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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100807g3.7979.mrna |
| Orig protein id | gnl|cribi|Naga_100807g3.7979 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037264.1 | supercontig | KK037264.1:7584..10503 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna10155 ID=rna10155|Name=rna10155|organism=Nannochloropsis gaditana|type=mRNA|length=1067bp
AAAGGACTTTTTCTCAACCAAACCCGCATGCACACGCACAAGGAATCCTG
TTGAAATCATTCACGTGCGCCATTTTACTGGGTAAAGGTCTTCATTTCCA
CGTGCGGGATATGTGGGTGTCAAGCCATGTCAAGAATGAAGACGTTCGTG
TCTAGTTGAAAATGGGGAAGACGCACATACACTGACGCACAAATGCCATG
TTTCCTCTCTCCCGCGAATCCCGACGTTGAAAAATCCCAACACTGGCTGT
TCCTTCAACGAAGGGAGTGCAAGCTTCCGTGCTCCTCGAAGTGGCGGGGG
AACGGTTTGTCGCGTGTGTGCCACACGTGCAGTGGGATTGCCGGATATAC
TTGAAGAGGTATCTTGCCTTGATGTCGCATTTCCAAAAGTATTTGAGGTG
GAATGCGTGTCACGAAGCCCCCGGCGTCATGTTGAGCCTAGCGAGCCATC
GCTCTCACCTCTGCCGCGGGCCAGTGAGTCAGATGGCAATAGTGAAAGAT
AATTGGCACACGTACGGATCCGATACAGGCGTGCGTCACTGGAAAAGTTG
ACCATGACCTCCTCCAGGACCTTTACACCATTCGCCTTGAGGTTTTTGGA
TGAATCAATCCCGCGACTGATTACCCTTATTGTAATCGCACACTTTTTCG
ATGGAACGACCGTGACAAAGCACTTGACGTCATCGACGCATATCTTGACT
GGCAATGTGGCACACATTGTGCAGCGGGAATTTAGGCGTGTTAAGAGGCT
CGTTGAAGCGATGCCTGTGCCTATAAGGCTCAAGCCTCCAACTCATGCGC
AGGACACATCCCTGTCCGTTTGTATGATTTATCTCCCAAGAAAAGAATCG
AAAATGGCACTACCTCTTGGAGGAATCGATTTGAAGGCCGGGAAAGCGTA
AGCGGTTTGCAACGGGCACCGTGATACTCCCCCTTCCTCCACCGCGGTGG
CCGATGTCCGGAATATAAAAGCCCTCCCGGCCATGGTAAAGAAAATAAAC
CAAACAAGTCTCACACCATGCTTCTTATCGACCCCGATTGGCTCCATGTT
TCTTTTGCGTACTACGA back to topprotein sequence of rna10155 >rna10155-protein ID=rna10155-protein|Name=rna10155|organism=Nannochloropsis gaditana|type=polypeptide|length=183bp
MTYPSSTLPSPDLVPTMARPCLSPKQVDDVLAAFFVLVGVDPDDLPSSTT
PAHCSSPPSKPPRHLTSPTGPRTNISHRGHVKHQRQLLSSKKRLSAGHIV
PAGEMKRKLLSCSHPSKNGSKEPSMTKHKKHRDRLVQSAPFLGAGTSLWG
QQQQQRRMQQLGALSVRRCLFATDDDKENASSK back to topmRNA from alignment at KK037264.1:7584..10503+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna10155 ID=rna10155|Name=rna10155|organism=Nannochloropsis gaditana|type=mRNA|length=2920bp|location=Sequence derived from alignment at KK037264.1:7584..10503+ (Nannochloropsis gaditana)
CGTCTTCATTCTTGACATGGCTTGACACCCACATATCCCGCACGTGGAAA
