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Properties
| Property Name | Value |
|---|
| Product | flavin oxidoreductase nadh oxidase |
| Orig transcript id | gnl|cribi|Naga_100033g30.8387.mrna |
| Orig protein id | gnl|cribi|Naga_100033g30.8387 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:286308..288958 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna106 ID=rna106|Name=rna106|organism=Nannochloropsis gaditana|type=mRNA|length=549bp
CCCGTTCTCGGTTCGAGATAGTGCCCCGTGATTGTCACCGGAAATGTCAC
AATAAGACCCGTGTTGACACGTTACACACCCACCTTGCACGACTCTACAG
CATTCTCATGCCTGTCGGCGGAGCGCTGAAGCTGAAAGGGCTTCCTACAA
AAGACAAGAAGAAGAAGAAGCGTCAGCGCGACGAGCGCTCGCACCACGAG
GGAGACGCCGTCCTTACCCATGAGAAGCAAGAGGAAAGGGGGGGAAATGA
AAGCATTTCAGATACCTCGTCTTTCCCCTCTGAAAAGGACGATGGTTTGA
CGGAAACCCAACGACGTCACATTGCCAAGTTGAAGGAACGTGAGCGGCAG
AATATCAAGAAACTGGTAAGTAAGAGCCACCGAGAGCGCATCGATGAGTT
CAATCAGTACTTGTCGGTGCTCACGGAGCACAATGATATTCCGCGAGTGT
CCGCGGCAGGAAATGGATAAGCTTGTGGTGGGTTTGCCCTCACATTAACA
TGGAACAAACGAGCTTAAAGAAAGAAATACGTGCGACACCTTTTCCTTT back to topprotein sequence of rna106 >rna106-protein ID=rna106-protein|Name=rna106|organism=Nannochloropsis gaditana|type=polypeptide|length=419bp
MELGKLFSPYTMGHFQLPHRIVMAPLTRMRSGPCQVPTLLNAEYYAQRAS
AALIIGEATYVAPEGYGYCNSPGIVSDEQVEGHKLLTQAVHDKGGLFFLQ
LWHVGRISHPSMQPQGQLPVAPSGIAPKDVNAATHMGRLPIPTPRSLTTS
EIQSMVVEPFRKAACNARRAHYDGVEIHAANGYLLEQFLSDGTNHRTDQY
GGNIENRFRVLREVCTAVIDAWDGDGRRVGVRLSPSGTFNDMADSDWMSH
WTYIVRELDKLGLAYLHVVEPRIDGSADRYTDRETKISTTWRKTWRNIWS
GTLIGAGGYTRRTAEAALRNKDLDLVCFGRKFISNPDLPARFAAAARSDA
GQREASREQGRRGSNDKGFHTEEGEIGGEEREEDDDDVSFLNPYERETFY
GGGAQGYTDYPFWKKGETS back to topmRNA from alignment at CM002455.1:286308..288958+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna106 ID=rna106|Name=rna106|organism=Nannochloropsis gaditana|type=mRNA|length=2651bp|location=Sequence derived from alignment at CM002455.1:286308..288958+ (Nannochloropsis gaditana)
TTGTCCTTTGCGAGTATCTGAGTGCACATCTATCCCATGCAGAGAGGTCG
AAATAGACCATTGTCCAAGCCCGCCGTGGCCCCCTGAAAGCACATGGAGC
TTGGAAAGTTGTTCAGTCCTTACACAATGGGGCATTTTCAACTGCCTCAT
CGTATTGTGATGGCACCCCTGACAAGGATGAGGTCTGGACCGTGCCAAGT
CCCGACTCTTCTCAATGCCGAGTATTACGCCCAGCGTGCGTCAGCAGCCC
TTATTATTGGCGAGGCCACATACGTCGCACCAGAGGGGTATGGTTACTGC
AATAGTCCGGGTATCGTGAGCGACGAGCAGGTTGAAGGTCACAAGCTCTT
GACCCAGGCAGTTCACGACAAAGGCGgtctcttttttcttcaactGTGGC
ACGTGGGGCGGATATCACACCCCTCTATGCAGCCACAAGGACAACTTCCT
GTCGCTCCCAGCGGCATTGCGCCCAAGGATGTGAATGCTGCCACACATAT
GGGGCGACTACCCATTCCTACTCCTCGATCCCTAACGACATCGGAAATCC
AGTCAATGGTCGTAGAACCTTTCAGAAAAGCAGCATGCAATGCCCGAAGG
