rna10276, rna10276 (mRNA) Nannochloropsis gaditana

Overview
Namerna10276
Unique Namerna10276
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length406
Alignment locationKK037269.1:8820..9149 +

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_104235g1.2735.mrna
Orig protein idgnl|cribi|Naga_104235g1.2735
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037269.1supercontigKK037269.1:8820..9149 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_104235g1gene9979Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10276rna10276-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20428.1cds10245Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10276 ID=rna10276|Name=rna10276|organism=Nannochloropsis gaditana|type=mRNA|length=406bp
CAGGGCTAAAGCGAGCACCGTGACGTAAGCACATTTAGCCATGGTTGACA
AACGAAGCCTGCTTTCGTCGGAGACTGCGGATGAATTGGGCGGGTATTCC
TCTTTTCCCCCCTCAAGCAGCGCTACTTTGCAGGAAGGGCCCTCCAGTGG
AAACAAAAAAGGCTGTCGGGATCCCCTTTTTCTGGTCGCTTTCATCCTGA
ATCTTGGCGTTATAGTCTGGCTGGCAGCCGATTACGGAGCAAGCGCACTT
AGAGATGCGCCACCTACCCAGGACGAAGATCCAGCCAAAATGCATGACGG
CCATCCCCTTATTATCCTTTGTGCGGCGCTGGCGGGCGTAGCAGGCGTCC
TCGCAGGGGCTTGGATGACCTTCATGATCAAGAAGGCGGCGGACATCATC
AAGTAA
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protein sequence of rna10276

>rna10276-protein ID=rna10276-protein|Name=rna10276|organism=Nannochloropsis gaditana|type=polypeptide|length=109bp
PFLPPSRPSPSATCGRSSASFLSRLPTSAPPPVPSTTSSRSCTQPMPSSS
SPSSGRSSGAWACTASSPTSRGQTRTRGREGRKAGGGERGGSLLLPPLGQ
LLLDLAGAA
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mRNA from alignment at KK037269.1:8820..9149+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10276 ID=rna10276|Name=rna10276|organism=Nannochloropsis gaditana|type=mRNA|length=330bp|location=Sequence derived from alignment at KK037269.1:8820..9149+ (Nannochloropsis gaditana)
cccttcctccctccctccaggccatcgccttctGCTACATGCGGGCGGTC
AAGCGCTTCATTCCTTTCGCGGCTGCCAACCTCCGCGCCGCCACCTGTGC
CGTCAACGACTTCTTCCCGGTCATGTACGCAGCCtatgccctcctcctcc
tcgccttcctctggTCGGTCGTCTGGAGCGTGGGCATGTACGGCGTCATC
GCCTACTTCCAGAGGGCAGACGAGGAcccggggcagggagggtcggaagg
cggggggaggggagcgtggCGGGAGTCtactacttcctcctcttggtcaG
CTTCTTCTGGACCTTGCAGGTGCGGCCTAA
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Coding sequence (CDS) from alignment at KK037269.1:8820..9149+

>rna10276 ID=rna10276|Name=rna10276|organism=Nannochloropsis gaditana|type=CDS|length=330bp|location=Sequence derived from alignment at KK037269.1:8820..9149+ (Nannochloropsis gaditana)
cccttcctccctccctccaggccatcgccttctGCTACATGCGGGCGGTC
AAGCGCTTCATTCCTTTCGCGGCTGCCAACCTCCGCGCCGCCACCTGTGC
CGTCAACGACTTCTTCCCGGTCATGTACGCAGCCtatgccctcctcctcc
tcgccttcctctggTCGGTCGTCTGGAGCGTGGGCATGTACGGCGTCATC
GCCTACTTCCAGAGGGCAGACGAGGAcccggggcagggagggtcggaagg
cggggggaggggagcgtggCGGGAGTCtactacttcctcctcttggtcaG
CTTCTTCTGGACCTTGCAGGTGCGGCCTAA
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Synonyms
Publications