rna10395, rna10395 (mRNA) Nannochloropsis gaditana

Overview
Namerna10395
Unique Namerna10395
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length291
Alignment locationKK037279.1:6810..7359 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100831g1.9436.mrna
Orig protein idgnl|cribi|Naga_100831g1.9436
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037279.1supercontigKK037279.1:6810..7359 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100831g1gene10099Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10395rna10395-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20310.1cds10363Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10395 ID=rna10395|Name=rna10395|organism=Nannochloropsis gaditana|type=mRNA|length=291bp
ATGCCTCATCGAAACCCTGTATCTCCACCATGCACACGCAGGCAGGGGTA
TAAGATAGCTGTATCCCACAGTGGTGGAGGATTTCTGTCTATTGTGGGCT
CTCCTTGGTACTCGTCTTTACATGCTTTCTTTTCTAGTCGGCCATCCGTG
CGAGTAATTTTGGTATTGCACAAAGACCCGTCGACTAAACGGCAGCCAAG
AGCAGACATGACCAATCTCATAAGACCTGTCGCTTTGGTGGATTTGGCGG
CAGCCTTTGCCCGCATGGGAAGACCCTCGTCAAACCGGTAA
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protein sequence of rna10395

>rna10395-protein ID=rna10395-protein|Name=rna10395|organism=Nannochloropsis gaditana|type=polypeptide|length=85bp
MRSALFSTGYLNPTIGGTSATQHSNVDKNNGNGLLPLPCARKASLKSHQH
FLRDDITSSLSMHEICIKDNKTLSNTPVVNSILPL
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mRNA from alignment at KK037279.1:6810..7359-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10395 ID=rna10395|Name=rna10395|organism=Nannochloropsis gaditana|type=mRNA|length=550bp|location=Sequence derived from alignment at KK037279.1:6810..7359- (Nannochloropsis gaditana)
ATGAGGTCGGCGTTGTTTTCTACCGGATATCTAAATCCAACGATAGGAGG
AACAAGTGCAACGCAACATTCCAATGTTGACAAGAACAACGGAAATGGTC
TCTTGCCACTTCCTTGCGCCCGAAAAGCGTGTGTGCAAGGAATTATGTCT
CGCTTGTTCCATCATGTGCGTATCAATCGACAAGTTTAGTACTTATGCGC
GCATGGCCATGAAATGATTGGGTGAAAGACACAAAGGGCAGAGCTTCGCC
CTTCGCAAGCCTTCTCCGCGCTGTTCAAAAAGTGATTGCTGCCCATCTTC
CTTTTTCTTCATTTTGTGAGGTTGTCGACAAGAAGTACATGGAATCTATA
TGCCTCGTGTTGGAGACGCATCTTTGAGAGAACGCGTCGCTCTCCCAATG
TAACCACTTTGTCATACTTAAGCATTGAAGTCCCATCAACACTTCCTCCG
CGATGATATCACGTCAAGCCTAAGTATGCACGAGATTTGCATAAAAGACA
ACAAGACGTTAAGTAATACACCTGTCGTCAATAGCATACTCCCACTGTGA
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Coding sequence (CDS) from alignment at KK037279.1:6810..7359-

>rna10395 ID=rna10395|Name=rna10395|organism=Nannochloropsis gaditana|type=CDS|length=516bp|location=Sequence derived from alignment at KK037279.1:6810..7359- (Nannochloropsis gaditana)
CATTGAAGTCCCATCAACACTTCCTCCGCGATGATATCACGTCAAGCCTA
AGTATGCACGAGATTTGCATAAAAGACAACAAGACGTTAAGTAATACACC
TGTCGTCAATAGCATACTCCCACTGTGAATGAGGTCGGCGTTGTTTTCTA
CCGGATATCTAAATCCAACGATAGGAGGAACAAGTGCAACGCAACATTCC
AATGTTGACAAGAACAACGGAAATGGTCTCTTGCCACTTCCTTGCGCCCG
AAAAGCGTCATTGAAGTCCCATCAACACTTCCTCCGCGATGATATCACGT
CAAGCCTAAGTATGCACGAGATTTGCATAAAAGACAACAAGACGTTAAGT
AATACACCTGTCGTCAATAGCATACTCCCACTGTGAATGAGGTCGGCGTT
GTTTTCTACCGGATATCTAAATCCAACGATAGGAGGAACAAGTGCAACGC
AACATTCCAATGTTGACAAGAACAACGGAAATGGTCTCTTGCCACTTCCT
TGCGCCCGAAAAGCGT
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Synonyms
Publications