rna10157, rna10157 (mRNA) Nannochloropsis gaditana

Overview
Namerna10157
Unique Namerna10157
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length688
Alignment locationKK037264.1:12704..14530 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101633g1.9560.mrna
Orig protein idgnl|cribi|Naga_101633g1.9560
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037264.1supercontigKK037264.1:12704..14530 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101633g1gene9860Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20547.1cds10126Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10157rna10157-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10157 ID=rna10157|Name=rna10157|organism=Nannochloropsis gaditana|type=mRNA|length=688bp
CTTTTGGCAGCTAGCACGAGCTCGAGACGCTCACAAGCGAATTATGTTAC
ATTGGCACAATAACAGGGGATTAGGTTATCTCAGGGCTTCCTGAGTTGCT
GTCAAATGACCCGCAGGGGAGCTAGAGCTGTGCAGCTTGCCGCTTCACAA
CTCGATTTCTCTTCCGTCTTTTTATCCCGTTTCGCTTCACATGGTCGACG
GCGGGTGTCGTCCTCGACAAGATTACCTCCTGCGGGCGTTTCCTCAAGCA
CGGGGAATTCGAAGGGGAAATCCACAGACTTGGCAGGGTTGTTGCTCTTT
GGAGGGCTAGTCGTTGGAACTGGGTGCCTAGGCGTGTGGCAGTCGGAGAG
ATATTTTTGGAAAATTGACGCCATTCAAGAACGGAACGAGTGTCTTGCAA
AACAACCTGAGCCATTGCCAGATTTTCCCGAAGCCTACCGCCGTTACTTG
GTGAGTGGCACGTTTCTTCATGGCTTAGAGCTTTCTGTCGGGCCGCGGGC
GGCTCCCCCCTCCGTCCACGGACCCGCCCAGGGCCTTGGCACCAACCCCC
AAGGCTTCTACATCCTCACCCCTTTCCAACGCGCCGGAGACGGGTACGTG
CAGGCGCTGACTCGGGGGGATGTTGGTGGCCACCATCGGTCTTGTGGAGG
GAAGTTGCCCGAGGGCAGTTACCGGGGGGAGGAAGGGA
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protein sequence of rna10157

