rna10108, rna10108 (mRNA) Nannochloropsis gaditana

Overview
Namerna10108
Unique Namerna10108
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length444
Alignment locationKK037262.1:65872..66192 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100736g3.10602.mrna
Orig protein idgnl|cribi|Naga_100736g3.10602
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037262.1supercontigKK037262.1:65872..66192 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100736g3gene9811Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20595.1cds10077Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10108rna10108-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10108 ID=rna10108|Name=rna10108|organism=Nannochloropsis gaditana|type=mRNA|length=444bp
ATGGGGATATGGGCCATGGTCGAGACGCCGGCGGCCGTCATGAACATCAA
GGAGATCGCCCGCTCCGCCAACTTCGTGCCCCGCCTGGAGGCCCTGATGA
TGGGCACGTCCGACTTGACCAACGAGCTCCACGCCCTCCACCACCCGGAC
CGCGTCCCCCTCCTCTACTCCCTCTCCTCCTGCCTCGTCGCCGCCCGGGC
CTTCAAGCTCCGCGTCATCGACGGCGTGCATTTGAATTTGAACGACCCCA
ACGGCTTCGCCGCCGCCTGCGCCCAAGGCCGGGCCCTCGGCTTCGACGGG
AAGTCCTTGATCCACCCCAAGACCGTCGCGGAGGCCAACAAAGCCTTCGG
GCCCCGACCGGACGAATTGGCGCACGCCGAAAGGGTCCTGACGGCCTGGC
GGGAGGCCCAGGCGCATGGGGAAGCGATTCCATGCCTGGGCTGA
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protein sequence of rna10108

>rna10108-protein ID=rna10108-protein|Name=rna10108|organism=Nannochloropsis gaditana|type=polypeptide|length=77bp
MAPGRAGRGPWLVLGLVSTLAVTAIGYVHYDQQKQRTDMRRLIVEEKERE
REEQARAGSQRARAGAPGAKGGPGRSL
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mRNA from alignment at KK037262.1:65872..66192-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10108 ID=rna10108|Name=rna10108|organism=Nannochloropsis gaditana|type=mRNA|length=321bp|location=Sequence derived from alignment at KK037262.1:65872..66192- (Nannochloropsis gaditana)
CAAATTGTCCAACCCTTTGCCCGCCTTTGCAACCAACGGACAGGCGTGCA
TGCGTGCGTGAGACCCGGGGTCGGAAAGGGAGGGGTCATGGCTCCCGGAA
GGGCCGGCCGAGGGCCCTGGCTGGTGTTGGGATTGGTCTCCACCCTGGCC
GTCACAGCCATCGGCTACGTACACTACGACCAACAAAAGCAACGCACGGA
CATGCGTCGGCTGATTGTCGAGGAGAAAGAGAGGGAACGGGAGGAGCAGG
CGCGGGCGGGGAGCCAGAGGGCGAGGGCGGGGGCTCCGGGCGCCAAGGGC
GGGCCAGGGCGCTCTTTATGA
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Coding sequence (CDS) from alignment at KK037262.1:65872..66192-

>rna10108 ID=rna10108|Name=rna10108|organism=Nannochloropsis gaditana|type=CDS|length=234bp|location=Sequence derived from alignment at KK037262.1:65872..66192- (Nannochloropsis gaditana)
ATGGCTCCCGGAAGGGCCGGCCGAGGGCCCTGGCTGGTGTTGGGATTGGT
CTCCACCCTGGCCGTCACAGCCATCGGCTACGTACACTACGACCAACAAA
AGCAACGCACGGACATGCGTCGGCTGATTGTCGAGGAGAAAGAGAGGGAA
CGGGAGGAGCAGGCGCGGGCGGGGAGCCAGAGGGCGAGGGCGGGGGCTCC
GGGCGCCAAGGGCGGGCCAGGGCGCTCTTTATGA
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Synonyms
Publications