rna10295, rna10295 (mRNA) Nannochloropsis gaditana

Overview
Namerna10295
Unique Namerna10295
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length477
Alignment locationKK037270.1:20015..21632 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101237g2.2232.mrna
Orig protein idgnl|cribi|Naga_101237g2.2232
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037270.1supercontigKK037270.1:20015..21632 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101237g2gene9996Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10295rna10295-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20409.1cds10264Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10295 ID=rna10295|Name=rna10295|organism=Nannochloropsis gaditana|type=mRNA|length=477bp
GGCTTTTCGCGTTTTCATCACGCGTTGAAATTTTGGTTGACATTCTGACC
GAATCCTAAAACATTACAACATTAAAGGGTGGTTTCCCCTGTACAGAGGG
TCCAAAGATAGAAGATGGTATTTGCGGGTGTGTGGCCTTTGTCGACTGTT
GGCACAACTCCTGCAGCACGGGACTCTCCTGCGAGCAACACACGCCATGA
GACAGATGTATCTGTGCAAGCCTCGGATTCAACGCCATCTTCTTCTTTCC
CTAGCGTGGCCGCGGATGGCAGCACTCCGAACCATGTGACTCATCACCCT
GCCCTCAGTGACATGGTGGCCCCCTTGGCGCCAGAGGCCTTACTGGACGC
GGTCAACGAAGGAAGCGTCAGTCTCGTGAATTCTCTGTTGTCGCAGGAGC
CCTCCCTGGCCAATCACAGGGATGGCTTCGGTCAGGTGAGTGGTTGTGTG
AGAGAGGACAAATGAGGCAGGTCGGGA
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protein sequence of rna10295

>rna10295-protein ID=rna10295-protein|Name=rna10295|organism=Nannochloropsis gaditana|type=polypeptide|length=225bp
MARERNNPECVALLEMAEKAYLMRRARRLLREGEAWAHVLEDTLRGMPRW
LTERVRGAKERWPYMQPEPDLDEEVVETEDGKQDLKEEGGGTGWESEACE
LRSPLYSFSDACEELEEEEEEEVGEGGDGREEKVLFDCPSLYFAAPPSTS
PSQPSVLPPYFHAFSTAFASPFCRQMSTTTPRREGEEEEAQDKARQAASV
DSAVAHYVKRRMSYDVFLTLQELVV
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mRNA from alignment at KK037270.1:20015..21632+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10295 ID=rna10295|Name=rna10295|organism=Nannochloropsis gaditana|type=mRNA|length=1618bp|location=Sequence derived from alignment at KK037270.1:20015..21632+ (Nannochloropsis gaditana)
ctcggtccacaaccGACCGGCGGCGGTGCGCGTcctgctggaggcggggc
ggaTTTCCTGCACAGGAACGACGAGGGCAAGACCGCTCTaggtaggaggg
gagggagggaggagcggaggcagggaggagtggagggagggaggaccgga
gggagggaggcactaCCGATACTTGGCTCGCGTCTTGCGTTTCCGCACTC
CTTGTCGCTCTGTGCCCTTTGGATTAAGCGAAGCGAGACCCTCacaatcc
ttccctccatccctccctccctcccccccttctttccctccctttcttcc
ttcctcgccccccctccttccctcccctcgtccttcctccAGACATGGCC
AGAGAACGCAACAACCCCGAGtgcgtcgccctcctcgagatggcggagaa
ggcctACCTGATGCGACGAGcccggcgcctcctccgagagggcgaggcgt
GGGCCCATGTGCTTGAAGATACCTTAAGGGGCATGCCGAGGTGGCTGACG
GAGAGGGTACGGGGGGCGAAAGAGAGATGGCCCTACATGCAGCCCGAGGT
ACGGCCTATCCGATTTTTTAcgctctgtccctcctcactcctcctcATAT
TTtatgcttttcctccctccctcctcatcccttcctatgtttttcctccc
tttctccccagCCCGatctggacgaggaggtcgTCGAgaccgaggacggg
aagcaggacctgaaggaggagggggggggcacggggtGGGAGTCGGAAGC
ATGTGAGCTCAGGAGCCCTCTATACTCCTTCTCCGATGCCTgcgaggagt
tggaggaggaggaggaagaggaagtgggggagggcggggacggccgggag
gagaaagtgcTCTTcgactgcccctccctctacttcgcagcccccccctc
tacctccccctctcagCCCTCCGTCCTACCTCCTTACTTCCACGCCTTTT
CGACGGCTTTCGCATCCCCCTTTTGCCGACAAATGTCTACGACgacgccg
aggagggagggggaagaggaggaggctcagGACAAGGCGAGGCAGGCTGC
CTCCGTGGACAGCGCCGTCGCTCATTACGTTAAAAGAAGAATGTCGTACG
ACGTGTTCCTGACGCTCCAAGAGCTCGTCGTTTGAGAGGGTGTGAGAGGA
GGGGTTagagggcggtggacgaggagcacGAAGGACAAGCTGTTGCAGAC
GGCGGAAATATTATGAATCCTTTCCCTGTCGTTTTCAGTCGGTGCGCTTA
AGCCACCGATCAGCCCCTTTGCGCAATATCTTTCCCGCATGCCATAGAAA
TAGAGCGAGTATATTTGGCAGGATTCAGTAGAATTGAAAGTTGTTGGCTA
CCTATCAAAACGAACATCAATAGAACTGGATGAGGAGTAATTTGACCTAA
AAATATCCATATAGTCGAATAAAGTGTTAGAAGGACATAGAGAGCGCATC
ATTGATCAAATCCAAAAATATACATAagtaggaagaaaaaaggccaATAC
GAGCGAGGAGCGTCAGGTACCTGGAAGAGCCCAAAGAGATGCCACCTTCG
ATCGATTGACCGCTCGTCAAATGAGCAATCAGCCAATTTAAATAAACACA
CAAGGATAAGGTCGGAAG
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Coding sequence (CDS) from alignment at KK037270.1:20015..21632+

