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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100006g88.8701.mrna |
| Orig protein id | gnl|cribi|Naga_100006g88.8701 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:1140246..1140488 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1078 ID=rna1078|Name=rna1078|organism=Nannochloropsis gaditana|type=mRNA|length=3557bp
CATGTTCCGTGGGCACCACAATTGTTCTATTTTCGACGTCAGTCTCTGAG
TGGTGGTGGCATTTTTTCACTGTCTACGCTTGTACTGGTGCGTACATTTG
GTATTTCATCTGAGAGCATAAATTACTCAATCTGTATGCATCGGGGAAGG
ATTTCAACTCTGCGTGCATCACTTTTTTTGCTCGAACAAAGCGCAGGAAG
CAACGAAGGCTGCTTCTTTCTTTTTCCTCTTGCGATATTTCTTGCAAGGA
GTCTGTAAGACAGCGACTTGCTTGCGAGAGCAACGTTGTAGGTAACATAT
ACTCTCTCGTGTTGTACTGTTTATTGACGTGCGGTCAGTTCTGTAGGGTT
TTTGGTGCAGACAAGGATTTTCTCATGCCGTTGTGTGAGTGTGTGGGTGG
GGCAGGGTGCACTGTTTTTGACACCAAATAAAAACAACCCTTGACACGAG
GAGGCCAGTAATATTTTCCCGTGTCGATGAAGATATGTCTGCCCAGGCCT
TCGTCGTAATGTTGGAGGTAGTCATTGGATGTGAAATGATGGGCGGGTTA
AATACGAAAACATCTTCGCCCCTATGGAAGGGGAAGGGTGGGGGGCAAAT
GAACTCCCGTCCTATTCCCATGCCCGGCCTTCATCGAGATTCTTACTCTG
TTTCCTCTATGTATACAGAACAGCCTACACAGATTCTTTCGGAGTAAGCT
AAGAGAAGCAACCATGTCTGGCGATGCCGAAACATTTGCCTTCTCGGCGG
ATATCAATCAATTGCTATCCCTGATTATCAACACCTTCTACTCCAACAAG
GAAATTTTCCTTCGCGAACTCATCAGCAATTCTTCGGATGCCTTGGACAA
GATTCGTTACATGTCTCTGACGGACAAATCCGTGCTGGACTCGGAGCCTG
AATTAGAGATCCGCCTGATTCCCGACAAGGCGAATGGGACCCTGACCATT
GAGGACACGGGGATCGGGATGACCAAAGCCGACCTGATCAACAATCTGGG
GACCATCGCCAAGTCCGGCACGAAGGCCTTCATGGAGGCCCTGCAGGCAG
GCGCCGATATCAGCATGATCGGGCAGTTCGGCGTGGGTTTCTACTCGTCG
TATCTGGTTGCGGACAAGGTGGTGGTGACGAGCAAGAACAACGACGACGA
GCAATACACCTGGGTGTCCGAGGCTGGAGGTTCCTTCACTGTCACCCCCG
ACACCTCCGGGAAGCCGTTGGGGAGGGGAACCCGCATTGTCCTGCACCTG
AAGGAGGACATGAAGGAATACCTGGAGGAACGCCGCATCAAGGACCTGGT
CAAGAAGCACAGCGAATTCATCGGTTTCCCCATCAAGCTGTACGTGGAGA
AGACTACGGAGAAGGAGGTGACGGACGACGAGGCAGAGGAGGAGGAGGAG
GAGAAGGAAGGGGAGGAGAAGCCCAAGGTGGAGGAGATGGATATGGAGGA
CGAGAAGGAGAAGAAAGAGAAGAAGACGAAGAAGATCAAGGAAGTGACGC
ACGAGTGGGTCCACTTGAACCAGCAGAAACCGATCTGGATGCGGAACCCG
GAGGAGATCACGCAGGAGGAGTACGCGGCTTTCTACAAGTCCTTGACCAA
TGACTGGGAGGAGCACGCGGCGGTGAAACACTTCTCGGTGGAAGGGCAGC
TCGAGTTCAAGGCGGTCCTTTTCGTTCCCAAGCGTGCGCCCTTCGACATG
TTCGAGGGAGGGTCCAAGCGCAAATGCAACAACATCAAGTTGTACGTCCG
GCGGGTCTTCATCATGGACAACTGCGAGGAATTGATGCCGGAATACCTCC
AATTTGTCAAGGGCGTGGTCGACTCGGAGGATCTGCCTCTCAACATTTCC
CGCGAGACGCTCCAGCAAAACAAGATTTTGAAGGTGATCCGCAAGAACCT
GGTGAAGAAGTCGATCGAACTCTTCAACGAGCTGGCGGAAGACACGGAGA
AGTACAAGAAATTCTACGAAGCCTTCGCCAAGAACATCAAACTGGGCGTG
CACGAGGACTCCACGAACAGGGCCAAGCTGGCCAAGCTTTTGCGGTACTA
CTCGACCAAGTCGGGGGAGGAAATGACGGGCTTTGACGACTATCTGGCGC
GCATGCCTGAGAAGCAGCCGGGGATCTACTATGTGACAGGCGAGAGCAAG
CGCGCGGTCGAGAACTCCCCTTTCCTGGAGAGGCTGAAGAAGAAGGGGTA
CGAGGTCCTGTTCATGATCGACCCCATCGACGAGTACGCGGTGCAGCAGC