>rna10157-protein ID=rna10157-protein|Name=rna10157|organism=Nannochloropsis gaditana|type=polypeptide|length=154bp
MREGREGGREGGGEKGEGREGGREGGREGGREEGREGGGETAMTDYTGDQ
GSPPFSLSPLASPFPPHYLPYLLPDTPLEGEVGKEEGKEQGWERRREGWR
MADFLYGEPSAEGPSEEKGADTRKEESYNILGGEHGSQETDLVISLLSDQ
LFKE
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mRNA from alignment at KK037264.1:12704..14530-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10157 ID=rna10157|Name=rna10157|organism=Nannochloropsis gaditana|type=mRNA|length=1827bp|location=Sequence derived from alignment at KK037264.1:12704..14530- (Nannochloropsis gaditana)
AGACACGGACGAAGGAGCCAGGGGTGGGACTCAGTCAAGGGAGAGGAGGC
GAAAAAGGAGAAGGAAGGTAAGAAAGAATGCGAGAAGGAAGGGAAGGAGG
AAGGGAAGGAGGAGGAGAAAAAGGAGAAGGAAGGGAAGGAGGAAGAGAAG
GAGGGAGGGAAGGAGGAAGGGAAGAAGGGAGGGAAGGAGGAGGAGAGACC
GCGATGACCGACTACACCGGTGACCAAGGATCTCCCCCTTTTTCGCTATC
CCCCCTCGCATCTCCTTTCCCGCCTCATTATCTGCCATACCTGCTTCCGG
ATACCCCGCTGGAGGGGGAGGTAGGGAAGGAGGAAGGGAAAGAGCAAGGG
TGGGAGCGGAGGAGGGAGGGGTGGCGAATGGCGGACTTTCTGTACGGGGA
ACCGTCTGCCGAAGGACCTTCGGAGGAGAAAGGGGCAGATACGAGAAAAG
AAGAGTCATATAATATACTGGGCGGAGAGCACGGCAGTCAAGAAACAGAT
TTAGTGATATCGCTGCTCAGCGATCAGCTCTTCAAGGAGTAAAAAGGGGG
GGAGGAAGGGAGGTAGGTAGGTAGGTAGGTAGGTAGGTTGCCGAATTGAA
TGGGGAGGGGGAAGAGGGGCTTGGCAAATATGAAACGGAAAAACGAAGGC
CGCGTCGGTAGAGAAACGGGCAACGGCAAGCCAAGAAGAAAAGAAAGCAA
CGAATCAAAGACAAGTGGAGCACGGAAGGCAAGGGGCCACCAGAAAGCAG
GTGGGAAGCACAGAAATGCTCGCAGGCCACCGCAATACTAAGTCTTGGCC
TATCCTTAGTGCCGCATGATTTCATCTGCCCAAGACTAAAGCATAGGAGG
GGACTATCTCGGAGTTTGGATCTCGGCTCCCTCTCCGTCCTCACTGAAGG
AAAGGGGGCAAAAGCAGGGGCTTCTTGCTTGCCCACGGCACTGCCCTTTC
CTTCCCTCCCACGCTCGAACGAGGCCCTCTGCCAGCGTGCCGGTGGCTGG
AACACTTTCTTGGCATCCGAACGATGTGGAAGGCAACAAACCATTTTCAT
GCCAGACTCCGATTTCGTAGGGCTGTGCACGCATTTTCTTTCGTCAGCCG
CATAATTAGTGTACATGGTGCTTTATACGTGACGATTTTCGGCCGCAGCA
GGGTCGGCCTACATTTTGTTAGGATCTTCGAGTAATAGACAGCCCCAGAA
GAATGGAGGAGGCACACCTTCCCCCCAGAAAAAGAACTGGAAACGGAAGG
CTCCAGGCCACACGGAGGAAAGACAGGACAATGGAAATGACGGCGATTAG
TCCTGCCACTGGAAAATGGTGATGTATTTTGTCAGTCACAGTTTCCTTCC
TCAAATGGAGGGATAATGGGGGGGGCGTCAGAATACTCTCCGAGAGGAGA
TATGCTGTTCATAGGGCAAGCTACTGGCCCTTTCCTGTTGGAGGAGACCC
AAAATGATCAATTTTTTGAAGTTGTTTCGACAATGATACAGAATTCTTGC
CACGACCGAAGAGCGTGCACTGGTCGTCGGACTGTCAGCCAACTCCCGAT
CCGGAGCTCCCACGAACCACACGTCGGGAAGGAGACGATCAGCATGGCAG
AAGAGAGCGCATGCATGGTTGAAATTTGAACAATATCCTGCAATTTTGAG
GGGACTTGAAGCATCGTAAACAAGGAAGGAAGAGGGGTACGTATTACATG
CATAAATGGGCGCAAGTAGGTGTTACACGCACAAATTGAAGTCACGGGAA
CAGCAATGGAGACAAGTCGCCTTATGATCAAATGCCCCCCCCACCCAATC
GAAAGAAATAAAAGCGTGCGTGCCGTG
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Coding sequence (CDS) from alignment at KK037264.1:12704..14530-

>rna10157 ID=rna10157|Name=rna10157|organism=Nannochloropsis gaditana|type=CDS|length=465bp|location=Sequence derived from alignment at KK037264.1:12704..14530- (Nannochloropsis gaditana)
ATGCGAGAAGGAAGGGAAGGAGGAAGGGAAGGAGGAGGAGAAAAAGGAGA
AGGAAGGGAAGGAGGAAGAGAAGGAGGGAGGGAAGGAGGAAGGGAAGAAG
GGAGGGAAGGAGGAGGAGAGACCGCGATGACCGACTACACCGGTGACCAA
GGATCTCCCCCTTTTTCGCTATCCCCCCTCGCATCTCCTTTCCCGCCTCA
TTATCTGCCATACCTGCTTCCGGATACCCCGCTGGAGGGGGAGGTAGGGA
AGGAGGAAGGGAAAGAGCAAGGGTGGGAGCGGAGGAGGGAGGGGTGGCGA
ATGGCGGACTTTCTGTACGGGGAACCGTCTGCCGAAGGACCTTCGGAGGA
GAAAGGGGCAGATACGAGAAAAGAAGAGTCATATAATATACTGGGCGGAG
AGCACGGCAGTCAAGAAACAGATTTAGTGATATCGCTGCTCAGCGATCAG
CTCTTCAAGGAGTAA
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Synonyms
Publications