rna10105, rna10105 (mRNA) Nannochloropsis gaditana

Overview
Namerna10105
Unique Namerna10105
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length458
Alignment locationKK037262.1:54897..55914 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101507g1.10178.mrna
Orig protein idgnl|cribi|Naga_101507g1.10178
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037262.1supercontigKK037262.1:54897..55914 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101507g1gene9808Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20599.1cds10074Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10105rna10105-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10105 ID=rna10105|Name=rna10105|organism=Nannochloropsis gaditana|type=mRNA|length=458bp
CCAGGCGAGCGTCCGCAGCCAAGGGTTGACCGCCCTCCCAATTTACCGAC
TTTCCCCCCATAAAATTGGGTGCTCCTTGGCGGAGGCGGCGGAGCGCGCC
GCCTACCGTGTCTGGTTGGAGCAGGCAGCGACCTCCCTCCCTCCCGCCCT
CCACGTCGTCTACATCAACACCTCGTTGGGCACCAAAGCTTTGGCCCAGG
ATATTTTGCCCACCATCACCTGCACCTCCTCCAACGTCCTCCGCACGCTT
TTGCATGCCTACGCGCAAATTCCCGATTTGCATGTGTACTACGGCCCCGA
TACCTACATGGGCGCGAACCTCCACGCCCTCCTCTCCCGCCTCGCCGCCC
TCCCGCCCTCCCTCCCCACCTCCCTCGCCACCGTCCAAGCCTTGCACCCG
GCCCATTCCCCCGCCAGCATCGCCGACCTCCTGCCTCGCTTCCATTATTT
CAAGGTGA
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protein sequence of rna10105

>rna10105-protein ID=rna10105-protein|Name=rna10105|organism=Nannochloropsis gaditana|type=polypeptide|length=126bp
MLEVVGCVLIRVADGKARCFEARAPPRRPAHVYTCISLPCRVPCEHGWDS
CITCASRSIEIFDEAMHGRLAALACTYIAFYHRAALACTYIAFYHRYRIN
TQERYDFLPPHPLPCAKRLPRYHPAP
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mRNA from alignment at KK037262.1:54897..55914-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10105 ID=rna10105|Name=rna10105|organism=Nannochloropsis gaditana|type=mRNA|length=1018bp|location=Sequence derived from alignment at KK037262.1:54897..55914- (Nannochloropsis gaditana)
TGCGGGGGTTGAGACGTGGCGGTGCGACAGACACCGTGCGTTCAGGCTGA
CGCCGTCCTCTGGGGTGACGCGCAGGTGTGTGAAAGTATGGCAACGTGTC
GCAGTAGCGTGTGGGCGAGGGAAGGGAGGGAAGTCGTGTGTGCACCGGGA
AGGGTCATTTAAGTGCAAGCAGATCCCTCCCTCCGAGAGGGGGAGAGGTT
TGAAGAAAGGAAGGGGGGGGAACGAGCTCGATTCATTTATATTGGAAGGC
ATGCACAGAGCCTTCAAAGGGGCGAACACGATTGAATTGTCGATGTGTGG
GCATTAGAGGAGGGTGATGTTGGAGGTTGTGGGGTGTGTTTTGATACGCG
TGGCAGATGGGAAGGCTCGTTGCTTCGAAGCCCGTGCACCTCCCCGTCGG
CCGGCACATGTATATACATGTATATCCCTTCCGTGCCGCGTGCCGTGTGA
ACATGGGTGGGACTCGTGCATAACATGCGCGTCACGGTCCATTGAAATCT
TTGACGAAGCCATGCATGGCCGTCTGGCGGCTTTGGCATGTACATATATA
GCATTTTATCACCGAGCGGCTTTGGCATGTACATATATAGCATTTTATCA
CCGCTATCGAATCAATACCCAGGAGCGTTACGATTTCCTCCCCCCCCACC
CCCTCCCGTGCGCAAAACGACTTCCGCGTTACCATCCAGCACCGTGAGTG
TGTTTTATGTCCTGGTCGGTCCCCATCGGGCATGGTGTTCTTATAAATTC
TCGTCATGAAAGAAGGAGTAGGTGGGAGGGCACCGCAGAGGGTCTGATAT
ATAATATATATATATATATACATCCCAAAACTTTCCTCCCGAGCACCGAC
CACGTCGAAAGAAAGTAACAAGCCTAATGTCGAAAGAAAATGTGGTGGCG
GTGGGAACGAGAGGGGTGGTGGAGGCGACGTGTCAGTGCCAAGCGGGGTG
ACAAAGGGCCTTCAAGGCGGGGGGAGAGCCTCCCTACCGCAAAAAAGAAA
TTTGACACCCCACGATGA
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Coding sequence (CDS) from alignment at KK037262.1:54897..55914-

>rna10105 ID=rna10105|Name=rna10105|organism=Nannochloropsis gaditana|type=CDS|length=381bp|location=Sequence derived from alignment at KK037262.1:54897..55914- (Nannochloropsis gaditana)
ATGTTGGAGGTTGTGGGGTGTGTTTTGATACGCGTGGCAGATGGGAAGGC
TCGTTGCTTCGAAGCCCGTGCACCTCCCCGTCGGCCGGCACATGTATATA
CATGTATATCCCTTCCGTGCCGCGTGCCGTGTGAACATGGGTGGGACTCG
TGCATAACATGCGCGTCACGGTCCATTGAAATCTTTGACGAAGCCATGCA
TGGCCGTCTGGCGGCTTTGGCATGTACATATATAGCATTTTATCACCGAG
CGGCTTTGGCATGTACATATATAGCATTTTATCACCGCTATCGAATCAAT
ACCCAGGAGCGTTACGATTTCCTCCCCCCCCACCCCCTCCCGTGCGCAAA
ACGACTTCCGCGTTACCATCCAGCACCGTGA
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Synonyms
Publications