rna10104, rna10104 (mRNA) Nannochloropsis gaditana

Overview
Namerna10104
Unique Namerna10104
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length818
Alignment locationKK037262.1:54192..54649 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_103535g1.2207.mrna
Orig protein idgnl|cribi|Naga_103535g1.2207
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037262.1supercontigKK037262.1:54192..54649 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_103535g1gene9807Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10104rna10104-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20600.1cds10073Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10104 ID=rna10104|Name=rna10104|organism=Nannochloropsis gaditana|type=mRNA|length=818bp
ACGACACCCCCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCCCCCAGGTCCTACCAAGACCGACTCGACACCTTAAGCGCCGTCC
GCGACGCGGGCCTGCACGTCTGCTCGGGCGGGATTTTGGGTCTGGGGGAG
GCAGCGGCGGATCGGATCGGGCTCCTCCACACCCTCGCCACCCTGCCCCA
GCACCCCGAGTCGGTGCCCATCAACGCCCTGGTGGCGGTGGAGGGAACGC
GCCTGGAATCGAACCGTAGCCCGTCGGTCTTTGATATGGGCCGGATGATT
GCCACGGCCCGGGTGGTGATGCCTAGGACGATGGTGCGGCTTTCGGCGGG
CCGCTTGTCCTTCTCTGCGGGGGAGCAGGCCTTGTTGTTCTTCGCGGGCG
CCAATTCGATTTTCAACGGGGATGTGCTCCTGACCACGCCGAATCCCGCC
TTTACCGCCGATGCCGCTTTGTTCGATACCCTGGGCTTGGTGGGGAAGAA
AGCGCACGTGCCGGCCAAGGAGACGCCCTACCCCGTGGAGAGGGAGGGAG
GGAGGGAGGGCGGGAGGGAGGAAGGGGTGGTGGTGACGAGGAGTGCGAGG
CAGGCGGCCTAAGGGTGGGGTCCTGTGTGGTTGTCAGAGTCTTGGGTGTG
TGGATGTGCGTCGATGGGGTGGGACGGAGGAGGGGGGGCAGGAGGGAGGA
AAGGAGGAAGGGAGGGAGGGCGATTCAGGGGTGGTGTGGTAGGACCTGGC
GCATGGGGGAGGGGAACGGAGCACGAGCAAGAAGAAAACACGGACAGAGG
GAGCGAGCCCGCCTCCCC
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protein sequence of rna10104

>rna10104-protein ID=rna10104-protein|Name=rna10104|organism=Nannochloropsis gaditana|type=polypeptide|length=67bp
MPTRKFPICMCTTAPIPTWARTSTPSSPASPPSRPPSPPPSPPSKPCTRP
IPPPASPTSCLASIISR
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mRNA from alignment at KK037262.1:54192..54649+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10104 ID=rna10104|Name=rna10104|organism=Nannochloropsis gaditana|type=mRNA|length=458bp|location=Sequence derived from alignment at KK037262.1:54192..54649+ (Nannochloropsis gaditana)
CCAGGCGAGCGTCCGCAGCCAAGGGTTGACCGCCCTCCCAATTTACCGAC
TTTCCCCCCATAAAATTGGGTGCTccttggcggaggcggcggagcgcGCC
GCCTACCGTGTCTGGTTGGAGCAGGCagcgacctccctccctcccgccct
ccacgtcgtcTACATCAACACCTCGTTGGGCACCAAAGCTTTGGCCCAGG
ATATTTTGCCCACCATCacctgcacctcctccaacgtcCTCCGCACGCTT
TTGCATGCCTACGCGCAAATTCCCGATTTGCATGTGTACTACGGCCCCGA
TACCTACATGGGCGCGaacctccacgccctcctctcccgcctcgccgccc
tcccgccctccctccccacctccctcgccaccgTCCAAGCCTTGCACCCG
GCCCATTCCCCCGCCAGCATCGccgacctcctgcctcgcttCCATTATTT
CAAGGTGA
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Coding sequence (CDS) from alignment at KK037262.1:54192..54649+

>rna10104 ID=rna10104|Name=rna10104|organism=Nannochloropsis gaditana|type=CDS|length=204bp|location=Sequence derived from alignment at KK037262.1:54192..54649+ (Nannochloropsis gaditana)
ATGCCTACGCGCAAATTCCCGATTTGCATGTGTACTACGGCCCCGATACC
TACATGGGCGCGaacctccacgccctcctctcccgcctcgccgccctccc
gccctccctccccacctccctcgccaccgTCCAAGCCTTGCACCCGGCCC
ATTCCCCCGCCAGCATCGccgacctcctgcctcgcttCCATTATTTCAAG
GTGA
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Synonyms
Publications