TGAAGACCTTTACCCAGTAAAATGGCGCACGTGAATGATTTCAACAGGAT
TCCTTGTGCGTGTGCATGCGGGTTTGGTTGAGAAAAAGTCCTTTTGGTCT
GTAAGGGCGCTTGTTCGCTGTGATTAGCAGCTCACTTACAGGATTCTGAT
GTCGAACGTTGACCACGTCTTGACTGAACCATCTGCCCCTTACACGGCAC
TTCCGCGCATGAGTGTCCACATAACTCACAAACTTCTATTTTCAAATATG
CACCCCCCTGCAGCGTCCTTTCACTTCTGCGTCAGACGCGTAAAGCACGA
GGCGTTGACCGAGGGAGGCACGGTGTCGGCCTGCTCAGCATCATGACATA
TCCCTCTTcaacccttccttccccagaCCTGGTGCCCACCATGGCACGTC
CATGCTTGAGCCCCAAACAGGTCGACGACGTGCTTGCGGCATTTTTCGTT
TTGGTGGGCGTGGATCCCGACGATTTGCCGTCGTCGACCACACCTGCACA
CTGctcgtctcccccctccaaacCACCTCGGCACCTGACGTCTCCCACGG
GGCCCCGCACAAATATCAGCCATCGAGGCCATGTCAAACATCAGCGACAA
CTGTTGTCCTCGAAGAAACGCTTGTCGGCAGGACATATCGTGCCTGCAGG
GGAGATGAAAAGGTACGGTTTGGGGGCGTCTTGAAGGGACCTATCTTGTC
TGCGAACACGTACGCGTCAGACCACCTCAGTATAgacttctttttccctc
ccccactccctcctgccccgccccctggcCCTCAACCCGTCGCATGCATA
CCATGACGACCTGTGCTGAGTGTGGGAATGTGCTTCGCAAATCTGAAATG
AGTTTGAACGTCTCCATCGcctgatccctccctccttcccttcactcccc
attccccccctccctccacgtttcctttctcccccagGAAACTTCTTTCC
TGCTCTCATCCCAGCAAGAATGGAAGCAAAGAACCAAGCATGACTAAGCA
CAAGAAGCATCGCGACCGCCTCGTGCAATCAGCGCCTTTTCTCGGTGCCG
GGACCTCTCTGTGggggcagcaacaacaacaacgacGGATGCAGCAGCTC
GGAGCTCTCTCGGTTCGCCGTTGCCTGTTCGCGACGGACGACGACAAGGA
AAACGCGTCGTCTAAGTAGGAGAGAACACACCTGCTGGAGAGGgcggcaa
gaggaggagagggaggccacacagccaccgccgcctcggTCGTGGGAGTG
CCACGCGATTGCGTAATCGTACGTCTGGGGCCTGATTTTACATGGTGTAC
ATTCAATTTCGAATCCGGGTGGAAAAGCTCTACggacggtgggggagagg
tggcCCCCAGAGGAGATCCGGCCCCCGGGGGCAAAGTTTGTATTTAAAAT
TTTAAATAGTGTCCGTACTTTGACCTTTCCTCGATTGCACCGTCAAATGA
AGGGGCGAGAAGTCGGATGAGAAACCTGCTGCCGATCGGCAGCGGAGGAC
GTGACTCTGATCGCCGCGCCTGAATGGCAacgctggagggggagggagga
ggatgggcacGAGAAACACAGCaagtgagggggaagagaaagaggcaaga
AAGGCGGTGGGTGCGCTAGGAAAACGCCGCTTCTCCTCTGGGCACGCCTC
ACCCTGTGACGCCTGGGTTTGTTTTTGAGGGCATTTTTGAATTTGTTTTC
TCGATAGGAAGAAAACCACAGCACCCGTTTAATTGTTTACATGTGGACAG
GCGGGTGGGATGCTGTGATATTGAGCAGTTGTAGGGAAGCATATGAATAT
AGCAGCACCATAGCATACTGGTGCGGCCGGCAACAAGAGAAGACGGAGCG
ATGCGGTGGGCGGTTGTCGACGTCgaccccgccttgtccttccttccttc
ggcGACGGAGGTGCAGGACCTGTCCCTGACGGCAGAGGCTGTTTCTTCGG
GggaaatgggggaaaagTCGGGGAAGACAAGACGACATGGACGGGACGAG
CATAcgcagggaagagggaagaatcGGGCGGACCAGTGTGATTGACGGTC
AACAAGATGTTGCGTTCATGATGAACACTGATGTGCCCGCGCGTGAGGTT
TGAATCAATATGGTACGTCTGTCTCCTTACAGGCTACGAGCTGTCGAAGG
