rna10124, rna10124 (mRNA) Nannochloropsis gaditana

Overview
Namerna10124
Unique Namerna10124
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length299
Alignment locationKK037263.1:970..1297 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101989g2.5698.mrna
Orig protein idgnl|cribi|Naga_101989g2.5698
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037263.1supercontigKK037263.1:970..1297 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101989g2gene9827Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20581.1cds10093Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10124rna10124-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10124 ID=rna10124|Name=rna10124|organism=Nannochloropsis gaditana|type=mRNA|length=299bp
TCCCACAGAGGAAACCCTCCGCCGAGTCGACCAAAGAACGGCTCAAGCAG
AAAATGGAAGAGAAGAAACAACAGCAACAGCAGCAAGCGTCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCAGGAGAAGACGGAGGACAGGACAGACAAGG
TGGCGGAGGCAGAACGGATCGCAGCGGAGTTGTTAGCAGAAGAGGGCGGA
GGTAGCGGGAAAGGGAAAGGAGGGAAGGAGGGAGGGAAGGAGGGCGGGCT
GGCGAACAGCGGGGCCGGGAAAGGGAAGAAGAAGACGCCAAAGGCATAG
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protein sequence of rna10124

>rna10124-protein ID=rna10124-protein|Name=rna10124|organism=Nannochloropsis gaditana|type=polypeptide|length=69bp
MSMRMCPEVPPARILEQFGTKIGGNIHTYIYIYIYGICNVCPVRVMVSQT
TPYHCPLHWLVHATTRGTN
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mRNA from alignment at KK037263.1:970..1297-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10124 ID=rna10124|Name=rna10124|organism=Nannochloropsis gaditana|type=mRNA|length=328bp|location=Sequence derived from alignment at KK037263.1:970..1297- (Nannochloropsis gaditana)
GGGGGGGATGGCACATCCGAATGTCGATGAGAATGTGCCCCGAGGTGCCC
CCAGCGCGTATTTTGGAACAGTTTGGGACCAAGATTGGTGGGAATATACA
TACATATATATATATATATATATATGGTATATGCAACGTGTGTCCCGTCC
GGGTTATGGTGAGTCAAACCACCCCTTATCATTGCCCGCTTCATTGGCTT
GTGCACGCCACGACAAGAGGCACGAATTAAAAATATTCGCTTCAACGCTT
CGCCCTCCAAAGGATCCTCGACTCTCGTTTAGACGTCTCATGGCTTTTCT
TTTGTCGGCATTGCCACCTTTCTCCTCC
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Coding sequence (CDS) from alignment at KK037263.1:970..1297-

>rna10124 ID=rna10124|Name=rna10124|organism=Nannochloropsis gaditana|type=CDS|length=210bp|location=Sequence derived from alignment at KK037263.1:970..1297- (Nannochloropsis gaditana)
ATGTCGATGAGAATGTGCCCCGAGGTGCCCCCAGCGCGTATTTTGGAACA
GTTTGGGACCAAGATTGGTGGGAATATACATACATATATATATATATATA
TATATGGTATATGCAACGTGTGTCCCGTCCGGGTTATGGTGAGTCAAACC
ACCCCTTATCATTGCCCGCTTCATTGGCTTGTGCACGCCACGACAAGAGG
CACGAATTAA
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Synonyms
Publications