rna10120, rna10120 (mRNA) Nannochloropsis gaditana

Overview
Namerna10120
Unique Namerna10120
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length282
Alignment locationKK037262.1:89111..89631 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101893g2.7481.mrna
Orig protein idgnl|cribi|Naga_101893g2.7481
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037262.1supercontigKK037262.1:89111..89631 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101893g2gene9823Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20584.1cds10089Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10120rna10120-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10120 ID=rna10120|Name=rna10120|organism=Nannochloropsis gaditana|type=mRNA|length=282bp
ATGTGCCTGCCCGCCCAATTCCTCACAGGCGTCTTCGGCATGAACTTCGA
GCACTTTCCCCTCCTCAAGTCCCCCGACGGCTTCCTCATCTTCTGGCTTA
TGACGGGGAGTAAACGAGCTTGGTGGTGGGTGCATGATAGTATGTACAGA
TCTAGCACGTGCGAGTGCCCTTGGGGTTGTGCAGAAAGGAGGAGGGTTCG
GGTTAGGGCTACGTTCCGGGCAGCCAGAAGGTCCTGCTTGACCCCTCGTT
CAATGGATAAACGATGGAAGGGGATTAACTGA
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protein sequence of rna10120

>rna10120-protein ID=rna10120-protein|Name=rna10120|organism=Nannochloropsis gaditana|type=polypeptide|length=106bp
MWLVAACASREGRTRWRLFPVGWGVPHSTAGPLRNSMEQLAAPPHKNSTS
LAVTLVCTTSISLRDWHAMAMHSHHTWSKSVYGQDGCGFSRRGRRLSSVT
PDRQLP
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mRNA from alignment at KK037262.1:89111..89631-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10120 ID=rna10120|Name=rna10120|organism=Nannochloropsis gaditana|type=mRNA|length=521bp|location=Sequence derived from alignment at KK037262.1:89111..89631- (Nannochloropsis gaditana)
GAGGGGAAGAAGAACAAGAAGTGTGCGTAAAATACACGTCACAAATTTGT
AACATACATACAATAGCAACGCTTCAACTCTCTTTCAAGAGCCATGTGGC
TCGTCGCCGCGTGCGCATCTCGTGAAGGGCGGACACGATGGAGGCTTTTT
CCTGTTGGGTGGGGAGTACCACATAGCACAGCCGGGCCCTTGAGGAACAG
CATGGAGCAACTTGCTGCACCCCCCCACAAAAACAGCACAAGCCTTGCCG
TGACATTAGTGTGTACCACCTCAATCTCACTGAGAGACTGGCACGCGATG
GCAATGCATTCACACCACACGTGGTCAAAGAGCGTCTACGGCCAGGACGG
ATGCGGTTTCTCGAGGCGAGGCAGGAGGCTTTCCTCCGTGACCCCGGACC
GTCAACTTCCTTGAGGCGCCCCGTCACGCCCACCCTGAAAACTTTGGTCA
CAATGTGGACTGTGGACTTCCATGTGGACAGTAAGCTGAACGGGAACAAA
GAAGAAAGGAACGGGCATGGA
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Coding sequence (CDS) from alignment at KK037262.1:89111..89631-

>rna10120 ID=rna10120|Name=rna10120|organism=Nannochloropsis gaditana|type=CDS|length=321bp|location=Sequence derived from alignment at KK037262.1:89111..89631- (Nannochloropsis gaditana)
ATGTGGCTCGTCGCCGCGTGCGCATCTCGTGAAGGGCGGACACGATGGAG
GCTTTTTCCTGTTGGGTGGGGAGTACCACATAGCACAGCCGGGCCCTTGA
GGAACAGCATGGAGCAACTTGCTGCACCCCCCCACAAAAACAGCACAAGC
CTTGCCGTGACATTAGTGTGTACCACCTCAATCTCACTGAGAGACTGGCA
CGCGATGGCAATGCATTCACACCACACGTGGTCAAAGAGCGTCTACGGCC
AGGACGGATGCGGTTTCTCGAGGCGAGGCAGGAGGCTTTCCTCCGTGACC
CCGGACCGTCAACTTCCTTGA
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Synonyms
Publications