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Properties
| Property Name | Value |
|---|
| Product | n -(beta-n-acetylglucosaminyl)-l-asparaginase |
| Orig transcript id | gnl|cribi|Naga_100112g1.5441.mrna |
| Orig protein id | gnl|cribi|Naga_100112g1.5441 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:976722..978257 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1017 ID=rna1017|Name=rna1017|organism=Nannochloropsis gaditana|type=mRNA|length=2596bp
TCGGAAGCGAAGGGAACGGGCAGTGCATGGGGGCGTTGGACGAGAGCAGT
CAGGACGGCGGGGAGGAGGAAAGCGTTGCCAAGGAGAGGGACGGCGCGGT
TTCCTCCCTGTATGCCTCCTACTTCATGACCCCCGAGAGTCGGCTGCCCA
TCAACCACCCCGACCACGCGTACTCCTTCCTGCCATTGCAGTCGCCCGGG
CTTGTCAAAGCCCCGGGTAGGGGGGGGAGAGGACTCGGACGCGGCGCTTG
GGAGACCTTGCCGGGGCTGTCAGGGACGAGCATCGTCGCTCTGGATTTCT
CTAGTGCACTCCCAGGAAGCCCGCTGTTGGCGGCGGCGTTGCTCCTAGAG
AAGGCAGGGAAGGAGGAGGGGGCGGTGGGCCCGACGCGCGTGCTCGTCCA
CCACTCGCAGACGCCGGCCACGGACCCTCTGCCCTCCCTGTCCTCAGGCC
TCGGGGACACCAGTCCCGACACACGCAGCCCTGCCTCTTCCCTCTCCTCC
CACCGGGCGGGCAAGCGCCGTGTCGCCTCTGAGTTCAACCTAGCCTCTCG
CGCCATGGCCTCCCTGCCCGCGAGTCCCTCCGCCCGCCCGCACGGTCGGA
GCCCGAGCGCCCATGGCTCTCTGTCTCCGGGCGCCTCTCCGCGGTTGTTG
CGCCGCCGTTCGGACCAGCAATCCCATCCGTTGTACCCGGTGGGAAACGT
GGGGCCGGGTCGACGCGCGAATGAGCCTGCTTCCTCCATGCGACGCCTCT
CGTCGGAGGCCGAGCTGAGGCGCACGTGGACCCAGAAGCCGCTGCACGAC
CCGAGGGAGCCAATGCCAGGCAGCAGGGTGGACGAGGGGGACCTGGGAGG
ACGGACGGCTGGCCTGGTCGCATTCAACGCCTTGGGGAAAAGCGCGCTTC
GCCGGCACCACAGTCTGGGACCCGACCGACAGGCGGACGGAGCACGGAGA
GCCGCTGCCCCCCCGTCCGGCCTGGCCTCACCCTCGAACCAGCCACGGCG
AGCCCTCTCGCTCTCCTCGAAATCGCACCTACATCGCCTTCACTCCGCGG
CTACCACGTCTCAGTTACAGCCGACGCAGCAGCAGCAGCAGCAGCCTCAC
CAGCAGTTCTCACACGGGCGAAACCGTGACATCTCGAGCCTCCATTTCTC
CCGGGTCCGGAAGCTGGCCGGGGCTTTGAAGCGGGAGGGCTCCTTGTTGG
CGGCGATGTCTCTGCTTAGCAACGAGGCGGACATTCAAGAAACGCAGTTC
GCCTCCCCTTCAACCTCCCTCGGTGTTATCGGCGTAATGTCACCTCCTTC
GTTCTCGACGACACACCTATCTTCTCTCAATATGGCTGTTTTGGGTGGAG
GAGAGCAGATTCGCAAGCACCAGACACCGGGTCACTCCCCACACTTGGAT
CCATCTCCATCCGTTTCTTCGCCTCGCTCTGGCACCCCGCCCAGCACCAT
CTCGTTCATGCAAACGTCGGCGCGCCCCCCCGGCCCGGGCCTCGGCCGCG
GTGTCCCTGGGAGGGAAATGGGAGAAGCGATATCAACCGTGCCTTGTCAC
GACTCCTGCCTTCAGTGCCAGCTTAATGACAGGGCTACCGAAGCCCCCCC
GGTGCCTGCTTTGTTCCCCTGGGCCCCTTTGACGGCGCAAATCAACAAGA
CCCGCGATATTGCCGACCTCTGCAAAGCCAACGCGCACGCGATGGAGCAG
TGGGGTTCCTCTCGTGGGAAGGAGTTAGCCAAGCTTTGGTCAATGCTCTT
CATTTCCGCCTCCGCCTGTTTGGATGCCTTGTGTGTAGAAGCAACACGCT
TGGTGACCGCGACAGTCGCCGGCCGCACGTCTATCGCGCTTTCCTCAGAG
