rna10097, rna10097 (mRNA) Nannochloropsis gaditana

Overview
Namerna10097
Unique Namerna10097
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length804
Alignment locationKK037262.1:40031..41317 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100950g1.3815.mrna
Orig protein idgnl|cribi|Naga_100950g1.3815
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037262.1supercontigKK037262.1:40031..41317 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100950g1gene9800Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20606.1cds10066Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10097rna10097-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10097 ID=rna10097|Name=rna10097|organism=Nannochloropsis gaditana|type=mRNA|length=804bp
AGGCCAAGAGATGGAGTCGGGCTTTGTTGGCCAGGAAAGTGCCGGAATGC
ACCCTTGTGAATCTTTATTTCCAAATGCAGTTGTCGGCCTCCTTTTCAGA
ATAACTCGATTTTTTGAGTCATTCACACGATATCCTTTATCTTTGATATG
CATGTATATATTCTCTTCCCCTTGTGATTGTGCGTCCTCCCCCTTCTTCC
CATGTTTCTTTTGCCCCTGCCAGCGCATCAAGAGGAGGGAGGGGAGGGAG
GGGGGAAGGAAGGGGGGGAGGAAGGGCCTCGTAAGATGCTGGAATACGAT
GAGAAGCTCAAGGATCTGCCGCGGGTTTTCCGTTCCACGTCAGCCGCGAA
AAAGGCACCTGCCCCCTCTGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
AATAGAGAGGGGAGGGGGGGAGGGGAGGCCGGGGATTGAGGAGGGAAAGG
GAAATGGTTTTTTGATGAGTGTGGATGGAGCGAGGGCTTTTGGGGTGTGG
AGAGGGAAAACATTGACTGCTCCTTGCGCATTCGAAATCCATATTCATAC
TTGTTATCGATTTAATTTCAAAAAGGGGGAAAAGATGGTTTGTGCATATG
AGTAGCCCTTCTCGATGACAAGACAGAGAAGAGTCCTGATGTGGAATCGG
ATCAAGACGACATGCGTCCTGAGCTGGAACAGCTTGGACGACGCTGGTAG
GGAAATAACGTTATTTTAAGAGAGGCACTGAGTGAAAGAATGTGGGCTCC
CCTTGCCCCCCCCCTTGGCTTCTAACCTGTTGTGTCGTCTGTCATTTGTT
TTCC
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protein sequence of rna10097

>rna10097-protein ID=rna10097-protein|Name=rna10097|organism=Nannochloropsis gaditana|type=polypeptide|length=100bp
METPSNLTICDDEYSCITIQCLVFLSLGYRFIFGGLSRLNGTSLSKSSLL
ARGGGTFRSSPSSRPFSGTLAMPLRIACNHAPRVSICWRIFVIDEETGLV
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mRNA from alignment at KK037262.1:40031..41317-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10097 ID=rna10097|Name=rna10097|organism=Nannochloropsis gaditana|type=mRNA|length=1287bp|location=Sequence derived from alignment at KK037262.1:40031..41317- (Nannochloropsis gaditana)
TTGTCTAGGAAAAATAAAGATACCCCGTGCATTCCAGCTCCATTTCTGTC
CATCATAGCAATTACAAGGATTATCATGTGCTTTGGCTCGCAGGGCCCGC
AAGTCTCGCCTTTGAGTTCCTGTAGAAGCCGAGCTGATTTAGCATGGTTT
AACCTCCCCCCTTCGGAATTTTCTTTTCTCATTTCAGAAGTGCAACATGC
CGTTTCTCACAGAACAAAATGCGGCCCTCTCTTTTCGTGATGAGTTTTCG
GGCTTTTCGTCCGTCCAAAAAAGCCTTTTGGCTTGAATGGACATCGTATA
TTTGGTGTTTGGATCTTTTGGAAGATTCGGACAAGATGTCAGTCATAGTT
ATCAGAAGGCAGCGCTCGCCGTTCCATCCATATCCCAGGTTTCTTCTCCC
TAAATCCACAAGCAGTACACTCTGACAACACCAGGCGGATGGGGTACAGT
CTATCCCAATTCTAAAAATATAATTGGCTTGTGTAGTGCCGGGAGATCCC
CTTCAATGCTCCATCATCCCGCCGTCATGGCGCACCTTCTCAACCGGCAA
TCGCCCTCCCCTGACAGCAAATGGAAACTCCGTCTAACTTGACCATCTGT
GATGACGAATACTCATGCATCACAATCCAGTGCCTTGTTTTCTTGTCCTT
GGGATACAGATTTATTTTTGGGGGTTTGTCGAGGTTAAACGGGACCTCTC
TTTCCAAGAGCTCTCTCCTAGCTCGAGGAGGCGGGACTTTCCGTTCCTCC
CCATCCTCACGCCCATTTTCGGGCACGCTTGCGATGCCCCTGCGCATTGC
ATGCAACCATGCGCCCCGTGTTTCGATATGCTGGCGTATCTTTGTAATAG
ACGAGGAGACCGGACTTGTCTGACGAACCACCTACCTCCGGACTCTTGAC
TATCGCTCGACGCTCGATCTTGTGCTCCACCCCCAAACTTTTCTCTCGGT
TATGCCTTGGCCTTCATTCGGGGATTTTCGGGGGTTTGGACACCAGGATT
TCTCCCAACAGTACCCACACCCGCGTTGATTTCCTCCCCGCCACCCTGAT
CCCTCTCTCCGTCCCTCCCTCCCTCTCTCCCTCCTTCCCTCCTTCCCTCC
TTCCCTCAAAGGGAGTGTACGCGTGGCTTTGCTGGTTTTGGCACCATGAG
CGACATCCCGTACGAGAACCAATTCCAACACATCGAGGGTGGCGAGTACG
AGATCCGTGAGTCACTGTTTCTCGGGGCGGCAGGGGCCACGACGACGGGT
GCTTCTGGTTTGCTTCCTCTGTCCCTCCCTCCCTCCC
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Coding sequence (CDS) from alignment at KK037262.1:40031..41317-

>rna10097 ID=rna10097|Name=rna10097|organism=Nannochloropsis gaditana|type=CDS|length=303bp|location=Sequence derived from alignment at KK037262.1:40031..41317- (Nannochloropsis gaditana)
ATGGAAACTCCGTCTAACTTGACCATCTGTGATGACGAATACTCATGCAT
CACAATCCAGTGCCTTGTTTTCTTGTCCTTGGGATACAGATTTATTTTTG
GGGGTTTGTCGAGGTTAAACGGGACCTCTCTTTCCAAGAGCTCTCTCCTA
GCTCGAGGAGGCGGGACTTTCCGTTCCTCCCCATCCTCACGCCCATTTTC
GGGCACGCTTGCGATGCCCCTGCGCATTGCATGCAACCATGCGCCCCGTG
TTTCGATATGCTGGCGTATCTTTGTAATAGACGAGGAGACCGGACTTGTC
TGA
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Synonyms
Publications