rna10399, rna10399 (mRNA) Nannochloropsis gaditana

Overview
Namerna10399
Unique Namerna10399
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037279.1:13004..13879 -

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101480g1.9901.mrna
Orig protein idgnl|cribi|Naga_101480g1.9901
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037279.1supercontigKK037279.1:13004..13879 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101480g1gene10103Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20308.1cds10366Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10399rna10399-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

protein sequence of rna10399

>rna10399-protein ID=rna10399-protein|Name=rna10399|organism=Nannochloropsis gaditana|type=polypeptide|length=112bp
MGSRAALSLPRVILSISDYSRWVGDGSMSCADQFCKKGGGGEDCEAKNIL
ATREVRFLMHDYIKNESRAGRVAGYPVKNDEVGDARVDSRVFGNGFWVLV
EEVTLLLASCSS
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mRNA from alignment at KK037279.1:13004..13879-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10399 ID=rna10399|Name=rna10399|organism=Nannochloropsis gaditana|type=mRNA|length=876bp|location=Sequence derived from alignment at KK037279.1:13004..13879- (Nannochloropsis gaditana)
GCAGGCATTCCGCCCGTCGCGGTGGACCGAAAATGGCCGAGCCCTCCAAA
ACCAACTGCCCAAAGGCGCGTACGTTCCGTTCGGGGTGGGTGCCCGAAGT
TGTCTAGGCATGCGCCTCGCACAGGCTGAGGCCCTCATCGTCTTGACCAT
CTTGTTGAAGTCGCTAACGTTCCAAGTAACGGACGGACATCCGTTAAAAG
TGAAGTACTTGGGGGCGGCGGATTTTGTGGGGGGGGTGCATGTGAGCGTG
GGCGGGATGCGGCCGTAAGTCCCGCCCTTGGAGCCCCTTGCTCGGTGTTT
TGTGACTAGAAGCACTGACTGTAAGGGATGCGTGGATACGAAACGCGCTA
CGTTTTCTTGGCGTGATGATGGGTGAGCTTGCATGCAGCCATGGGGTCAA
GGGCAGCTCTGTCCCTTCCTCGTGTTATCTTGAGTATCTCTGACTACAGC
CGATGGGTGGGCGATGGTTCGATGAGTTGCGCGGACCAATTTTGTAAGAA
GGGTGGAGGAGGGGAAGATTGTGAAGCAAAGAATATACTAGCAACGAGAG
AGGTGAGATTCTTGATGCATGACTACATCAAAAATGAAAGTAGAGCAGGG
CGAGTCGCCGGCTATCCCGTCAAAAACGATGAAGTGGGAGACGCGCGAGT
CGACTCACGAGTTTTTGGGAATGGATTTTGGGTGCTGGTGGAAGAAGTGA
CTCTCTTACTCGCTTCCTGCTCATCGTGAGGGCGTTTGATTCTTTTCAAC
GGAGTGAAACCTCCCGTGGCGCACCATGTGAAATGCCCGGGAGGTAACAT
ATAGGGGAAAAATACGACAAGAAGCGCGGGTTTTTGGTTCACTGGGTCTG
AAGAATGGATCACATAGTTGATTTCG
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Coding sequence (CDS) from alignment at KK037279.1:13004..13879-

>rna10399 ID=rna10399|Name=rna10399|organism=Nannochloropsis gaditana|type=CDS|length=339bp|location=Sequence derived from alignment at KK037279.1:13004..13879- (Nannochloropsis gaditana)
ATGGGGTCAAGGGCAGCTCTGTCCCTTCCTCGTGTTATCTTGAGTATCTC
TGACTACAGCCGATGGGTGGGCGATGGTTCGATGAGTTGCGCGGACCAAT
TTTGTAAGAAGGGTGGAGGAGGGGAAGATTGTGAAGCAAAGAATATACTA
GCAACGAGAGAGGTGAGATTCTTGATGCATGACTACATCAAAAATGAAAG
TAGAGCAGGGCGAGTCGCCGGCTATCCCGTCAAAAACGATGAAGTGGGAG
ACGCGCGAGTCGACTCACGAGTTTTTGGGAATGGATTTTGGGTGCTGGTG
GAAGAAGTGACTCTCTTACTCGCTTCCTGCTCATCGTGA
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Synonyms
Publications