GCTTTGCGGCCTTGGAGGGATGGACCATTGGGACGGCCGCTGGTTGAGAA
ACTCTTGACAGTATACGAGAAGGAAGGAGACGTTCAAACGCTGGCCACGA
TCGTATGTGTGCTTGACGTAGAGCATCCGGGCTCATTGCTTCAGGAAAGC
AAGCGCGCCGAGTATGATCGGTATTTGCGGGCCTACGCGGAGCTCCTTTA
CCGTTGGGGAGCTTTAGAGACGAGAGCAGAGGTTTTGAAAAGATTGTCTG
TATCGTCTTCCGCGTCGATATCTACAGAAGAATCTAAATGTGTGTCGATG
CGCCGGCAAGATATGGTGGTGGCATTGCGATGTGAAGCTTGCGGGAGCCT
TGATGGAGGAGTCGATGCGGGTACAGGTGTCTGTCAGAAGTGCAAGATGT
TCGCTTTTCGGTGCGTTATATGTCAGCTAGCGGTTCGCGGACAATCTATG
TTTTGTCTCAACTGCTCCCATGGTGGACACACTCCCCATGTGTGGGACTG
GTTCATAGAGAACGATATGTGCGCAAGTGGTTGTGGCTGTCGGTGTTTCT
TTGGTCAAAGCGTAGAAATCCAATGCAAATAGATGGTTGGGAGAATGGTA
GAAAAATAAGGGTGTTCAATGCGAGTAGGACAAAAGCATCAGGTAGCTTA
GGGTTTCCAACGTGTAAGGTATTCAAGCCCCTAAAGAAAGTCTTGCACAA
ATTTCATAAAACTCAGGATGTTTGCTCTCGATAATGGTGGCAGGTG back to topprotein sequence of rna1017 >rna1017-protein ID=rna1017-protein|Name=rna1017|organism=Nannochloropsis gaditana|type=polypeptide|length=382bp
MNLFAIMGVLVYYPAVSFASALPLVLNTWSEDFTGATRTAFDVISQATGR
GGRLDALEQGLNFCELHQCGGSVGFGGHSDASGEVTLDAMVMDGVTHDVG
GVGGLRRVKRAVSVARGVLEHTNHSLLVGEAATRFAVDFLGFEEESLSTP
ESVEEQAAWVAGGCQPNYYRAFDHCTSSCPPYVLQAPGTRESGTGQQMGR
WGRVGREEHRPRYSPYVEEGSRQQQQPSNHDTIGMVVVDREGELACGVTT
NGLGHKVPGRVGDSPVPGAGCYVERGVGGCACTGDGDVMMRFSPSARAVM
GMEAGMAPQEAAEAVVGSIARYYPDFRGGIVCADAGGGVGAAAWKLPLSF
STQSPETEGVQVYSVTPLGRKKGQAGDVARVS back to topmRNA from alignment at CM002456.1:976722..978257+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1017 ID=rna1017|Name=rna1017|organism=Nannochloropsis gaditana|type=mRNA|length=1536bp|location=Sequence derived from alignment at CM002456.1:976722..978257+ (Nannochloropsis gaditana)
GCGACTTAGGGGCCCTTCACATTTCATCTCAGACCAGAGTCGAGAGGTGA
TACGAACCAAAAGCAGAAAGGCCTAGGGTTCTCGGGGGTGtgatcttcct
ccatgtcatTGTGGAAGGTCTGCGTGCCCACTGCATCCGGCTCGCCAGCC
CCGCTGTTTCCTCTTCAAACAGCCTCGGGTGGTATTTTGTTTGTACTACA
TTCAACTCCTCATGACCAGAACCCTTCATGCGCCCAGGAAATTTGTCGAA
GAGGGAATTTGTGATTATCTTTTCGCGCTGATTTGGTCCCATCGGCTTCA
TCGCTTTGTTTCGTGCCGGCTCCAGGGAGTACAACCAACTTTGGCGAGAC
GGGGTCTCCCCTTGAACCCTTAAATAGGTTTTTGCCCATGAATTTATTCG
CAATCATGGGTGTCCTTGTCTACTATCCTGCCGTATCATTTGCATCTGCG
CTGCCTTTGGTGCTTAACACATGGAGCGAGGATTTTACGGGTGCGACGCG
CACAGCTTTTGACGTCATTTCCCAAGCaaccgggagaggaggtcgccTCG
ACGCTCTGGAGCAAGGGCTCAATTTTTGCGAACTGCACCAATGTGGCGGC
TCGGTTGGGTTCGGGGGCCACTCGGATGCCTCCGGTGAGGTGACCTTAGA
CGCCATGGTTATGGACGGCGTCACGCATGACGTaggcggcgtgggagggc