TCAAGGAGTACGAAGGGAAGAAACTGATTTGCGTGACCAAGGAAGGGCTC
AAGATCGACGAGGACGACGAGGAGGAGGCCAAGGCCTTCGAGGAGCTCAA
GGCGAAGACGGAGGGTCTGTGCAAGCTCATGAAGGAGGTCCTGGACGAGA
AGGTTGATAAGGTTGTGGTGTCGCCCCGACTGGCGGACTCCCCCTGCGTC
CTAGTCACGGGGGAGTACGGATGGTCGGCCAACATGGAGCGGATCATGAA
GGCACAGGCCTTGCGTGACTCCTCCACCTCGGCGTACATGACGAGCAAGA
AGACGATGGAGATCAATCCTAAACATCCCATCGTCAAGGCCTTGCGCGAA
AAGGCGGAGGCGAACCAAACAGACAAGACCCTCAAGGACTTGACCTGGCT
GCTGTACGACACGTCGCTCTTGACCTCGGGCTTCTCGTTGGACGACCCCA
ACACGTTCGCCTCCCGCATCCATCGGCTGATCAAGCTGGGCTTGTCCATT
GACGAGGACGTGGAGGAGGAGGAGGGTGCCGGAGGCAAGGACGACGAGTT
GCCCCCCCTGGAAGAGGGAGGTGAGGGAGAGAGCGCGATGGAGACGGTAG
ATTAAGGACGTGATGTGTGAGGAGAGGAAATAGGAAGCCTGAAGGTTGGT
GGCTGGGTGAGCGAAGACGGGCAGTCGGGGGGAAATATGTGTTACTTGTC
AAATTCTGGAGTCTTAGATCTGAGGACCCTTTGAGAGCAATTGGGTTTTA
CAGATTAGACGAAAGAGGTTCGAGGTGAATAACTCGTTTTCACGTGGCTG
TCGGGGGAAGGGCGAGAGCTGGGAACAGGGAGAAACGAGGCAGGTGCCGC
AGCATGTTTCATAACTAACGGCGTATCAGAACCAGTCACAGAATCTCGCA
AAGAGAAGTGCGTAGGTTGATCTTTTTTCCTCGATCGTGCCGTGTCAAGA
AGGAGTATCCAGATGCCGAACGCCTGAGGGCGATCTTAGAGGAAGGAACA
GAGGCCGAAAGGAAAGATGGTAGTATGTAGGATGTGTTATGAATTCTCCC
CTCTGCTGCAAGAGCCCACGACCTTATGAGAAAAGAAACCCGAAAAACGA
GGAAAACAACTCATGCTACGTAGACGGTGGAAGTGCTCTTTTTTTATCTT
GATTTTTCGGGTTTGATTTGTATTTTTCGGGTTCGATCTGTTTCGACACT
GCCATGCGGCCACCCTGTCCCTGGATAGGAGTGATGGGCAGAGAGAAAAG
ACAACTTCCACTGCCAGTTCACAGAAAAGAATGTGTAGACGCACAATAAC
CGTTGGG back to topprotein sequence of rna1078 >rna1078-protein ID=rna1078-protein|Name=rna1078|organism=Nannochloropsis gaditana|type=polypeptide|length=80bp
MEGLAGESTLGMKVLRAAHDCDVELLPQRLLCVYTFFSVNWQWKLSFLSA
HHSYPGTGWPHGSVETDRTRKIQIKPEKSR back to topmRNA from alignment at CM002456.1:1140246..1140488- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1078 ID=rna1078|Name=rna1078|organism=Nannochloropsis gaditana|type=mRNA|length=243bp|location=Sequence derived from alignment at CM002456.1:1140246..1140488- (Nannochloropsis gaditana)
ATGGAGGGATTGGCGGGTGAGAGCACGCTAGGTATGAAGGTACTGCGAGC
AGCGCATGATTGTGATGTTGAGCTTCTCCCCCAACGGTTATTGTGCGTCT
ACACATTCTTTTCTGTGAACTGGCAGTGGAAGTTGTCTTTTCTCTCTGCC
CATCACTCCTATCCAGGGACAGGGTGGCCGCATGGCAGTGTCGAAACAGA
TCGAACCCGAAAAATACAAATCAAACCCGAAAAATCAAGATAA back to topCoding sequence (CDS) from alignment at CM002456.1:1140246..1140488- >rna1078 ID=rna1078|Name=rna1078|organism=Nannochloropsis gaditana|type=CDS|length=243bp|location=Sequence derived from alignment at CM002456.1:1140246..1140488- (Nannochloropsis gaditana)
ATGGAGGGATTGGCGGGTGAGAGCACGCTAGGTATGAAGGTACTGCGAGC
AGCGCATGATTGTGATGTTGAGCTTCTCCCCCAACGGTTATTGTGCGTCT
ACACATTCTTTTCTGTGAACTGGCAGTGGAAGTTGTCTTTTCTCTCTGCC
CATCACTCCTATCCAGGGACAGGGTGGCCGCATGGCAGTGTCGAAACAGA
TCGAACCCGAAAAATACAAATCAAACCCGAAAAATCAAGATAA back to top
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