCTGTAACCGCACTGGGTGAGAATTTACGCCTTGTGCCGCGACGTTCTTT
GGCATCCATGCCCCACTCAAGCTACCAATTTTCCACAACTTGTGGAGATT
CTGACCATCCCCTACGTGGACCGCATCGCCTACCGCATCGATATGCGCGA
GCGAGCCATGGCCATCGCCCCGCAACCGGCCATCACCAAGGACAACGTCT
CGGTGGACGTGAGTGGCATCCTCTACGTGCAATTTGTGGACCCAGCCCAG
GCCGCCTACGGCTCTTACAATCCCTTGTACGCCGTGCGTCAATGCGCGCA
GTCGGCGATGCGGGCGGCCCTCGGTGAGCTGGAGCTGGACGAGATTTTGC
ACGCCCGGAGTCGGTTGAACGAAATGATCCGAAAGAGCATTCAAGACGCG
TGTACGGCCTGGGGTATGGAGGTGAAGCGGTACGAGATCACGGAGATCCG
CCCGGACAAGACGATCACGCATGCCATGGACAAGCAGGCGGCGGCGGAGC
GGCACCGGCGGGAGTTGGTCATCAAGGCGGAGGGGGAGAAGCGGGCACAA
GAGTTGCAGTCGGAGGGGGTGAAGATCAAACTCAGGAACGAATCCGAGGG
CGACCTGATCAAGACCACCAACGAGGCTGAGGCCCGCAAGCAGCAGTACA
TCCTGGAAGGGGAGGGAGAAGCCAAGGCGATCCGTGTGAAGGCGGAGGCC
TTCGCCGAGTCCATCCGGGTGGTGGCGGAGAGCCTGGGCGAGGCGCAAGG
TCAGGACGCCGCCAAGCTGCAGGTGGCCAAGGAGTATATCAGCATGTACG
GTCTGATGGGTTCCCAGTCCCACACCATGCTTTTCTCGGACCGGCCTGGG
GACGTGAACGCCCTCTTCGCCCAGGCGGCATTGGCTCTGCAGGCAGCAGG
GCAGAGCAGCGTGACCGGAAAGGCGCCCAGTCCCGTGAGCGTGGTGCCGG
CGCCTACCTACACGGGAGAGAGGGTTCAAGGAGGGGGCGGGGGAGGGCTT
GGGGGAGGAAGGGGGGCATTGGAAGGAGTGAGGCGAGGCAATGAAGGGGG
GGGGGGGCTGGAGAGAGCTAGTGTACGAGGACGTGTGGCCCCTGGGTAGC
ACGAACACCATCCTCAACGTCTGCCCACAGGGCGAGCGCTTCGTAGTGGA
ACGCTTTGGAAAACTTCTGGATATCAAGGAGTCGGGGTGGTTTCTAGATG
CTCTCTCATGGCGGAACGGTAACTCTGCGCAGTAAGCAGTTCTTGCCGTT
AGCCCATGCTGCATTTTCAACATTGCGCACTCCTGCTTGCTCCTCCGTCG
CGACCAATGTAGCTCCACGTTTGCTTCGACGACGAGTCACCATGCCTGTA
ACCGCACTGGGTGAGAATTTACGCCTTGTGCCGCGACGTTCTTTGGCATC
CATGCCCCACTCAAGCTACCAATTTTCCACAACTTGTGGAGATTCTGACC
ATCCCCTACGTGGACCGCATCGCCTACCGCATCGATATGCGCGAGCGAGC
CATGGCCATCGCCCCGCAACCGGCCATCACCAAGGACAACGTCTCGGTGG
ACGTGAGTGGCATCCTCTACGTGCAATTTGTGGACCCAGCCCAGGCCGCC
TACGGCTCTTACAATCCCTTGTACGCCGTGCGTCAATGCGCGCAGTCGGC
GATGCGGGCGGCCCTCGGTGAGCTGGAGCTGGACGAGATTTTGCACGCCC
GGAGTCGGTTGAACGAAATGATCCGAAAGAGCATTCAAGACGCGTGTACG
GCCTGGGGTATGGAGGTGAAGCGGTACGAGATCACGGAGATCCGCCCGGA
CAAGACGATCACGCATGCCATGGACAAGCAGGCGGCGGCGGAGCGGCACC
GGCGGGAGTTGGTCATCAAGGCGGAGGGGGAGAAGCGGGCACAAGAGTTG
CAGTCGGAGGGGGTGAAGATCAAACTCAGGAACGAATCCGAGGGCGACCT
GATCAAGACCACCAACGAGGCTGAGGCCCGCAAGCAGCAGTACATCCTGG
AAGGGGAGGGAGAAGCCAAGGCGATCCGTGTGAAGGCGGAGGCCTTCGCC
GAGTCCATCCGGGTGGTGGCGGAGAGCCTGGGCGAGGCGCAAGGTCAGGA
CGCCGCCAAGCTGCAGGTGGCCAAGGAGTATATCAGCATGTACGGTCTGA
TGGGTTCCCAGTCCCACACCATGCTTTTCTCGGACCGGCCTGGGGACGTG
AACGCCCTCTTCGCCCAGGCGGCATTGGCTCTGCAGGCAGCAGGGCAGAG
CAGCGTGACCGGAAAGGCGCCCAGTCCCGTGAGCGTGGTGCCGGCGCCTA
CCTACACGGGAGAGAGGGTTCAAGGAGGGGGCGGGGGAGGGCTTGGGGGA
GGAAGGGGGGCATTGGAAGGAGTGAGGCGAGGCAATGAAGGGGGGGGGGG
GCTGGAGAGAGCTAGTGTACGAGGACGTGTGGCCCCTGGGTAGCACGAAC
ACCATCCTCAACGTCTGCCCACAGGGCGAGCGCTTCGTAGTGGAACGCTT
TGGAAAACTTCTGGATATCAAGGAGTCGGGGTGGTTTCTAGATGCTCTCT
CATGGCGGAACGGTAACTCTGCGCAGTAAGCAGTTCTTGCCGTTAGCCCA
TGCTGCATTTTCAACATTGCGCACTCCTGCTTGCTCCTCCGTCGCGACCA
ATGTAGCTCCACGTTTGCTTCGACGACGAGTCACCATGCCTGTAACCGCA
CTGGGTGAGAATTTACGCCTTGTGCCGCGACGTTCTTTGGCATCCATGCC
CCACTCAAGCTACCAATTTTCCACAA back to top
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