rna10078, rna10078 (mRNA) Nannochloropsis gaditana

Overview
Namerna10078
Unique Namerna10078
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1059
Alignment locationKK037261.1:89782..90096 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100692g3.782.mrna
Orig protein idgnl|cribi|Naga_100692g3.782
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037261.1supercontigKK037261.1:89782..90096 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100692g3gene9780Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20627.1cds10047Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10078rna10078-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10078 ID=rna10078|Name=rna10078|organism=Nannochloropsis gaditana|type=mRNA|length=1059bp
ATGGAAGTGGCGTTCCAATATTTAAAGCCAAGGGCAACATTTGGGCAAGA
TGTTCGCCAAGCCCTGCAAGACACTTCAGCAAAAGTGCTCCTCGCATTGC
CCTCTGTCCCGCCTTCTCCAACTTTTTCGTCGAAATTTATTCGTAAAAAT
CCTTGTAGTGTTGGTGTGAGCACGTGTCGGGAGATAGCAGCTCATGTTGT
CAATACGGAGACATGTGTTTTGAAAAATGCAAGTATGAGGCACGTAGAGG
GCGGTTGGCCAAAAGACGTTGATCACACCGAACAAGCCGACGTGGCGCGC
TTCCGAAAGAAAGCGGAAAAAGATGATGAATGTAAGGTAGCATTGAAATT
GCTGGGTCCAGTGGTGGCGAGATGCATGAAACAGAATGCCACGATAGATA
TTTATCAGGAATACTTCGTGGGGGAATGCAGGGAAAAAGAGTCTGGGCGA
GACCGGGAGGGAGTCGGAGCCGACTATGTTGATCAAGGATCCTCTTCAGT
AGGTGGCGGAGAAATTTCGGGACCGTCGGGAGTATTTCTGAAAGGCGGGG
GTGGCACCAACACCACTGTGGGTGGTGCCTATCTCCACGGCAATCCCTCC
CGATATTACCAGGAGCATGCCTCCGAGTCTTTCACAGGTAAAGGGCTGGC
CGTCTTCCGCGATCCATCTTCTTTGAAACGGCCAATTGCTTCACTCAATT
GGCATCCTGACGGACAGGGCAAGCTCGCGGTCGCATACTATGGCCTCGGC
TTTCAGGACCCGCGGTGGAGCAGCGCCTCCCCGAGGTCTTCCTTCGTTTG
GGACATCAACAGCCCCAATAGGCCCGATGTGGAGCTCTCGCCCCCCTCCC
CGCTCACCTCCCTCCGCTTCAACCCCAAGGCTCAGGCGGGGCTGGAGGAA
GCGGGGCGGGGCAGGGAGTGGTGGGCGAGGCGTCTCTTCTGGAGCATTCC
CACCATGACCCCGTCCGGGATGTTTTCTGGATCAGCAGCAAGACCGGTCA
TCAGTGCGTCTCGATCTCGACCGATGGTCAAATGCTTTGGTGGGATACGC
GCCACCTAA
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protein sequence of rna10078

>rna10078-protein ID=rna10078-protein|Name=rna10078|organism=Nannochloropsis gaditana|type=polypeptide|length=104bp
MVEPEHTIRVESKPILLSPITSSYKQESETDVERSWKGELLHCHCFGLRR
RFHSGCRFCDLTVAVGNLSKRRETHASTLLLIFPYQKKVLHIETLFSFKA
IKFF
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mRNA from alignment at KK037261.1:89782..90096-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10078 ID=rna10078|Name=rna10078|organism=Nannochloropsis gaditana|type=mRNA|length=315bp|location=Sequence derived from alignment at KK037261.1:89782..90096- (Nannochloropsis gaditana)
ATGGTTGAGCCCGAACACACAATACGTGTTGAAAGTAAGCCAATTCTACT
CAGCCCCATCACCTCGTCATACAAACAGGAGTCTGAAACTGATGTAGAAA
GATCTTGGAAGGGGGAACTACTACACTGTCACTGCTTTGGCCTGCGCCGA
CGCTTTCATTCAGGCTGCCGTTTCTGCGACTTGACCGTTGCAGTCGGAAA
CTTGTCGAAACGCCGAGAGACCCATGCCAGCACCCTCTTGCTCATTTTTC
CATATCAGAAAAAAGTGCTTCACATCGAGACCCTTTTTTCCTTCAAAGCG
ATTAAGTTTTTCTAA
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Coding sequence (CDS) from alignment at KK037261.1:89782..90096-

>rna10078 ID=rna10078|Name=rna10078|organism=Nannochloropsis gaditana|type=CDS|length=315bp|location=Sequence derived from alignment at KK037261.1:89782..90096- (Nannochloropsis gaditana)
ATGGTTGAGCCCGAACACACAATACGTGTTGAAAGTAAGCCAATTCTACT
CAGCCCCATCACCTCGTCATACAAACAGGAGTCTGAAACTGATGTAGAAA
GATCTTGGAAGGGGGAACTACTACACTGTCACTGCTTTGGCCTGCGCCGA
CGCTTTCATTCAGGCTGCCGTTTCTGCGACTTGACCGTTGCAGTCGGAAA
CTTGTCGAAACGCCGAGAGACCCATGCCAGCACCCTCTTGCTCATTTTTC
CATATCAGAAAAAAGTGCTTCACATCGAGACCCTTTTTTCCTTCAAAGCG
ATTAAGTTTTTCTAA
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Synonyms
Publications