rna10269, rna10269 (mRNA) Nannochloropsis gaditana

Overview
Namerna10269
Unique Namerna10269
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length471
Alignment locationKK037268.1:40221..40872 -

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101487g1.10706.mrna
Orig protein idgnl|cribi|Naga_101487g1.10706
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037268.1supercontigKK037268.1:40221..40872 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101487g1gene9973Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20435.1cds10238Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10269rna10269-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10269 ID=rna10269|Name=rna10269|organism=Nannochloropsis gaditana|type=mRNA|length=471bp
ATGGGAGATTCCAGTGTCTATATCACATTTATTTATACCCAGCAACACCA
TGTTCGTTGTTCGTCACAGAAAGGCTTTTCTCGTGCGGAAGCGATGAAAA
AGTTGGAGGGAAAGGGTGGAGGGAACGAGACGTCATCTCTCGGAAACCGA
CGGGGGAGATGGAGAGGAAGGGCGGAGGAGAAACCTCAGAAAATCGAGTC
GAGGGGAAAGGGTGAAAGACAGGGAAGAAACGCAAGAGCTTGCGTCGGAA
ATGAAAGGAGGTGCATGGAAGGGAAATCGGGAACTGGAGCCCCAGAAACC
TTCGTCTTCAAATTTTTTAAATGCTGGAATCAAAGGGGGACACATGCATG
CCATTTGAAGGGTTGCCTATATTTTGAAGGGATTTTTCTCCCCTTTGTCC
CTACGGCCACACGATTCCTCTTCAATATGTATAAACATTTTGTCCTAGCA
TTTTACCCAGGGTCGTCCTGA
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protein sequence of rna10269

>rna10269-protein ID=rna10269-protein|Name=rna10269|organism=Nannochloropsis gaditana|type=polypeptide|length=173bp
MHHAACISPSPSYQSQKNEKEHNQRSLMRNQVRPRPARGGERQLSEEAAT
PHCHVPSTPASDFYDISSPPNPAWPSRVQMVASLPAQAALVNPKHVTVPR
HNYPFTHNRAMPSRASGLEEGEEGEGEDAGEEGRKQLRVGSPSAMMGWML
TGDKVREGGREGGREGGREGGRR
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mRNA from alignment at KK037268.1:40221..40872-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10269 ID=rna10269|Name=rna10269|organism=Nannochloropsis gaditana|type=mRNA|length=652bp|location=Sequence derived from alignment at KK037268.1:40221..40872- (Nannochloropsis gaditana)
CCACCAGGCTGCTGCAGGTGTCAATATTGTGTGGGGATGATGCCGTCAAC
TACGGGCAGAACACGCCTCCTGTAGGGTCTTACAGTGCCCTACGATCTTC
TGACTGAGCAATCAGGCACCGCAAGCACAGTAATGCACCATGCTGCATGC
ATTTCTCCTTCACCTTCCTACCAGTCCCAAAAAAATGAAAAAGAGCACAA
TCAACGAAGCCTGATGAGAAATCAAGTCCGGCCACGGCCCGCCCGGGGCG
GAGAAAGGCAGTTGTCTGAGGAAGCTGCAACCCCACATTGTCACGTACCA
TCAACACCAGCGTCAGATTTTTACGATATATCATCTCCTCCCAATCCTGC
GTGGCCGTCGCGCGTGCAAATGGTCGCTTCCCTGCCCGCACAGGCCGCAC
TTGTCAATCCAAAGCATGTAACTGTTCCCCGTCACAACTATCCTTTTACC
CACAATCGGGCCATGCCCTCCCGTGCGAGTGGTTTGGAAGAAGGGGAGGA
GGGCGAGGGGGAGGACGCGGGGGAGGAGGGGAGGAAACAGCTCCGGGTGG
GGTCTCCATCGGCCATGATGGGATGGATGCTGACAGGGGACAAGGTAAGG
GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAG
GG
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Coding sequence (CDS) from alignment at KK037268.1:40221..40872-

>rna10269 ID=rna10269|Name=rna10269|organism=Nannochloropsis gaditana|type=CDS|length=520bp|location=Sequence derived from alignment at KK037268.1:40221..40872- (Nannochloropsis gaditana)
ATGCACCATGCTGCATGCATTTCTCCTTCACCTTCCTACCAGTCCCAAAA
AAATGAAAAAGAGCACAATCAACGAAGCCTGATGAGAAATCAAGTCCGGC
CACGGCCCGCCCGGGGCGGAGAAAGGCAGTTGTCTGAGGAAGCTGCAACC
CCACATTGTCACGTACCATCAACACCAGCGTCAGATTTTTACGATATATC
ATCTCCTCCCAATCCTGCGTGGCCGTCGCGCGTGCAAATGGTCGCTTCCC
TGCCCGCACAGGCCGCACTTGTCAATCCAAAGCATGTAACTGTTCCCCGT
CACAACTATCCTTTTACCCACAATCGGGCCATGCCCTCCCGTGCGAGTGG
TTTGGAAGAAGGGGAGGAGGGCGAGGGGGAGGACGCGGGGGAGGAGGGGA
GGAAACAGCTCCGGGTGGGGTCTCCATCGGCCATGATGGGATGGATGCTG
ACAGGGGACAAGGTAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGAGGG
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Synonyms
Publications