rna10169, rna10169 (mRNA) Nannochloropsis gaditana

Overview
Namerna10169
Unique Namerna10169
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length213
Alignment locationKK037264.1:36796..37061 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101500g1.10238.mrna
Orig protein idgnl|cribi|Naga_101500g1.10238
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037264.1supercontigKK037264.1:36796..37061 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101500g1gene9872Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10169rna10169-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20537.1cds10138Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10169 ID=rna10169|Name=rna10169|organism=Nannochloropsis gaditana|type=mRNA|length=213bp
ATGCGTGACCACTGCACTGCCAGAGGAGTAACGGAATGGCCGGCGGCTCT
AGATTCAAATTTTCAAAATGACGTTTTCAAAGGGGGGGCAAAACGGCAAG
AAGTAAAACAGAAATTTCTGCACGAAAAACGGTGGGGGTTGACAGATGCT
CTTAAGGTAACGTCAAGTCGAAAGACCAATGAAGACACGCAATCAACAAG
TGTGGCCCTCTGA
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protein sequence of rna10169

>rna10169-protein ID=rna10169-protein|Name=rna10169|organism=Nannochloropsis gaditana|type=polypeptide|length=74bp
MLVECTEAFACNTSRLDLGGKEKGREGGREGEREKGRAGGKNAIHEMENQ
VSDLGEKGTEETAAQREAWKRFLG
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mRNA from alignment at KK037264.1:36796..37061-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10169 ID=rna10169|Name=rna10169|organism=Nannochloropsis gaditana|type=mRNA|length=266bp|location=Sequence derived from alignment at KK037264.1:36796..37061- (Nannochloropsis gaditana)
ATGCTCGTGGAGTGTACAGAAGCATTTGCATGCAACACCAGCAGGTTGGA
TCTAGGTGGGAAGGAGAAAGGGAGGGAGGGAGGGAGGGAGGGAGAGAGGG
AGAAAGGGAGGGCGGGCGGGAAGAATGCAATCCACGAAATGGAGAATCAG
GTGTCTGATTTGGTATGAAGCGCCTTCGATTTGATTTGATGATGAAATTG
GAGGGAGAGAAAGGGACAGAGGAGACGGCGGCCCAGAGGGAAGCCTGGAA
ACGCTTCCTGGGCTGA
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Coding sequence (CDS) from alignment at KK037264.1:36796..37061-

>rna10169 ID=rna10169|Name=rna10169|organism=Nannochloropsis gaditana|type=CDS|length=450bp|location=Sequence derived from alignment at KK037264.1:36796..37061- (Nannochloropsis gaditana)
GGAGAGAAAGGGACAGAGGAGACGGCGGCCCAGAGGGAAGCCTGGAAACG
CTTCCTGGGCTGAATGCTCGTGGAGTGTACAGAAGCATTTGCATGCAACA
CCAGCAGGTTGGATCTAGGTGGGAAGGAGAAAGGGAGGGAGGGAGGGAGG
GAGGGAGAGAGGGAGAAAGGGAGGGCGGGCGGGAAGAATGCAATCCACGA
AATGGAGAATCAGGTGTCTGATTTGGGAGAGAAAGGGACAGAGGAGACGG
CGGCCCAGAGGGAAGCCTGGAAACGCTTCCTGGGCTGAATGCTCGTGGAG
TGTACAGAAGCATTTGCATGCAACACCAGCAGGTTGGATCTAGGTGGGAA
GGAGAAAGGGAGGGAGGGAGGGAGGGAGGGAGAGAGGGAGAAAGGGAGGG
CGGGCGGGAAGAATGCAATCCACGAAATGGAGAATCAGGTGTCTGATTTG
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Synonyms
Publications