ttCGGCGGGTAAAGCGAGCCGTCTCTGTGGCCCGAGGCGTGCTCGAGCAC
ACGAACCACTCTTTGCtagtgggcgaggcggccacGCGCTTTGCCGTCGA
CTTCCTGGGCTTCGAAGAAGAGTCTCTGAGCACGCCGGAAAGCGTCGAGG
AGCAGGCCGCatgggtggcgggggggtgCCAGCCCAACTACTACCGGGCC
TTCGACCATTGCACGTCCTCGTGCCCGCCCTACGTGCTCCAGGCGCCAGG
CACTCGGGAAAGCGGAACAGGGCAGCAGATGGGGCGGTGGGGccgggtcg
ggagggaggagcatcGGCCTCGTTACTCGCCctatgtggaggagggcagt
cgccaacagcaacagcccAGCAACCACGACACGATCggcatggtggtggt
ggaccgAGAAGGGGAGCTGGCGTGCGGCGTTACTACCAATGGCCTCGGTC
ACAAGGTGCCCGGGCGCGTGGGCGACTCGCCCGTGCCAGGCGCCGGTTGC
TACGTGGAGcgcggggtgggaggttgtGCCTGTACTGGGGACGGCGACGT
GATGAtgcgcttttccccctcggcGCGGGCggtgatggggatggaggcgg
gcaTGGCGCCCCaagaggcggccgaggcggTGGTCGGGAGCATCGCCAGG
TACTATCCTGACTTCCGGGGGGGGATTGTCTGCGCGGacgcggggggcgg
ggtgggggcggcggcgtggAAGCTGCCGCTGTCATTCTCGACCCAGAGCc
cggagacggagggggtgcAAGTCTATTCGGTGACGCCgctggggaggaag
aagggccaGGCGGGGGATGTAGCGCGCGTGAGCTGA back to topCoding sequence (CDS) from alignment at CM002456.1:976722..978257+ >rna1017 ID=rna1017|Name=rna1017|organism=Nannochloropsis gaditana|type=CDS|length=1149bp|location=Sequence derived from alignment at CM002456.1:976722..978257+ (Nannochloropsis gaditana)
ATGAATTTATTCGCAATCATGGGTGTCCTTGTCTACTATCCTGCCGTATC
ATTTGCATCTGCGCTGCCTTTGGTGCTTAACACATGGAGCGAGGATTTTA
CGGGTGCGACGCGCACAGCTTTTGACGTCATTTCCCAAGCaaccgggaga
ggaggtcgccTCGACGCTCTGGAGCAAGGGCTCAATTTTTGCGAACTGCA
CCAATGTGGCGGCTCGGTTGGGTTCGGGGGCCACTCGGATGCCTCCGGTG
AGGTGACCTTAGACGCCATGGTTATGGACGGCGTCACGCATGACGTaggc
ggcgtgggagggcttCGGCGGGTAAAGCGAGCCGTCTCTGTGGCCCGAGG
CGTGCTCGAGCACACGAACCACTCTTTGCtagtgggcgaggcggccacGC
GCTTTGCCGTCGACTTCCTGGGCTTCGAAGAAGAGTCTCTGAGCACGCCG
GAAAGCGTCGAGGAGCAGGCCGCatgggtggcgggggggtgCCAGCCCAA
CTACTACCGGGCCTTCGACCATTGCACGTCCTCGTGCCCGCCCTACGTGC
TCCAGGCGCCAGGCACTCGGGAAAGCGGAACAGGGCAGCAGATGGGGCGG
TGGGGccgggtcgggagggaggagcatcGGCCTCGTTACTCGCCctatgt
ggaggagggcagtcgccaacagcaacagcccAGCAACCACGACACGATCg
gcatggtggtggtggaccgAGAAGGGGAGCTGGCGTGCGGCGTTACTACC
AATGGCCTCGGTCACAAGGTGCCCGGGCGCGTGGGCGACTCGCCCGTGCC
AGGCGCCGGTTGCTACGTGGAGcgcggggtgggaggttgtGCCTGTACTG
GGGACGGCGACGTGATGAtgcgcttttccccctcggcGCGGGCggtgatg
gggatggaggcgggcaTGGCGCCCCaagaggcggccgaggcggTGGTCGG
GAGCATCGCCAGGTACTATCCTGACTTCCGGGGGGGGATTGTCTGCGCGG
acgcggggggcggggtgggggcggcggcgtggAAGCTGCCGCTGTCATTC
TCGACCCAGAGCccggagacggagggggtgcAAGTCTATTCGGTGACGCC
gctggggaggaagaagggccaGGCGGGGGATGTAGCGCGCGTGAGCTGA back to top
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