AGTTTCGCAGTTCTATTCGCGAAAGCTGatagagagaggaggggaggctg
aaCGACCTAGGAAGCCTGATAGACCCGTATGATTCTGTCATGTCCATTCA
AGCACCAAAAATTACCCTGTTATTTAACATTCAGTTTTAGCATTTGAATT
TGAAACTGCCATAGAAAGCAAGATAAGGCAGGGAATTGCACGATTCGCGT
GCGAGAAGAGATCGAAGAATAGCGTTTCTGGGGGCCCCAGACTTTTAAAT
TGTTGttaagaaggagaaaaaatgaTTTTACGCAAGCATGACATGCAACA
AGATGATGCTGTTCGTTTCTGAAATGGCTTTGTTTGGAAGTACTGCCCGC
ACGTCTCACGGGTACCGTGCAGATGAGATAGAAGGCAACGCTCAACGGCC
AGCCGTGTGATTCCTCCGCACGTCAAATTTGGCATTAGCTAGTTTATTCT
ATAAGCGCCGATGCAAATATATAGTACCCAGACATCCTTTGTAAGTACTT
TTTTCATAAGCCTGTCTCTGCTCCACCTTGGTACGCATCCTCTCCCTTat
tcccttttcctgcaTGCACAAAGCAGAAGGGTGTCGAAAGCTTATTGAAA
ACAAAGTAGATAAGTTAAGAGAAGGTATAGAGGAATTTGGACGCAGTTGG
CAGGGAACCGGTGCGAAGCCATGAGACTTCATGCATCAGAAAGCAGTCTC
CCCAACGGTGATCTCTTTCC back to topCoding sequence (CDS) from alignment at KK037264.1:7584..10503+ >rna10155 ID=rna10155|Name=rna10155|organism=Nannochloropsis gaditana|type=CDS|length=1104bp|location=Sequence derived from alignment at KK037264.1:7584..10503+ (Nannochloropsis gaditana)
ATGACATATCCCTCTTcaacccttccttccccagaCCTGGTGCCCACCAT
GGCACGTCCATGCTTGAGCCCCAAACAGGTCGACGACGTGCTTGCGGCAT
TTTTCGTTTTGGTGGGCGTGGATCCCGACGATTTGCCGTCGTCGACCACA
CCTGCACACTGctcgtctcccccctccaaacCACCTCGGCACCTGACGTC
TCCCACGGGGCCCCGCACAAATATCAGCCATCGAGGCCATGTCAAACATC
AGCGACAACTGTTGTCCTCGAAGAAACGCTTGTCGGCAGGACATATCGTG
CCTGCAGGGGAGATGAAAAGGAAACTTCTTTCCTGCTCTCATCCCAGCAA
GAATGGAAGCAAAGAACCAAGCATGACTAAGCACAAGAAGCATCGCGACC
GCCTCGTGCAATCAGCGCCTTTTCTCGGTGCCGGGACCTCTCTGTGgggg
cagcaacaacaacaacgacGGATGCAGCAGCTCGGAGCTCTCTCGGTTCG
CCGTTGCCTGTTCGCGACGGACGACGACAAGGAAAACGCGTCGTCTAAGT
AGATGACATATCCCTCTTcaacccttccttccccagaCCTGGTGCCCACC
ATGGCACGTCCATGCTTGAGCCCCAAACAGGTCGACGACGTGCTTGCGGC
ATTTTTCGTTTTGGTGGGCGTGGATCCCGACGATTTGCCGTCGTCGACCA
CACCTGCACACTGctcgtctcccccctccaaacCACCTCGGCACCTGACG
TCTCCCACGGGGCCCCGCACAAATATCAGCCATCGAGGCCATGTCAAACA
TCAGCGACAACTGTTGTCCTCGAAGAAACGCTTGTCGGCAGGACATATCG
TGCCTGCAGGGGAGATGAAAAGGAAACTTCTTTCCTGCTCTCATCCCAGC
AAGAATGGAAGCAAAGAACCAAGCATGACTAAGCACAAGAAGCATCGCGA
CCGCCTCGTGCAATCAGCGCCTTTTCTCGGTGCCGGGACCTCTCTGTGgg
ggcagcaacaacaacaacgacGGATGCAGCAGCTCGGAGCTCTCTCGGTT
CGCCGTTGCCTGTTCGCGACGGACGACGACAAGGAAAACGCGTCGTCTAA
GTAG back to top
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