GCTCATTACGACGGTAAGCACTCCCGCACAGATGTGTAGGTAAGCGGTGG
GGGCCTCATgaatggaaggagagcaTTTTTTTCTAAATTCCACACTTGTT
GGAAACTTTAAGTGCTCCGCAGCTGTATCCTACAGCTCCACTCACGCCTT
GCCTGTCCACGCATGAAATTTAGGTGTTGAGATTCACGCTGCCAACGGTT
ACCTTCTAGAGCAATTTTTGAGTGACGGCACCAACCACCGTACGGATCAG
TATGGTGGTAATATCGAGAATCGCTTTCGTGTCTTGCGCGAAGTATGCAC
AGCCGTCATTGACGCTTGGGACGGCGACGGTCGGAGGGTCGGAGTACGTT
TATCCCCGTCTGGGACGTTCAATGATATGGCGGACTCGGACTGGATGAGT
CACTGGACTTATATCGTCCGAGAATTGGATAAATTAGGCTTGGCCTACCT
GCATGTCGTCGAGCCACGCATCGACGGGAGTGCGGATCGTTACACGGACA
GGGAGACAAAAATCTCTACTACGTGGCGGAAGACGTGGAGAAACATCTGG
TCAGGCACCTTGATTGGAGCGGGTGGGTACACGCGACGAACGGCCGAGGC
CGCACTTCGAAATAAGGACCTTGACCTTGTGTGCTTTGGACGCAAGTTCA
TCTCCAATCCAGATTTGCCTGCGCGTTTCGCGGCGGCCGCCAGGTCGGAT
GCcggacagagggaggccagCCGGGAGCAAGGTAGACGGGGGAGCAATGA
TAAAGGCTTTCacacagaggagggagaaatcggaggagaggaacgggaag
aagacgacgacgatgTCTCCTTCTTGAATCCTTATGAAAGAGAGACGTTT
TACGGGGGCGGTGCGCAGGGCTACACAGACTACCCTTTTTGGAAAAAGGG
CGAGACAAGCTAATGAAGGAACAGCATTTCGAGCCATGCCTTGACAATAC
TGTCAAAGGTATAATTTCTGAGGACTATGATTCTTCTGTGTCAGTCCCCC
GGAGAGGCGTCGCGCAATGGGTATTACTCCACACCTGAGTGGTGTCGGCA
CGCACAAAACCCAATGTGCGATGGACGCAGGGGAGCACACCACCGACAAA
CTGTACAATGCCTTGACaactggaaaaaaaaagattgCTGACCTGCCATA
TATAGATATACACATACGTGACGTTGACGCGCCACATGTTCCTATTCACA
CAGCGAGCACACCACAGCTTCCCACCGGGGACTGCcgttcctccactgcc
ccgTTTCCTGCGTTTCAACTGATCGCGAAAGTCACCTATGCACGATCAAG
TCGTGGTACGTCTCATGACTTGCTGCCCACGGTAGCGCGGATCAGATACG
TTCGCATGacgtcctttttctccgcaCGAGGCGCCACCGGGAGGGCCCAA
AGACCGTAATGAGCCCCGTTCTCTCCCACggtcaccacctccacctcttc
aAACCCCAAGGTGGACAGGGTAGTCTCGGGCTCCTCCATAGCCGAGGAAA
AAGTGCTGGTCAGCCACTTGTCGCCGGCTTgcgcgcggagggaggcaaga
gtAAAGTCATTGACATgatcggcgaggaggaggctcccCGGGGAGGACAG
CGCTCGAATTACGCCCAACATGGTCTGGACTCGAGGTTCTGGGAAGTAGT
AAAGAAAGCCCTCAAGGATCCACACCGTCTTCTTCTCGGGGTCGAATCCG
GCCTCCTTGAGCTGGCGCACCCAGTGCACGTCGTCGGCAAAGTCGCTAAT
GAGACGATGCACGCTCCGAGCCAGCAACGGGAAACGATCCGCCACCCCGG
CCAGAACCGATGTCTTGTAGTCGAGGACTGGTTTTACGTCCAGCTCGTAA
ATTTGGCACTTCTTCATTTGTTCCAGCCGGTAGCTATTGAATAGAAGTTG
GAAAAGGGTCATGCCAGGTGGTATATGGTTAGGGTTCGTCTGCCAGAAGT
ACAACCTGCAACGACCAAAAATTTGAGGAATTCAGCTCATTATGAGCAGC
ACAGATAAATATTCCTACCAATCTCTTAGCGACTTAAACCGACGCTGTCG
C back to topCoding sequence (CDS) from alignment at CM002455.1:286308..288958+ >rna106 ID=rna106|Name=rna106|organism=Nannochloropsis gaditana|type=CDS|length=2520bp|location=Sequence derived from alignment at CM002455.1:286308..288958+ (Nannochloropsis gaditana)
ATGGAGCTTGGAAAGTTGTTCAGTCCTTACACAATGGGGCATTTTCAACT
GCCTCATCGTATTGTGATGGCACCCCTGACAAGGATGAGGTCTGGACCGT
GCCAAGTCCCGACTCTTCTCAATGCCGAGTATTACGCCCAGCGTGCGTCA
