rna10079, rna10079 (mRNA) Nannochloropsis gaditana

Overview
Namerna10079
Unique Namerna10079
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length315
Alignment locationKK037261.1:90187..90492 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100692g4.781.mrna
Orig protein idgnl|cribi|Naga_100692g4.781
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037261.1supercontigKK037261.1:90187..90492 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100692g4gene9781Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10079rna10079-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20626.1cds10048Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10079 ID=rna10079|Name=rna10079|organism=Nannochloropsis gaditana|type=mRNA|length=315bp
ATGGTTGAGCCCGAACACACAATACGTGTTGAAAGTAAGCCAATTCTACT
CAGCCCCATCACCTCGTCATACAAACAGGAGTCTGAAACTGATGTAGAAA
GATCTTGGAAGGGGGAACTACTACACTGTCACTGCTTTGGCCTGCGCCGA
CGCTTTCATTCAGGCTGCCGTTTCTGCGACTTGACCGTTGCAGTCGGAAA
CTTGTCGAAACGCCGAGAGACCCATGCCAGCACCCTCTTGCTCATTTTTC
CATATCAGAAAAAAGTGCTTCACATCGAGACCCTTTTTTCCTTCAAAGCG
ATTAAGTTTTTCTAA
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protein sequence of rna10079

>rna10079-protein ID=rna10079-protein|Name=rna10079|organism=Nannochloropsis gaditana|type=polypeptide|length=101bp
MMALSSPLTRCRRRSLCRGTGPPGCLPRPAPPSMKTLSLPRPHCEIIASS
TLCMLREVSLPKMTCWCRCGGGEVGGWVSKGLLNVVGGRDVGGTLLWVGR
A
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mRNA from alignment at KK037261.1:90187..90492+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10079 ID=rna10079|Name=rna10079|organism=Nannochloropsis gaditana|type=mRNA|length=306bp|location=Sequence derived from alignment at KK037261.1:90187..90492+ (Nannochloropsis gaditana)
ATGATGGCACTGTCAAGTCCTCTGACTCGATGCCGTAGGAGGTCGCTATG
CCGGGGTACTGGGCCACCTGGATGCTTGCCTAGGCCGGCGCCCCCGTCGA
TGAAGACGCTGTCCTTGCCCAGGCCGCACTGCGAGATCATCGCATCCTCC
ACTCTCTGCATGCTACGTGAGGTCAGCTTGCCGAAGATGACCTGTTGGTG
TCgttgcggggggggggaggtggggggatgGGTGAGCAAGGGGCTACTTA
ATGTTGTAGGCGGTCGAGACGTAGGGGGCACACTCCTGTGGGTTGGGCGT
GCATGA
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Coding sequence (CDS) from alignment at KK037261.1:90187..90492+

>rna10079 ID=rna10079|Name=rna10079|organism=Nannochloropsis gaditana|type=CDS|length=306bp|location=Sequence derived from alignment at KK037261.1:90187..90492+ (Nannochloropsis gaditana)
ATGATGGCACTGTCAAGTCCTCTGACTCGATGCCGTAGGAGGTCGCTATG
CCGGGGTACTGGGCCACCTGGATGCTTGCCTAGGCCGGCGCCCCCGTCGA
TGAAGACGCTGTCCTTGCCCAGGCCGCACTGCGAGATCATCGCATCCTCC
ACTCTCTGCATGCTACGTGAGGTCAGCTTGCCGAAGATGACCTGTTGGTG
TCgttgcggggggggggaggtggggggatgGGTGAGCAAGGGGCTACTTA
ATGTTGTAGGCGGTCGAGACGTAGGGGGCACACTCCTGTGGGTTGGGCGT
GCATGA
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Synonyms
Publications