rna10263, rna10263 (mRNA) Nannochloropsis gaditana

Overview
Namerna10263
Unique Namerna10263
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length993
Alignment locationKK037268.1:21142..21670 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101072g2.10027.mrna
Orig protein idgnl|cribi|Naga_101072g2.10027
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037268.1supercontigKK037268.1:21142..21670 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101072g2gene9966Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10263rna10263-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20441.1cds10232Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10263 ID=rna10263|Name=rna10263|organism=Nannochloropsis gaditana|type=mRNA|length=993bp
AGCAGCGCCTCCCCTTCGATATCCACCACTGTGGGGACGAGATCCTCGGC
TGCCTTGACAAGGAAACCTCCAATCAGGAGAAGGAAAACGGAGGAGACAG
CCTCTTCCCTTCGCCCAAGAAGGCTTTCCATGAGGAACCGAAAAAGGGAG
GGAAGGAGGAAGGGATGGAGGGGGAGGAGGAGGACGTCGTCCGGTTCCAA
GAGATGGTCTCCGGCAAGGAGCAGTATGAGGTCTGTCGTCTATTCCTCGC
CTCTCTGCAACTGGCGAACAACGGAAACGTACAGTTGGTGCACCAGGAGA
GCAACAAGGACGCCAACGGGCTCTCCTTCCGCCTCAAGCTTCTCTCCGAC
CAGCGCATGCACGAGCGATTCACCGGCGCGGAGCTTGGGAACATTGACAT
GTAAAGCCAGCAACGTTGTTGCGTTGGCTGCCTGCACACCCCGGGTACGC
ATGACTGCCGGGCAGTGCCAGGGCTGATGAAAAGGGAGCTGGGGGAAACC
GGACGGCTTGGTACCGTCGTCGTGTAGATATCGATCATAGGATCGATAGC
GCGTGAAATCCAGGCAAGGCAGGGTGGTGTCGAGATGCCACTGGAGTTCG
TGGATTGAAAAGACGGATGACATAGCGGAGATACTATCATCACGAAAAGT
TAGAGAGGGGCGGTATGGGGAAAGGTAAGAAATTGTGGAACAAGATATAT
CTCGTGGTAATTAACGTAAGTAGTAATGGGGGAAAAGAAAAAAACGGTGC
GCTGTAAAAACATATATGAATAGGGGCGGGGTGGTTCATTTGTATCCCTG
TCACTTGAAAGAGTAGCAGCCGCAGGACACAATACCAGGGATACCACGGC
GACACTCGAAATGCTAGATACCGATCATGTGCCCCCCTAGCTTTAGATTT
CTGGGCGGGGAAAACATGTGTTGTCGGCGCAAAGCCCGCTACAATGTATG
CATTGCTACCATGGAGTGCTGGTTCTTAAAAAACGTTCGCCTC
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protein sequence of rna10263

>rna10263-protein ID=rna10263-protein|Name=rna10263|organism=Nannochloropsis gaditana|type=polypeptide|length=106bp
MKPEFWPGPGAGQRAARGLANESILAMYALFGGTRPTGYALFDAPHPTLH
GSNAYIVAGFAPTTHVFPAQKSKARGAHDRYLAFRVSPWYPWYSHRFFLF
PHYYLR
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mRNA from alignment at KK037268.1:21142..21670-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10263 ID=rna10263|Name=rna10263|organism=Nannochloropsis gaditana|type=mRNA|length=529bp|location=Sequence derived from alignment at KK037268.1:21142..21670- (Nannochloropsis gaditana)
ATGAAACCAGAATTTTGGCCAGGGCCGGGGGCAGGACAGCGTGCGGCGCG
AGGTCTGGCTAATGAGTCTATTTTGGCTATGTATGCACTTTTTGGGGGCA
CACGCCCTACAGGCTATGCACTTTTCGACGCCCCACATCCGAGTCGCCTA
GTGTTGACATCCTCTGTCTTCTCTTCGTCAGAGGAGGCATAATTTGGCAG
TTAATCTCACACGAGAGCGCAAAGAAAAGTAAAAAAAGTAGAGACCGAGG
CGAACGTTTTTTAAGAACCAGCACTCCATGGTAGCAATGCATACATTGTA
GCGGGCTTTGCGCCGACAACACATGTTTTCCCCGCCCAGAAATCTAAAGC
TAGGGGGGCACATGATCGGTATCTAGCATTTCGAGTGTCGCCGTGGTATC
CCTGGTATTGTGTCCTGCGGCTGCTACTCTTTCAAGTGACAGGGATACAA
ATGAACCACCCCGCCCCTATTCATATATGTTTTTACAGCGCACCGTTTTT
TTCTTTTCCCCCATTACTACTTACGTTAA
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Coding sequence (CDS) from alignment at KK037268.1:21142..21670-

>rna10263 ID=rna10263|Name=rna10263|organism=Nannochloropsis gaditana|type=CDS|length=963bp|location=Sequence derived from alignment at KK037268.1:21142..21670- (Nannochloropsis gaditana)
CGCACCGTTTTTTTCTTTTCCCCCATTACTACTTACGTTAACACTCCATG
GTAGCAATGCATACATTGTAGCGGGCTTTGCGCCGACAACACATGTTTTC
CCCGCCCAGAAATCTAAAGCTAGGGGGGCACATGATCGGTATCTAGCATT
TCGAGTGTCGCCGTGGTATCCCTGGTATTATGAAACCAGAATTTTGGCCA
GGGCCGGGGGCAGGACAGCGTGCGGCGCGAGGTCTGGCTAATGAGTCTAT
TTTGGCTATGTATGCACTTTTTGGGGGCACACGCCCTACAGGCTATGCAC
TTTTCGACGCCCCACATCCGACGCACCGTTTTTTTCTTTTCCCCCATTAC
TACTTACGTTAACACTCCATGGTAGCAATGCATACATTGTAGCGGGCTTT
GCGCCGACAACACATGTTTTCCCCGCCCAGAAATCTAAAGCTAGGGGGGC
ACATGATCGGTATCTAGCATTTCGAGTGTCGCCGTGGTATCCCTGGTATT
ATGAAACCAGAATTTTGGCCAGGGCCGGGGGCAGGACAGCGTGCGGCGCG
AGGTCTGGCTAATGAGTCTATTTTGGCTATGTATGCACTTTTTGGGGGCA
CACGCCCTACAGGCTATGCACTTTTCGACGCCCCACATCCGACGCACCGT
TTTTTTCTTTTCCCCCATTACTACTTACGTTAACACTCCATGGTAGCAAT
GCATACATTGTAGCGGGCTTTGCGCCGACAACACATGTTTTCCCCGCCCA
GAAATCTAAAGCTAGGGGGGCACATGATCGGTATCTAGCATTTCGAGTGT
CGCCGTGGTATCCCTGGTATTATGAAACCAGAATTTTGGCCAGGGCCGGG
GGCAGGACAGCGTGCGGCGCGAGGTCTGGCTAATGAGTCTATTTTGGCTA
TGTATGCACTTTTTGGGGGCACACGCCCTACAGGCTATGCACTTTTCGAC
GCCCCACATCCGA
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Synonyms
Publications