rna10265, rna10265 (mRNA) Nannochloropsis gaditana

Overview
Namerna10265
Unique Namerna10265
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length516
Alignment locationKK037268.1:24362..25127 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101608g1.10025.mrna
Orig protein idgnl|cribi|Naga_101608g1.10025
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037268.1supercontigKK037268.1:24362..25127 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101608g1gene9968Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20439.1cds10234Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10265rna10265-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10265 ID=rna10265|Name=rna10265|organism=Nannochloropsis gaditana|type=mRNA|length=516bp
ATGGAGGCCGTCTCTTCGTCCGACGACCAGGCCGCTGCCTCGGACGAGGG
CTACGAGACCGAGGAGGAGGAGGCGCCGGAGCCTGGCGGCGAATCTCCGT
GGAAACGACGAAACAACGACGCGGGCGAGGTTGCCGGGCTCGGGGAGGGA
AAAGGACTGGAAGGGGAAAATGTCGAGGCGAAGAAGAGGAAGAGGGAGGG
TTGTGGGGGTAGCACGGGGGAACGGAGGGCGAGAGGAGTCTTGGACGTGG
TGCGGCGCCAGATGACGGGAGAGCTCCCCTCTTCCCACCCTGCCTCGCGG
AATAAAGCCTTTGCCCTCAGCACCCTCCCCATGGAAAAGCTGCTGGGAGG
GAGGAATGGGGAGGGCGAAGTAGGAGGGGTAAGAGAGAAGGAGAGCGTTC
TGGGGGCGGCATCAGGGGAGAGGAGGGGTGGTGAAGGGAAGGTCGAGCGC
AACAAGCAGGAGCGAGACAAGAAAACGATTGCGCGGATTAAAAAGCTGAT
CAAATACAGACGTTGA
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protein sequence of rna10265

>rna10265-protein ID=rna10265-protein|Name=rna10265|organism=Nannochloropsis gaditana|type=polypeptide|length=183bp
MLGMEEVNHLNGAPFNQDDGSDEQKMRDVSNTAAPASHRAVESLDESNRQ
LTATESLQQPPPEEAQHRQGLETTVAIPSPAPVLPIPQPLPPPPLSAAPP
QPPVRLKLKPLPPPSSTASIEDSVASSSTPVNFSSAPLRLKLKPLPPPPP
TQPPSHLPSSSSSSSGPAFKLKFKIKPPPPPPE
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mRNA from alignment at KK037268.1:24362..25127-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10265 ID=rna10265|Name=rna10265|organism=Nannochloropsis gaditana|type=mRNA|length=766bp|location=Sequence derived from alignment at KK037268.1:24362..25127- (Nannochloropsis gaditana)
ATTACCTGCGATGATGACGAGGACGCTCGACGGCCGGGTGCATGTGGGAC
GATGGGGTCCACTGTCATGCGTTTCCGTGTTGCATCGTGGAGAGGTTGAC
CGGCTGGTGTCGTTTTTGACGCGACAGCACACTAAATGAGGCAGTTCACC
AGGTCATTTCCTCTTCCTCTTCCCTTCCTCCACTTTATTCTTCACAAGCC
ATCGACCGGTCTCAATGCTGGGCATGGAGGAAGTGAACCACTTGAATGGG
GCACCTTTCAACCAGGATGACGGATCCGATGAACAAAAGATGAGAGACGT
GTCCAATACGGCGGCACCTGCGTCCCATCGGGCAGTTGAGAGCCTGGATG
AAAGCAACAGACAGCTGACTGCAACAGAATCACTGCAGCAACCACCACCG
GAGGAAGCGCAGCATCGCCAGGGGCTAGAAACCACTGTAGCAATACCCTC
ACCTGCGCCTGTGCTCCCTATACCGCAACCCCTCCCTCCCCCCCCTCTGA
GCGCCGCTCCTCCCCAACCTCCTGTCCGTCTGAAGCTCAAACCCCTCCCT
CCTCCCTCATCCACCGCTTCCATCGAGGACTCCGTCGCCTCCTCCTCCAC
GCCCGTAAATTTTTCAAGTGCACCCCTGCGTCTCAAGCTGAAGCCTCTTC
CCCCTCCCCCTCCCACTCAACCTCCCTCCCACCTCCCCTCCTCCTCCTCC
TCCTCAAGTGGCCCTGCATTTAAGCTGAAATTTAAAATCAAACCGCCACC
TCCACCTCCCGAGTAA
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Coding sequence (CDS) from alignment at KK037268.1:24362..25127-

>rna10265 ID=rna10265|Name=rna10265|organism=Nannochloropsis gaditana|type=CDS|length=552bp|location=Sequence derived from alignment at KK037268.1:24362..25127- (Nannochloropsis gaditana)
ATGCTGGGCATGGAGGAAGTGAACCACTTGAATGGGGCACCTTTCAACCA
GGATGACGGATCCGATGAACAAAAGATGAGAGACGTGTCCAATACGGCGG
CACCTGCGTCCCATCGGGCAGTTGAGAGCCTGGATGAAAGCAACAGACAG
CTGACTGCAACAGAATCACTGCAGCAACCACCACCGGAGGAAGCGCAGCA
TCGCCAGGGGCTAGAAACCACTGTAGCAATACCCTCACCTGCGCCTGTGC
TCCCTATACCGCAACCCCTCCCTCCCCCCCCTCTGAGCGCCGCTCCTCCC
CAACCTCCTGTCCGTCTGAAGCTCAAACCCCTCCCTCCTCCCTCATCCAC
CGCTTCCATCGAGGACTCCGTCGCCTCCTCCTCCACGCCCGTAAATTTTT
CAAGTGCACCCCTGCGTCTCAAGCTGAAGCCTCTTCCCCCTCCCCCTCCC
ACTCAACCTCCCTCCCACCTCCCCTCCTCCTCCTCCTCCTCAAGTGGCCC
TGCATTTAAGCTGAAATTTAAAATCAAACCGCCACCTCCACCTCCCGAGT
AA
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Synonyms
Publications