GCAGCCCTTATTATTGGCGAGGCCACATACGTCGCACCAGAGGGGTATGG
TTACTGCAATAGTCCGGGTATCGTGAGCGACGAGCAGGTTGAAGGTCACA
AGCTCTTGACCCAGGCAGTTCACGACAAAGGCGgtctcttttttcttcaa
ctGTGGCACGTGGGGCGGATATCACACCCCTCTATGCAGCCACAAGGACA
ACTTCCTGTCGCTCCCAGCGGCATTGCGCCCAAGGATGTGAATGCTGCCA
CACATATGGGGCGACTACCCATTCCTACTCCTCGATCCCTAACGACATCG
GAAATCCAGTCAATGGTCGTAGAACCTTTCAGAAAAGCAGCATGCAATGC
CCGAAGGGCTCATTACGACGGTGTTGAGATTCACGCTGCCAACGGTTACC
TTCTAGAGCAATTTTTGAGTGACGGCACCAACCACCGTACGGATCAGTAT
GGTGGTAATATCGAGAATCGCTTTCGTGTCTTGCGCGAAGTATGCACAGC
CGTCATTGACGCTTGGGACGGCGACGGTCGGAGGGTCGGAGTACGTTTAT
CCCCGTCTGGGACGTTCAATGATATGGCGGACTCGGACTGGATGAGTCAC
TGGACTTATATCGTCCGAGAATTGGATAAATTAGGCTTGGCCTACCTGCA
TGTCGTCGAGCCACGCATCGACGGGAGTGCGGATCGTTACACGGACAGGG
AGACAAAAATCTCTACTACGTGGCGGAAGACGTGGAGAAACATCTGGTCA
GGCACCTTGATTGGAGCGGGTGGGTACACGCGACGAACGGCCGAGGCCGC
ACTTCGAAATAAGGACCTTGACCTTGTGTGCTTTGGACGCAAGTTCATCT
CCAATCCAGATTTGCCTGCGCGTTTCGCGGCGGCCGCCAGGTCGGATGCc
ggacagagggaggccagCCGGGAGCAAGGTAGACGGGGGAGCAATGATAA
AGGCTTTCacacagaggagggagaaatcggaggagaggaacgggaagaag
acgacgacgatgTCTCCTTCTTGAATCCTTATGAAAGAGAGACGTTTTAC
GGGGGCGGTGCGCAGGGCTACACAGACTACCCTTTTTGGAAAAAGGGCGA
GACAAGCTAAATGGAGCTTGGAAAGTTGTTCAGTCCTTACACAATGGGGC
ATTTTCAACTGCCTCATCGTATTGTGATGGCACCCCTGACAAGGATGAGG
TCTGGACCGTGCCAAGTCCCGACTCTTCTCAATGCCGAGTATTACGCCCA
GCGTGCGTCAGCAGCCCTTATTATTGGCGAGGCCACATACGTCGCACCAG
AGGGGTATGGTTACTGCAATAGTCCGGGTATCGTGAGCGACGAGCAGGTT
GAAGGTCACAAGCTCTTGACCCAGGCAGTTCACGACAAAGGCGgtctctt
ttttcttcaactGTGGCACGTGGGGCGGATATCACACCCCTCTATGCAGC
CACAAGGACAACTTCCTGTCGCTCCCAGCGGCATTGCGCCCAAGGATGTG
AATGCTGCCACACATATGGGGCGACTACCCATTCCTACTCCTCGATCCCT
AACGACATCGGAAATCCAGTCAATGGTCGTAGAACCTTTCAGAAAAGCAG
CATGCAATGCCCGAAGGGCTCATTACGACGGTGTTGAGATTCACGCTGCC
AACGGTTACCTTCTAGAGCAATTTTTGAGTGACGGCACCAACCACCGTAC
GGATCAGTATGGTGGTAATATCGAGAATCGCTTTCGTGTCTTGCGCGAAG
TATGCACAGCCGTCATTGACGCTTGGGACGGCGACGGTCGGAGGGTCGGA
GTACGTTTATCCCCGTCTGGGACGTTCAATGATATGGCGGACTCGGACTG
GATGAGTCACTGGACTTATATCGTCCGAGAATTGGATAAATTAGGCTTGG
CCTACCTGCATGTCGTCGAGCCACGCATCGACGGGAGTGCGGATCGTTAC
ACGGACAGGGAGACAAAAATCTCTACTACGTGGCGGAAGACGTGGAGAAA
CATCTGGTCAGGCACCTTGATTGGAGCGGGTGGGTACACGCGACGAACGG
CCGAGGCCGCACTTCGAAATAAGGACCTTGACCTTGTGTGCTTTGGACGC
AAGTTCATCTCCAATCCAGATTTGCCTGCGCGTTTCGCGGCGGCCGCCAG
GTCGGATGCcggacagagggaggccagCCGGGAGCAAGGTAGACGGGGGA
GCAATGATAAAGGCTTTCacacagaggagggagaaatcggaggagaggaa
cgggaagaagacgacgacgatgTCTCCTTCTTGAATCCTTATGAAAGAGA
GACGTTTTACGGGGGCGGTGCGCAGGGCTACACAGACTACCCTTTTTGGA
AAAAGGGCGAGACAAGCTAA back to top
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