>rna10295 ID=rna10295|Name=rna10295|organism=Nannochloropsis gaditana|type=CDS|length=1356bp|location=Sequence derived from alignment at KK037270.1:20015..21632+ (Nannochloropsis gaditana)
ATGGCCAGAGAACGCAACAACCCCGAGtgcgtcgccctcctcgagatggc
ggagaaggcctACCTGATGCGACGAGcccggcgcctcctccgagagggcg
aggcgtGGGCCCATGTGCTTGAAGATACCTTAAGGGGCATGCCGAGGTGG
CTGACGGAGAGGGTACGGGGGGCGAAAGAGAGATGGCCCTACATGCAGCC
CGAGCCCGatctggacgaggaggtcgTCGAgaccgaggacgggaagcagg
acctgaaggaggagggggggggcacggggtGGGAGTCGGAAGCATGTGAG
CTCAGGAGCCCTCTATACTCCTTCTCCGATGCCTgcgaggagttggagga
ggaggaggaagaggaagtgggggagggcggggacggccgggaggagaaag
tgcTCTTcgactgcccctccctctacttcgcagcccccccctctacctcc
ccctctcagCCCTCCGTCCTACCTCCTTACTTCCACGCCTTTTCGACGGC
TTTCGCATCCCCCTTTTGCCGACAAATGTCTACGACgacgccgaggaggg
agggggaagaggaggaggctcagGACAAGGCGAGGCAGGCTGCCTCCGTG
GACAGCGCCGTCGCTCATTACGTTAAAAGAAGAATGTCGTACGACGTGTT
CCTGACGCTCCAAGAGCTCGTCGTTTGAATGGCCAGAGAACGCAACAACC
CCGAGtgcgtcgccctcctcgagatggcggagaaggcctACCTGATGCGA
CGAGcccggcgcctcctccgagagggcgaggcgtGGGCCCATGTGCTTGA
AGATACCTTAAGGGGCATGCCGAGGTGGCTGACGGAGAGGGTACGGGGGG
CGAAAGAGAGATGGCCCTACATGCAGCCCGAGCCCGatctggacgaggag
gtcgTCGAgaccgaggacgggaagcaggacctgaaggaggaggggggggg
cacggggtGGGAGTCGGAAGCATGTGAGCTCAGGAGCCCTCTATACTCCT
TCTCCGATGCCTgcgaggagttggaggaggaggaggaagaggaagtgggg
gagggcggggacggccgggaggagaaagtgcTCTTcgactgcccctccct
ctacttcgcagcccccccctctacctccccctctcagCCCTCCGTCCTAC
CTCCTTACTTCCACGCCTTTTCGACGGCTTTCGCATCCCCCTTTTGCCGA
CAAATGTCTACGACgacgccgaggagggagggggaagaggaggaggctca
gGACAAGGCGAGGCAGGCTGCCTCCGTGGACAGCGCCGTCGCTCATTACG
TTAAAAGAAGAATGTCGTACGACGTGTTCCTGACGCTCCAAGAGCTCGTC
GTTTGA
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Synonyms
Publications