rna10403, rna10403 (mRNA) Nannochloropsis gaditana

Overview
Namerna10403
Unique Namerna10403
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length363
Alignment locationKK037279.1:16708..17758 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101531g1.3201.mrna
Orig protein idgnl|cribi|Naga_101531g1.3201
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037279.1supercontigKK037279.1:16708..17758 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101531g1gene10107Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20302.1cds10370Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10403rna10403-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10403 ID=rna10403|Name=rna10403|organism=Nannochloropsis gaditana|type=mRNA|length=363bp
ATGCCGCAAGTCCTTCTCTCTCCCCACAACATGGACATGACAGCCACCTT
CCTCTTCGATTCCGTGCGGTTTTTTACTGAAAATTGCCAGCGTTTTGTCA
AGGGAGGGGCATTGCGGAACTTGGTCGACAAAAAGGCGGGCGAGCGGCTT
TGGGGGGGGGGCGTTGTACGCACGTCGGAGATTTATATGATATCTTTTAT
TAGTTATTGGACGCATGAGGTGAATGTGCTTGGCTTGGAGAGTGCTGGAG
TGCATGGAATTAAACACCTTGTCGGGCTTGCTGGAGATGTACGACGACGA
CTAAGCTTCAGTGTTGCAATGTCGTGGCTTTCTTTGTTTGATTTACAATT
TCTTTTCCCTTGA
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protein sequence of rna10403

>rna10403-protein ID=rna10403-protein|Name=rna10403|organism=Nannochloropsis gaditana|type=polypeptide|length=140bp
MTVCFLRRPICTAFPSLTRRLPHGPPVYSRASLPTSFLAFPTLTTRVSAL
TFSTFSSSSSTPPSIPNTRLRRARRPHVPQRQEMRGPSFPPSLPPSLPPS
LLPSLSRLFPSFLFPFLLRFPFFLSFSFSLAVGSPRPSSH
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mRNA from alignment at KK037279.1:16708..17758-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10403 ID=rna10403|Name=rna10403|organism=Nannochloropsis gaditana|type=mRNA|length=1051bp|location=Sequence derived from alignment at KK037279.1:16708..17758- (Nannochloropsis gaditana)
TAGAGGGAGAACTTGAAGCAACCTCGCTAACCACCAAGAGCGAGTTAAGT
CCTCTCAGGTCAAAGTGGAGGCATTAAACGCAGTACTCCGCCACACTGAG
CACTTCTAGGGCGCAGAAAGGCACACTTTGAGGTGGTTGAGGCGTTATTG
AGTGGTTTCTGCTCGGAGAGATTGTTCATGTGGTGTCGTGTGGGACGTCT
TCGTGTGCATGACGTTCGGCTGAGTTAGATAAGCAACCCCACTGGCATTT
CTCAGACGCTTTAAAAGAGGGAAAGATAGACTCGCTCTTATAATTCGAAA
TAAAATGCAAGACATGCTAAGGTCGCTTCCTTGTACGCATGGTGCCAAAT
TTTATGGTGGGCTACTAGTCGGCTTTCATACATACAGGACATCTTGTGTC
CCTGTTACTGCCCTATGTCTATGTTGGAGGAAATTGAGAGAGAAATCGTT
TAAATGGATGGATGCCACAGCGAACCACCTAAGACTGCTAGAGTAATGCC
GTCCGTTGCGTCGTTGCCAACGTTTTGGGTCATACAGAGACTTTCTTATT
TCCTCCTCCTTCCCACTTTCCCCTTTGTGTTCCCCCCCTCCCTCCTCCCC
TCACCACCTCCAGACACCTCCCTCTGTGTGCATGACCGTCTGCTTTTTGC
GGCGGCCAATTTGTACAGCATTCCCCTCCCTCACCCGTCGTCTTCCGCAC
GGGCCGCCAGTCTACTCGCGCGCTAGCCTCCCAACCTCCTTCCTTGCATT
TCCGACTCTCACCACGCGCGTTTCCGCCCTCACTTTTTCCACATTTTCTT
CCTCTTCCTCGACACCACCGTCCATCCCCAATACCCGCTTGCGACGGGCG
CGCCGCCCGCACGTCCCTCAGCGCCAAGAAATGCGGGGTCCGTCATTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCTTCCCTCTCTC
GCCTCTTTCCCTCATTCCTTTTCCCCTTCCTTTTGCGCTTTCCCTTCTTC
CTCTCTTTTTCCTTCTCTTTGGCAGTAGGCTCTCCTCGCCCCTCCTCCCA
T
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Coding sequence (CDS) from alignment at KK037279.1:16708..17758-

>rna10403 ID=rna10403|Name=rna10403|organism=Nannochloropsis gaditana|type=CDS|length=420bp|location=Sequence derived from alignment at KK037279.1:16708..17758- (Nannochloropsis gaditana)
ATGACCGTCTGCTTTTTGCGGCGGCCAATTTGTACAGCATTCCCCTCCCT
CACCCGTCGTCTTCCGCACGGGCCGCCAGTCTACTCGCGCGCTAGCCTCC
CAACCTCCTTCCTTGCATTTCCGACTCTCACCACGCGCGTTTCCGCCCTC
ACTTTTTCCACATTTTCTTCCTCTTCCTCGACACCACCGTCCATCCCCAA
TACCCGCTTGCGACGGGCGCGCCGCCCGCACGTCCCTCAGCGCCAAGAAA
TGCGGGGTCCGTCATTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCTTCCTTCCCTCTCTCGCCTCTTTCCCTCATTCCTTTTCCCCTTCCT
TTTGCGCTTTCCCTTCTTCCTCTCTTTTTCCTTCTCTTTGGCAGTAGGCT
CTCCTCGCCCCTCCTCCCAT
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Synonyms
Publications